Chondrus crispus (carragheen): CHC_T00006579001
Help
Entry
CHC_T00006579001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00006579001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CHC_T00006579001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHC_T00006579001
Prokaryotic type
CHC_T00006579001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
17327067
NCBI-ProteinID:
XP_005719341
UniProt:
R7QPW3
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MPITESDVGITEFLSYHRPFRAILKQRINDFVVNEVTRSGKIAKLTRLAQFQSKPSPREH
ETTAADNAGNQSTQPAFEALEACFEEPQRASISDLIRKAIDSQESEVVLPICTDKQRRTA
MHVWVRNNIPQYITDTVTREVDDTQGQAVRLRLKKSCRPWKRRRTDSLFNTDAVDAATYD
PREGKHLPHKHREWREDAPPQVTRQTYVQFVLWKRNKDTMDALNTLSKILRVPSSAFAYA
GTKDKRAVTTQLVQVRGVSESRFAHANRTITRRERGGRSIAVGDVEILPKETKGSLGLGD
LKGNRFTLALRDLDLATEDDRTNVQAAVESVRKHGFVNYFGLQRFGSGVSGTHETGFAFL
RGDFEDVCRRILLPLRLNEWDENGRDGIRPERRQMNDALEKFGKREISAKDLLRVLPKWM
HIETAIVSSFVHDEDHERDRYDYRAAFDKLPRNLRRMYGHAVQSYLWNVIASERIRMCRP
DEQSRMHAIKGDIVLMNPEEKGEMNFETAVRVVSEEEERQKSVSVFQVLIPVLGSEVSLS
HGMPYAERVQGMMEEQKIDLANRLTSDYGMKGTYRPLLSQPEDVEMEIVSYSSSSDVLIE
PYVPTLLGKNRGETFESEIDILNGEKQNTDDTQTAKEKKTRTAADDNRNSNTSAAQRDVI
SDGRVSSPLSHEDSQQLGVDTQGAGIPEEPKKALIIAFTLGRGEFATMLIRELTGQNSST
ANQKALQKAIREDERG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaccgaaagcgatgtcggcattaccgaattccttagctaccaccgccccttt
cgcgcaatcctaaaacagcgcatcaatgactttgtcgtcaacgaggtcacccgctccggc
aagatagccaagcttacccgtttggcccagtttcagagcaaaccgtctcccagggagcac
gaaaccactgcggctgataatgcgggcaaccaatccacacaacctgcgttcgaggcacta
gaagcctgttttgaagaaccgcaacgagcatccatttcagacctcatccggaaggctatc
gactctcaggaatccgaagtcgtgcttcccatttgtactgacaagcaaagacgaacggct
atgcacgtctgggttcgcaacaacattccacaatacatcaccgacacagtgacgcgtgag
gttgacgacacccaaggacaggccgtccgactgcgcctcaagaaatcttgccgcccctgg
aagcgccgccgcaccgactccttgttcaacaccgatgccgtcgatgctgccacgtacgac
ccgcgcgagggcaagcacctcccgcacaagcatcgcgaatggcgtgaggatgccccgccg
caagtcacccgccaaacttacgtccagtttgtgctgtggaagagaaacaaagataccatg
gacgccctcaatacgctctccaagatcttacgtgttccgtccagcgcttttgcgtacgcg
gggacaaaggataagagggccgttaccacccagctcgttcaggtgcgaggggtttccgag
agccgcttcgcccacgcgaataggacgataactaggcgcgagaggggtggaagatcgata
gcggttggcgacgttgaaatattgccgaaggagacaaaagggtcgctagggctgggcgat
ttgaaaggaaatcgctttaccctagcacttcgggatttggatttagcaactgaggacgat
cgaacgaatgtgcaagcggctgtggagagtgtgcgcaagcacgggttcgtcaattatttt
ggcttgcagaggtttgggtcgggtgtgtctgggactcacgagactgggttcgcgttcctg
cgcggtgattttgaggatgtgtgtcgcaggatattgctgccgttgcgactgaacgagtgg
gatgaaaatgggagagatggcatcagaccggagcgtcggcaaatgaatgatgcactcgag
aaatttgggaagagggagatatcggctaaggatctcttgagagtgctgcccaaatggatg
catattgagacggccatcgtctcatcgtttgtccatgatgaagatcacgagcgggacagg
tatgattacagggctgcctttgacaagcttccgcgcaatttgcggcgcatgtatggccat
gctgtgcagagctatctgtggaacgtgatagcctcagagaggatccgcatgtgtcgtcct
gatgaacagtcccgcatgcatgctatcaagggagatatcgtgctcatgaatccggaggag
aaaggggagatgaactttgagacagccgtgagggtggtgtctgaggaagaagagcggcaa
aaatctgtgtccgttttccaggtactgataccggtgctcggttctgaagtatcactatcg
catggtatgccatacgcagagcgcgtccagggaatgatggaagagcagaaaatcgatctt
gcaaatagactcacctcagactacggaatgaagggtacttacaggcccctactgtcacag
cccgaggatgtggagatggagattgtgtcttattccagttcatctgatgtactaatcgaa
ccatacgtcccaaccttgttgggaaagaaccgaggagaaacatttgagtctgaaattgac
attctaaatggcgaaaagcaaaacacggacgacacacagactgcaaaggaaaagaagact
aggactgccgccgatgataatcgtaactcaaatacctctgcagcacagagggatgtcatc
tcagatgggagagttagctcaccattgagtcacgaggactcgcagcagctgggcgtggac
acgcaaggcgctggaataccagaggaacccaaaaaggcacttataatagcgtttacgctt
ggacgtggggaatttgcaactatgctgattcgcgaactgacgggtcagaatagttctaca
gcgaatcaaaaggcactgcagaaagccatccgcgaagacgagcgtggctaa
DBGET
integrated database retrieval system
