Corvus cornix (hooded crow): 104686420
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Entry
104686420 CDS
T03546
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X6
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104686420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104686420
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104686420
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
104686420
NCBI-ProteinID:
XP_020439863
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All DBs
Position
2:5041896..5257072
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AA seq
1868 aa
AA seq
DB search
MELAGFQCYCYGVCRRICECRQCFTSSDFQGIESFKNYFSNPRYITEFVDLGNVSALRTF
RVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRHKCV
RDYTMFNFTNGSFYLDGRMWNNSEEFLSDPVNYFIKNGTEDVLLCGNSTDAGTCPEGYIC
LKAGENPDHGYTSFDTFGWAFLSLFRLMTQDYWERLYQQTLRSAGKIYMLFFMLVIFLGS
FYLINLILAVVAMAYEEQNQATIAETEEKERKFREAMEMLKKEQEALAAKGIDSMSLSSL
EMSPKSGKERRNKRKKKKSLGADEYGEDQRNPKCDYDDGQRRMTLLGISYGPSANLVKRR
TSHGSVFSFRLRGRDACSETDFADDEISIAGENESHRGSLLIPRSGRRPSVQSQVSHSSH
PTTPNYTQTGKRNSSVDCNGVVSLIGGGTGALNPDPTSPAGLLLPPVIMEKPGTGDLTSP
SDEASKKQLLMPHRPSVDHSDEPFQRQRAVSAVSIITSALEELEESHQKCPPCWNHFAVK
FLIWDCCPLWVLIKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHMLYIGN
LVFTGIFTAEMIFKVIALDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLL
RVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYLDNVKKIS
TTGSLPRWHMNDFFHSFLIIFRILCGEWIETMWDCMEVAGQPLCLLVFLLVMVIGNLVVL
NLFLALLLSSFSADNLSAPDEDGEMNNLQLAFARINRGLQYAKKATWNFCCNVLRHPKTT
AEKKAMMKLAAQNPGALNNCVNSHATAELGKDMENHKENHAEDGVNKSGEKHPGITDDDF
MTNPDLSICVPIAVGESDIEEEDEEQSTFTEMEQQEKQLQLRGQRCQSPGVRSQNSEIYE
ELSELHVDKQLKAEPPPPVGQKELDEISLSEGSTVDLTNPAELLEQIPEFAEELMEPEDC
FPEVCVRFFPCCSVDITKFPGKIWWRLRKTCYRIVEHNWFETFIIFMILLSSGALAFEDI
YLEDRKNIKTMLEYADKVFTYIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLISLV
ANTLGYSEMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLI
FSIMGVNLFAGKFGKCINKTEGDMPLDSKIINNMSDCILYNVSGTFYWTKVKVNFDNVGA
GYLALLQVATFKGWMDIMYAAVDSREYEEQPQWESNLYMYLYFVIFIIFGSFFTLNLFIG
VIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDVVSK
QAFDVSIMILICLNMVTMMVETDDQSQEKVNILHKINMLFVAIFTGECIFKMLALRHYYF
TNGWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLL
FALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKMEGGIDDMFNFQTFANSMLCLFQI
TTSAGWDGLLNPILNTGPPYCDPNLPNANGSKGDCGSPAVGILFFVTYIIISFLIVVNMY
IAIILENFSVATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSALSDFADALSEPLRI
AKPNKIKLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALKIQMEEKFMAANPSKI
SYEPITTTLRRKQEEVSAIIIQRAYRRHLFRRSMKQASYLYRHRTLESSILEDDAPEKEG
LIAFMMNENYGRPIDKSETLSSTSFPPSYDSVTRGTSENLQLKITDLSKSDEAIDCLLSP
DKDKESIV
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggaactggctggatttcagtgttattgttatggcgtatgtaggagaatttgtgaatgt
aggcagtgtttcacctcttcggactttcagggtattgagagctttaaaaactatttcagt
