Acetivibrio clariflavus: Clocl_0924
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Entry
Clocl_0924 CDS
T01661
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clocl_0924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_0924
Enzymes [BR:
ccl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Clocl_0924
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clocl_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_4
AAA_30
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
DEAD
Helicase_RecD
PIF1
HHH_3
HHH
AAA_28
T2SSE
nSTAND3
AAA_22
HHH_2
CbiA
SRP54
AAA
SLFN-g3_helicase
LHH
TK
ResIII
AAA_24
IstB_IS21
MeaB
ATPase_2
NTPase_1
Thymidylate_kin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEV67602
UniProt:
G8LWH6
LinkDB
All DBs
Position
1070071..1072221
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AA seq
716 aa
AA seq
DB search
MEYLSGVVERITYVNEENGFCVIKIKSHGFSDLVTVVGNLAAVNVGSTLKLKGNWKFDSK
YGRQFNAIDYQETVPATIAGIEKYLGSGLIKGIGPVYARRIVKHFKEDTLRVIEENPDAL
LEVEGIGQKRVDMIKKAWAEQKEIKNVMLFLQSNGVSTAYAVKIYKTYGNESINIVKSNP
FRLADDIWGIGFKTADKIAQQLGFEKNSFERCKSGIIYVLNELSNDGHCYLKREQLVAEA
VKMLEAEESLVNATLDRMIEEKIVIFDEDNAVYLPTLYYCETGVAKRIREILSEKSKISA
INIDRIVTRIQEEYNISYDEVQLEAIRTAAASKFMVLTGGPGTGKTTTTLAIIKVYQKMG
LKVLLAAPTGRAAKRMSETTGMEAKTIHRLLEFKPAEGYQKNSENPLDCDVLIIDETSMV
DIVLMYNLLKAVANETIVILVGDVDQLPSVGAGNVLKDIIDSGIVKVIKLTRIFRQALGS
AIITNAHRINKGEMPILKGGRNSDFFYIQEEEPTKIAETIKSLCSKRLPDYYKVDPINDI
QVLCPMQRGEVGAQNLNNILQEALNPGDVTIKYGGTIYRLKDKVMQVKNNYDKNVFNGDI
GIISRIDMEDKTVTISFDGNEVEYDATELDEIVLAYATTVHKSQGSEYRIVVAPFTMQHY
MMLQRNLLYTCVTRAKSVFVLVGSKKAIGIAVSNSKIQQRNTMLAKRLQEENKATM
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaatatttaagtggagttgttgaacgaattacatatgtaaatgaggaaaacgggttt
tgtgtcataaaaataaaatcccatggtttttctgaccttgtaaccgttgtggggaatctt
gcggccgttaatgtcggttcaacacttaagttaaaaggaaactggaagtttgacagcaaa
tacggcaggcagtttaatgccattgactatcaggagacagttccggctaccatagcaggg
atagagaaatacctgggcagcggcctgataaaaggcataggtcctgtttatgcccgtcgc
attgtcaaacattttaaggaagataccctccgagtaatagaagaaaatcccgatgctctg
cttgaagtggaaggcattgggcaaaaacgggtggatatgattaaaaaagcctgggcggaa
cagaaagaaataaaaaacgttatgctctttctccaaagcaatggggtatcgacggcctat
gctgtaaaaatatataagacttatggaaatgagagtataaacatcgttaaaagcaaccct
ttccggcttgctgacgatatatggggaatcggttttaaaaccgctgataagatagctcaa
cagcttggttttgagaaaaactcctttgaacgttgcaagtcggggattatttatgtgctg
aacgagctttcgaatgacggacattgttatttaaaaagggaacagcttgtggctgaagca
gtgaagatgctcgaagcagaagagagtttagtaaatgccacccttgacaggatgattgag
gagaaaattgtaatattcgatgaagataatgccgtttatcttcccaccctttattactgt
gagaccggtgttgccaaaagaattagggaaattctctctgagaaaagcaaaatatcagca
attaatattgatcggatagttacccggatccaggaggaatacaatatatcctatgatgaa
gttcagttggaggctattagaactgcagctgcttcaaagttcatggtattaaccggagga
cccggtacagggaaaactacaactaccttggctattattaaagtatatcaaaagatggga
ttgaaggttttgctggcagcacctacaggccgtgcagctaaaagaatgtctgaaactaca
ggcatggaagctaagaccatccatcgtcttcttgaattcaaaccggctgaaggataccaa
aaaaattctgaaaatcctttagattgcgatgtattgattattgatgaaacttctatggtg
gatattgttctaatgtacaaccttttaaaagctgtggccaatgaaacaattgtgattttg
gtgggggatgtggatcaactgccgtcagtgggagcgggaaatgtactcaaggatataatc
gattccggtattgtaaaggttatcaaactaacgaggattttccgccaggctttgggaagt
gccattataacaaatgcccatagaattaacaagggagagatgcccatattaaaaggtggg
cgaaacagtgattttttctacattcaggaagaagaaccgactaaaattgctgagacaata
aaaagcctgtgttccaaacgtttacccgattattataaggttgatcccataaatgacata
caggtgctgtgtccaatgcagagaggggaagtgggggcacaaaacctcaacaatatcttg
caggaagctttaaatcccggtgatgtgacaataaagtacggcggtacgatataccgctta
aaggacaaagttatgcaggttaaaaataattacgacaaaaatgtctttaatggtgatata
ggtataataagcagaattgatatggaggacaaaacggtaacaataagttttgacggaaat
gaagtagagtacgatgccaccgaactggatgagattgtgctggcctatgccactactgta
cataaaagccagggcagtgaatacagaatagtagtagccccctttacaatgcagcattac
atgatgctgcaaagaaatttgttatatacatgtgtgaccagagccaaaagtgtattcgta
ctggtgggctcaaaaaaagcaataggaattgccgtgtccaacagtaaaatacaacagcgc
aatacaatgctggcaaaaaggcttcaagaagagaacaaagcgacaatgtaa
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