Chondrus crispus (carragheen): CHC_T00001221001
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Entry
CHC_T00001221001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_61
Motif
Other DBs
NCBI-GeneID:
17326376
NCBI-ProteinID:
XP_005718656
UniProt:
R7QMN8
LinkDB
All DBs
AA seq
1057 aa
AA seq
DB search
MVTFSVRACTVLQRRHKKCWISLRNTYTVPPPSPSPPCLLPGRHPLFTTNRTPKHASSNA
PMPRGVTLQVPHRTAHPHRSSTPSHRDTRNHIIQGIQRAHASIRHPPRAAAHVHTHAPFI
VPLHRAPSSFKRLRHCRCTSQYRSSPPSRRDSRNHIIQPTAHRHRRIAQPKPQYTVQAHR
FDASCDMPTSLCLSLSPPLRRRFVAARPPLPHILRSWRAPSSPPPPAQAARRRPCPSSRP
RAWHGWRSSLPPPSQPISPPPWSRCRARFCSSRSSPRRPTPPPPPPLRPGRSRVPRRPSP
PPHGSPTSARTRPRATSPPHASAAASTSPACRAARTRAWCASTSPRRRSSTARRSTLSTT
RARTVSRCPRTTGAATATSRPTRATSRRATGRSWRTRSCRRAAAVDARAVPDEPAAARDE
RGAGGPAPPFSEGARHVYLPQGSADFVAQTSRDVNRLTYALILRLDPGRLYPNVTREELH
AGSTEREAAPLFEAFPELRAGERLVFRREMRDDEETDLVCTPRFTAGAKLSNGAHERVYR
HLRQEAYKRYGVQEPDFARVGQTAFPQPPKRIVVLQRHVTRPLENIDELETALREKFEGD
GVEVEVVSTDKLNTAEDFVRIFARAGVLITPHGSQSMGQIWMPRHRPWRGVRRVVRAEDR
AGARPVPEDEEGRRDRARAGGAAHRALRAWEDGARRRVVGGACKAGGGRSGGGGGRAGRG
RRGGGGRWGRGGRRGRGGQWGRGGRRGRGGRRGRGGRGGERVRRDGRRCGVGQEGDQWCI
WHCGGVSRQRAFISSRSTPHYSSVLTRTPFPIRLPTPRLRQCGKAPHLQPQKVAEIDSPK
LELMVPAGVPARVPIWQLSFSPLFHGASGDAFGDASGRSSPSLDGACSDASGRSSPSLDG
ACSDAFGDASRRGSPSFRGACSDAFGDALRRGSPSFRGACSDAFGDALRRGSPSFHGAYR
VRCSRAALRSQVRRVGRGKASPRGPISQLSFSPRSRALGGQNHCALRRGTCGAPERRTGK
CHCSNLSRMMASTISFRHRKGEVRESDARFFKKYIFN
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggttacatttagcgtacgggcatgtacagtcctccaacggcgacacaaaaagtgttgg
atatcgctacgtaatacatatactgtaccacccccctccccctctcctccatgtctcctg
cccgggaggcacccccttttcaccacaaacagaacaccaaaacatgcgtcatccaacgcg
cccatgcctcgaggcgtaaccttacaagtacctcaccgtaccgctcatccacaccgctca
tccacaccgtcgcaccgcgacacccgaaaccacattatacaaggcatccaacgcgcccat
gcctcgatacggcatccgccacgcgctgcagcacacgtacacacacacgccccattcatc
gtgccccttcatcgtgccccttcatcgtttaaacgcctccgacactgccgctgtacctca
cagtaccgctcatctccaccgtcgcgtcgcgactcccgaaaccacattatacaacctacc
gctcatcgacaccgtcgcatcgcgcagccgaaaccacagtatacagtacaagcccaccgc
ttcgacgcgtcgtgcgacatgccgacgtctctgtgcctttccctttcgccgccgcttcgt
cgccgcttcgtcgccgcccgccctccccttccccacatccttagatcatggcgcgccccg
tcctccccacctcctccagcccaggcggcaaggaggcgtccctgcccttcttcacgacct
cgcgcctggcatggctggcgatcgtcattgccgccgccatcgcagcccatctctccgcca
ccgtggtcacgctgccgcgctcgattctgcagttctcgctcgtcaccccgccgtccaacg
ccaccaccaccaccaccactgcgtcctggtcgctcgcgcgtgccgaggcggccaagtccg