aatcccagatacataactgaatttgtggacctgggcaatgtctcagccttacgaacgttc
agagtactgcgggcgctgaaaacaatctcagtcatttcaggactgaagaccattgtaggg
gcacttatccagtctgttaagaaacttgcagatgtgatgatcctgaccgttttctgcttg
agtgtctttgccctcataggcctccagctcttcatgggcaacttgagacacaaatgtgtc
agggattacaccatgtttaacttcaccaatggctccttttacttggatggtaggatgtgg
aacaactcagaggaatttcttagtgatccagtgaactatttcataaagaatggtacagaa
gatgtgttactgtgtggcaatagcactgatgctggcacgtgccctgagggatatatatgt
ctgaaggctggggaaaatcctgaccatggttacacaagctttgatacttttggctgggcc
tttctctccttgttccgtcttatgactcaagattactgggaacgtctttaccaacagact
ctcagatctgctgggaagatctacatgcttttttttatgctggtcatctttctgggttca
ttttatctgatcaacctgattctggctgttgttgccatggcatatgaggagcagaaccaa
gccactattgctgaaacagaggagaaggaaagaaagtttcgggaagccatggagatgtta
aagaaagagcaggaggcactagctgctaaaggaattgattcaatgtcactcagttcattg
gaaatgtcacctaaaagtggaaaagaaagaagaaataagcgaaagaaaaagaaatctttg
ggggcagatgagtatggggaagaccaaaggaatcccaagtgtgactacgatgatggtcaa
aggaggatgactctccttggcattagttatggtcccagtgcaaacttggtgaagcgcaga
accagccacggaagcgttttcagtttccgactccgtggcagagacgcttgctccgagaca
gattttgccgatgatgagatcagcatcgctggggaaaatgaaagccaccggggctctctc
ttaattccaagatctgggaggcgtccaagcgtgcaaagtcaagtgagccatagttctcac
cctactactcccaactacacccagacgggcaaaaggaacagctcagtggattgcaatggt
gtggtttccctgataggaggaggcaccggggcactcaacccagaccctacttctcctgca
gggttactgctccccccagttattatggaaaagcctgggacaggcgacctgacctccccc
tcggacgaggcaagcaagaaacagcttttaatgccccaccggccctcagtggatcactcg
gacgagccctttcagaggcagagggcagtgagtgctgtcagcatcatcaccagtgccctg
gaagagcttgaggaatcacaccagaaatgtcctccctgctggaaccactttgctgttaaa
ttcctcatttgggattgctgcccgctttgggttttaatcaagaaatttgtcaagtttgtg
gtaatggacccatttaccgacctcaccatcaccctctgcattgtgctgaacacgctcttc
atggccttggagcattacaagatgacgaaggagtttgaccacatgctgtacataggcaat
ttggtcttcactgggatttttacagcagaaatgatcttcaaagtaattgcccttgacccc
tactactatttccagcagggctggaatatttttgacagcataattgttattctaagcctg
atggaactgggtttgtccagcatgggaaacctgtctgttttacgctccttccgactgctg
cgagtcttcaagttggcaaagtcctggccgaccttaaatacgcttattaaaatcattggt
aactctgtgggtgccctcggtaacctcactctcgtgctggccatcatcgtcttcattttt
gccgtggtaggaatgcagctttttgggaaaagctacttggacaatgtgaagaagataagc
acaactggcagtttgccacggtggcacatgaatgatttcttccactcgttcctcatcatc
ttccgaattttgtgtggggagtggatcgagaccatgtgggactgtatggaagtagctggg
cagccactgtgccttcttgtcttcttgttggtcatggtgataggaaacctggtggtgctc
aacctgttccttgccttgctgctgagctccttcagcgctgacaacctctcagccccagac
gaggacggggagatgaacaacctgcagctcgcttttgcccgcatcaacaggggccttcag
tatgccaaaaaagccacgtggaacttttgctgcaacgtcctccggcaccccaagaccaca
gctgagaagaaggcaatgatgaaactcgctgcccagaacccaggagccctcaacaattgt
gtgaacagccacgccactgccgagcttggcaaagacatggagaatcacaaggagaatcat
gctgaggatggggtgaataaaagcggagagaagcacccaggaattacagatgatgatttt
atgaccaatcctgacctgtccatttgtgttcctattgctgtgggagagtcagatatcgag
gaggaggatgaggagcagagcacctttacagaaatggagcagcaggaaaagcagctgcag
ctgagggggcagcgatgccaaagcccaggcgtccggagtcagaactctgagatttatgaa
gagttaagtgagttgcacgtggataagcagttgaaggctgagccaccacctccagtaggg
