Corvus cornix (hooded crow): 104684321
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Entry
104684321 CDS
T03546
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104684321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104684321
03021 Transcription machinery [BR:
ccw03021
]
104684321
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104684321
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104684321
RNA polymerase III system
TFIIIB
104684321
RNA polymerase I system
SL1/TIF-1B
104684321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
104684321
NCBI-ProteinID:
XP_010389871
LinkDB
All DBs
Position
3:41737893..41748112
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AA seq
304 aa
AA seq
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MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPA
SESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF
RKTT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagtttgccaccctacgctcaaggcctagcctcccctcagggtgca
atgactccaggaattccaatttttagcccgatgatgccgtatggcacaggactgacaccg
cagcctgtccagagcaccaacagtctgtccatattggaggaacagcagcggcagcagcag
cagcagcagcagcaagcagcacagcaatccacgtcacagcaagcgacacagggaacgtct
ggtcaaaccccccagctcttccattcacagactcttaccacagcccctttaccaggaacc
acacctctgtacccctctccaatgactccaatgactccaataactcctgcaacaccggca
tcagagagctctggcatagtgccacaactacagaatattgtgtccacagtgaatcttggt
tgcaaacttgacctaaaaactattgcacttcgtgcccgaaatgctgaatataatcccaag
cgttttgctgctgttattatgagaataagagaaccacgtactactgcactgatattcagc
tctggaaaaatggtgtgcacaggagcaaaaagtgaggagcaatccagactggcagcaagg
aagtatgcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaatt
cagaatatggtgggcagctgtgatgtgaaatttcccatcagactggaaggattggtactt
acacaccagcagttcagcagctatgagccggaattgtttcctggcttaatctacagaatg
attaagccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgct
aaagtacgagcagaaatctatgaagcatttgaaaacatctatcctattttaaagggattc
agaaagacaacgtaa
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