cctccacacgggtcgcccacctccgcgcgcactcgcccgagggcaacgtctccaccacac
gcgtcggctgccgcgagtacgtcgccggcgtgcagagctgcgcgtacgagggcctggtgt
gcgtcaacgtcaccacggaggaggagttcgaccgcccgaaggtctactttgtcgacgact
cgcgcccggacagtgagcaggtgcccacggacaactggtgcggctaccgccaccagtcgt
ccgacccgcgctacttctcgtcgcgccactggccgatcatggaggacacgttcgtgccgc
agggcagctgccgtggacgcgcgcgcggtgccggacgagcccgccgcggcgcgcgacgag
cgcggcgcgggcgggccggcgccgcccttctccgagggcgcgcggcacgtgtacctgccg
cagggctcggcggactttgtggcgcagacgtcgcgcgacgtgaaccggctgacgtacgcg
ctgatcctgcggctggaccccgggcggctgtacccgaacgtgacgcgggaagagctgcac
gcggggtcgacggagcgggaggccgcgccgctgttcgaggcgttcccggagctgcgcgcg
ggggagcggctggtgttccgccgcgagatgcgcgacgacgaggagacggacctcgtgtgc
acgccgcggttcacggccggcgcgaagctctccaacggggcgcacgagcgcgtgtaccgg
cacctgcggcaggaggcgtacaagcggtacggggtgcaggaacccgactttgcgcgggtc
gggcagacggcgttcccgcagccgcccaagcggatcgtggtgctgcagaggcacgtgacg
cgaccgctcgagaatattgacgagctggagacggcgctcagggagaagtttgagggtgac
ggggtggaggtggaggtggtgtcgacggacaagctgaatacggccgaggactttgtgcgg
attttcgcgagggccggggtgcttatcacgccgcacgggagccagagcatggggcagata
tggatgcccaggcatagaccatggcgaggagtacgacgagttgtgcgggcagaagaccgg
gcaggtgctcgacccgtgcctgaggatgaagaaggtcggcgtgaccgtgcacgtgcagga
ggcgctgcgcaccgtgcgcttcgcgcttgggaggatggggcacgccgtcgggtcgtgggc
ggagcatgcaaggcggggggcggacggagcggcggcggaggcggaagggccgggcgaggg
cgccggggaggaggaggacggtggggaagaggagggcggcgaggaagaggagggcagtgg
ggaagaggagggcggcggggacgaggaggacggcggggacgaggaggacggggaggagag
cgagtgaggagggatgggcgcagatgcggagtcgggcaggagggtgaccagtggtgcatc
tggcactgcgggggcgtgtcacgacagcgtgcctttatctcaagcagaagcaccccgcac
tacagctccgttttgacgcgcacgccttttccgatccgccttccgaccccccgcctccga
cagtgcgggaaggccccgcacttgcagcctcagaaagttgctgagatcgattcccccaag
ctggagctcatggttccggctggggttccggctcgggtaccaatatggcagctttctttt
tcgcctttgttccatggtgcttccggtgatgctttcggtgatgcttcggggcggagctcg
ccttcgctcgatggtgcttgcagtgatgcttcggggcggagctcgccttcgctcgatggt
gcttgcagtgatgctttcggtgatgcttcaaggcggggctcgccttcgttccgtggtgct
tgcagtgatgctttcggtgatgctttgaggcggggctcgccttcgttccgtggtgcttgc
agtgatgctttcggtgatgctttgaggcggggctcgccttcgttccatggtgcttaccgg
gtgcgctgctctcgggctgcattgaggtcacaagtgcgccgagtgggacggggcaaggct
tcgccacgaggaccgatatcccagctttctttttcgcctcgaagcagagcgttggggggg
cagaatcactgcgcgttaaggagaggaacatgcggagcgccggagaggagaacggggaaa
tgtcattgcagcaatttatctcgcatgatggcaagcacaatctcttttcgccaccgcaag
ggagaggtgcgagagtcagacgcaagattctttaaaaagtatatttttaattaa
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