caaaaagagcttgatgaaatcagtctttctgaaggcagcacagtggatttgacaaatcct
gcagaactgctggagcagatccctgagtttgctgaggagctgatggagcctgaagattgc
ttccctgaagtctgtgtgcgattcttcccgtgctgttcagtggacatcacaaaatttcca
ggcaaaatttggtggaggctgcgaaagacctgctacagaatcgtggagcacaactggttt
gaaacgttcatcatcttcatgatcctgctgagcagtggagccctggccttcgaagatatt
taccttgaagatcgaaaaaacataaaaaccatgctggaatatgctgacaaagtattcact
tacatctttgttttggaaatgctcctgaagtgggtggcttatggcttcaagaagtatttc
accaacgcctggtgctggctggacttccttattgtagatgtgtctttaatcagcctcgtt
gccaacactcttggatactccgagatggggcccatcaaatccctgcggaccctccgggcc
ctgcggccgctgagggcattgtcacggtttgaagggatgagggttgtggtcaatgccctt
gtgggagccatcccttccatcatgaatgttctgctcgtctgcctcatcttctggctcatc
tttagcatcatgggagtgaacctctttgctgggaagtttgggaagtgcatcaataagaca
gaaggagatatgcctttggactctaaaattattaacaacatgagtgactgtatactttac
aacgtgtcgggcacattttactggacaaaagttaaagttaacttcgataatgttggtgct
gggtacctggctctgctacaagtggccacatttaaaggctggatggatatcatgtatgca
gcagtggattcaagagagtacgaggagcagcctcaatgggaaagtaatttatacatgtat
ctttactttgtgattttcatcatcttcgggtctttcttcacattgaacctcttcatcggt
gtcatcattgacaattttaaccaacaaaagaaaaagttaggtggccaggacatctttatg
acagaagaacaaaaaaagtattataatgcaatgaaaaagctgggatctaagaaacctcaa
aagccaatcccaaggccgctgaacaaataccaaggttttatttttgatgtcgtctcaaaa
caagccttcgatgtctccatcatgatcctcatctgccttaacatggttaccatgatggtg
gaaacggatgaccagagtcaagaaaaagtgaacatcctccataaaatcaacatgcttttt
gttgccatcttcactggggagtgcatcttcaaaatgctggctctgcgacactactacttc
accaacggctggaacatatttgactttgtggttgtgattctgtccatcgtaggcactgta
ctttctgacatcatccagaaatatttcttctctcccacactcttcagagtcattcgtttg
gctcggattggccggatcctgagactcatccggggagccaaaggaattcgaactctcctg
tttgccttaatgatgtccctacctgctctgttcaacattggcctcttgctgtttctggtc
atgttcatttatgccatttttggcatggctaactttgcctatgtgaagatggaaggtggc
attgacgatatgttcaacttccaaacctttgctaacagcatgctctgtctcttccaaatc
accacatcagctggctgggatggtcttctcaaccctattttaaacaccggaccaccgtat
tgcgacccaaaccttcccaatgcaaatggttcaaagggagactgcgggagccctgccgta
ggcattttattctttgttacatatatcattatatcatttctcattgttgtaaacatgtat
atagccattattttagagaacttcagtgtagccactgaggaaagtacagagcctctaagc
gaggatgattttgatatgttctatgaaatctgggagaagtttgaccccgaagccactcag
tttattgagtattctgcactttcagactttgcagacgcgctgtcagaacctttgcgcata
gcgaaaccaaacaaaatcaaactcatagcgatggacctgcccatggtcagcggagacagg
atccattgcttggatattttgtttgcttttacaaaaagggtgctaggagaatccggagag
atggatgcccttaaaatacagatggaagaaaagttcatggcggcaaatccgtctaagatc
tcttacgagccgattacaacgactctgagacggaagcaagaagaggtctccgccatcatc
atccagagggcctacaggagacatttgttccggcgctccatgaagcaggcatcctacttg
taccggcacagaactttggaaagcagcatcctggaggacgatgcgcccgagaaggagggt
ctcattgcgttcatgatgaacgaaaactacggcaggccaatagacaaatcagaaactctg
tcctccacctctttccctccatcctatgacagcgtcaccaggggcacgagtgaaaacctt
cagctgaagataacggacctgagcaaaagcgatgaggctatagattgtcttctctcaccc
gacaaggataaagaatcaattgtttaa
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integrated database retrieval system
