KEGG   Corvus cornix (hooded crow): 104684321
Entry
104684321         CDS       T03546                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104684321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104684321
   03021 Transcription machinery [BR:ccw03021]
    104684321
Transcription factors [BR:ccw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    104684321
Transcription machinery [BR:ccw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104684321
  RNA polymerase III system
    TFIIIB
     104684321
  RNA polymerase I system
    SL1/TIF-1B
     104684321
SSDB
Motif
Pfam: TBP TFIIA
Other DBs
NCBI-GeneID: 104684321
NCBI-ProteinID: XP_010389871
LinkDB
Position
3:41737893..41748112
AA seq 304 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPA
SESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF
RKTT
NT seq 915 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagtttgccaccctacgctcaaggcctagcctcccctcagggtgca
atgactccaggaattccaatttttagcccgatgatgccgtatggcacaggactgacaccg
cagcctgtccagagcaccaacagtctgtccatattggaggaacagcagcggcagcagcag
cagcagcagcagcaagcagcacagcaatccacgtcacagcaagcgacacagggaacgtct
ggtcaaaccccccagctcttccattcacagactcttaccacagcccctttaccaggaacc
acacctctgtacccctctccaatgactccaatgactccaataactcctgcaacaccggca
tcagagagctctggcatagtgccacaactacagaatattgtgtccacagtgaatcttggt
tgcaaacttgacctaaaaactattgcacttcgtgcccgaaatgctgaatataatcccaag
cgttttgctgctgttattatgagaataagagaaccacgtactactgcactgatattcagc
tctggaaaaatggtgtgcacaggagcaaaaagtgaggagcaatccagactggcagcaagg
aagtatgcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaatt
cagaatatggtgggcagctgtgatgtgaaatttcccatcagactggaaggattggtactt
acacaccagcagttcagcagctatgagccggaattgtttcctggcttaatctacagaatg
attaagccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgct
aaagtacgagcagaaatctatgaagcatttgaaaacatctatcctattttaaagggattc
agaaagacaacgtaa

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