Chondrus crispus (carragheen): CHC_T00004705001
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Entry
CHC_T00004705001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14004
protein transport protein SEC13
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03013
Nucleocytoplasmic transport
ccp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHC_T00004705001
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHC_T00004705001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00004705001
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00004705001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHC_T00004705001
Membrane trafficking [BR:
ccp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
CHC_T00004705001
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CHC_T00004705001
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
CHC_T00004705001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
17323914
NCBI-ProteinID:
XP_005716197
UniProt:
R7QF23
LinkDB
All DBs
AA seq
359 aa
AA seq
DB search
MAMMPPPMVPQPMPPTHAPTPSPLGPPTSQEKTPPKSVIDTAHADMVHDAQLDFYGRRLA
TCSSDRTIKIFHVDRNGAHRPEATLEGHTGPVWQVAWAHPTRHGRPMLASASHDGRVIVW
IEDAPGMWRNFYEYAWHASSVNSVAFAPHEYGLIFACASSDGFVSICSQLQDGTWDERRV
SESRDGGAHTHPLGANSVAWGPAITPGGLWMPERATPPPMRIVTAGCDHLIKIWKFDNDA
NNWLLDGEPLKGHREMVRCVSWAPNVGLPRSIIASAGQDKKVILWNQELESDTSKAEWTK
TELPAFAGPVWSVSWSPTGSVLGVAYGDDKVTLWKQELDGSWKNVTDVTAEGTAVPESS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgccgcctccaatggtgccgcagccgatgccacctacgcatgccccgacg
ccctctccgctgggaccaccgaccagccaagaaaagacccctccaaaatctgtcatcgac
actgcgcatgccgacatggtgcacgacgcccagctcgacttctacggccgccgcctcgca
acctgctcgtctgaccgcactatcaaaatctttcacgtcgatcgcaacggcgctcaccga
ccggaagccacactcgaaggccatactggacccgtttggcaggtcgcctgggcacacccg
acgcgacacggccgaccgatgctcgcctccgcctcgcacgatggccgcgtcatcgtatgg
atcgaagatgccccgggcatgtggcgcaatttttacgagtacgcatggcacgcctcctct
gtcaactcggttgcctttgccccacatgagtacggtctcatttttgcgtgcgcatcgtcg
gatggcttcgtctccatctgctcccagctgcaggatggcacttgggatgagagacgcgtc
agcgaatcgcgggacggcggcgcacatacgcatcctcttggtgccaattcagttgcgtgg
ggacccgctattacgccaggcggtttgtggatgccagagcgtgccacgcccccgccgatg
cgaattgtcacagcgggctgtgatcacctgatcaagatctggaagtttgacaatgacgcg
aacaattggttactggatggggagcctttgaaaggtcaccgtgagatggtgcggtgtgtg
tcttgggccccgaatgttggtcttcctcgctcaatcattgctagcgcagggcaggataag
aaggttattttgtggaatcaagagctcgaaagtgacacctcaaaagctgaatggacgaag
accgagctaccagcgttcgcggggccggtgtggtctgttagctggagcccgactgggagc
gtgcttggcgtcgcatatggcgatgataaagtgacgttgtggaagcaggagcttgatgga
tcttggaagaacgttacggacgtcacagctgaggggaccgccgtgccggagtcgtcatga
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integrated database retrieval system
