Corvus cornix (hooded crow): 104688322
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Entry
104688322 CDS
T03546
Symbol
TSC1
Name
(RefSeq) hamartin isoform X5
KO
K07206
tuberous sclerosis 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04140
Autophagy - animal
ccw04150
mTOR signaling pathway
ccw04218
Cellular senescence
ccw04910
Insulin signaling pathway
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104688322 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104688322 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
104688322 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104688322 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104688322 (TSC1)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
104688322
NCBI-ProteinID:
XP_019140500
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Position
17:4002597..4029493
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AA seq
986 aa
AA seq
DB search
MSQGHVAEIYLVHLHASVYSLFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEH
VRIHPELVTGSKDHELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSVSRKLCTSL
KHHQTDPSASSYIDTQSSYGTSTPYSTPRLTLSQMPGQLPQILSPQSTRLSTEPQQVTIW
SPSAVCGMTTPPTSPGVVPSESSQSASQPYSKAFGSSAGGKGTPLGTPATSPPPPCTSDD
FVSLPSAAATPPKKEDKPDSGRPLLYRQQNVTNSDKSLDIPSSKSSVTLSDLAEFLGGLS
FEDSAEKDREEDAISKEISEITTDAEHMVPRGGFDSPFYHTNESLSGSQKKTHSAASSVQ
GHSQTSEPLTSLDKPGPEGARETPKQTFTPIDKPCGGPGESPAGNREGTSGEPSILTPSP
CKVPAQRRVVFGSGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKTKGTQDEDCMSSTSP
VEVLDRLIQQGADAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYE
RFKRQQHALRNRRLLRKVIKATALEEHNAAMKDQLKLQEKEIQALKLSLQKEQARYHQFQ
EEHDNIVAQLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIADLRLELKKANNKVCHTE
LLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKEVEMLHAAFR
KELEKAKLCVQQQSQRLDASQKRIAELESQLAKKDHLFLEQKKYLEDVKIQARGQLQAVE
SRYKAQKRITQAFELEILDLFGRLEKSSLLKKLEDDKTEAAEAAEESRLDCANEDTAGHS
EETMGRNGETKPPSTRGSSSSKGGSSSELSTPEKPQNQRLSSRWETSVLLEPSTTVPLTV
GSLPSSKSFLGMKARELFRNKSESQCDEEGVTINRLSDALKTELCKDPSMESKSPPSPDN
LSPKLQESSVGQLHIMDYNETHHDHS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaggtcatgtggcagagatttatcttgtccatcttcatgccagcgtttattct
ctctttcatcgtctctatggaatgtacccttgcaattttgtctcctttctgcgctctcac
tacagtatgaaggaaaacctggagacctttgaagaagtagtcaagccaatgatggaacat
gtgcggattcatccagagctagtgactggatctaaggaccatgaactggacccacgaagg
tggaaaagactagaaactcatgatgttgtgatagaatgtgccaaaatctccctggaccct
gcagaagcctcgtatgaagatggttattactctgtgtctcggaaactctgcacaagctta
aaacatcatcaaactgaccccagtgccagctcttacattgacacacagagcagctatggg
acttctaccccatattccactcctcggctaacactatcacaaatgccagggcagctacct
cagattctgagcccacagtccacgaggctgtcgactgagccacagcaggtcaccatctgg
agcccttctgcagtgtgtggtatgaccacgccaccgacatcccccggcgttgtcccatca
gagtcatcccagtctgcatcacagccctacagcaaagcttttggctcatctgcagggggg
aaaggaacacctttgggaacaccagccacatctcctcctccaccctgcacttcagatgac
tttgtttcactcccttcagctgctgccacacctcctaaaaaggaggacaaaccagattct
gggaggcctttactgtaccgacagcaaaatgtcacaaacagcgataaatcattggacata
cccagtagtaaaagttcagtaaccttaagtgatcttgcagagtttttaggtgggttgtcg
tttgaggatagcgctgagaaggacagagaggaagatgcaatatctaaagagatctccgag
atcacgaccgatgctgaacacatggtgcctagaggaggatttgactccccgttttaccac
acaaacgaaagtctgtcaggctctcagaagaagactcactcagcagcctccagtgttcag
ggacacagtcagacctctgagcctttaacatctctcgacaagcctgggcctgagggtgca
cgggaaacacccaaacaaacctttactcccatagacaagccctgtggaggccctggggaa
agccctgctgggaacagggaaggaacctctggggagccgagtattctcactcccagccct
tgcaaagtaccagcacaaaggagagtggtgtttgggagtgggcagcctcccctctatgag
cacctcttcgaggttgcattaccaaagactgcctacctctttgttggcaagaagactgag
gagctgctaaagaaaaccaagggaacccaggatgaagactgtatgtcctcaacttctcct
gtggaagtgctggacaggctgattcagcagggagcagatgcacacactaaggagctgaac
aaattgtctctgccgagcaaatctgctgactggactcactttggaggttctcccccctca
gatgagattcacaccctgaggaaccaactgcttctgctgcacaaccagttgctgtacgag
cgcttcaagaggcagcagcacgcgctgcgcaaccgccggctgctgcgcaaagtcatcaaa
gccacggctctggaggagcacaacgctgccatgaaagatcagctgaaactgcaggaaaag
gagatccaggccttgaaactgagtctgcagaaagaacaagcaaggtaccaccagtttcag
gaggaacatgataacattgtggctcagcttcacagccagatccgacagctgcagcacgac
cgggaggaattctacaaccagagccaggaattgcagaccaagctggaagactgcaggaac
atgatagcagatctgaggttggaattgaagaaggccaacaacaaggtgtgtcacactgaa
ttgctgcttagtcaagtttctcaaaagctttccaacagtgaatcggtgcaacagcagatg
gagttcttgaacaggcagctgctggttcttggggaggtcaatgagctgtacctggagcag
ctgcagcacaagcacacagacactacaaaggaggttgaaatgttgcacgctgcttttcgg
aaagaactggagaaagcaaagttgtgtgttcagcagcaaagccaaaggcttgatgcttcc
cagaaaaggatagctgaactggaatctcagcttgcaaaaaaggaccacctcttcctcgag
caaaagaaatacctggaagatgttaaaatccaagcaaggggtcagctgcaggcagtggaa
agcaggtacaaggcccagaaaagaatcacccaggcatttgagctggagatcttggatctg
tttgggaggctggagaagagcagcctactgaaaaaacttgaagatgataaaacagaagca
gctgaagcagcagaagaaagcaggctggattgtgctaatgaagatacagcaggacacagt
gaagaaaccatgggtagaaatggagagaccaaacctcccagcacccgaggcagcagtagc
agtaaggggggcagcagcagcgagctctccaccccagaaaaaccccagaaccagaggctg
agcagtcgctgggagacgtcggtgttgctggagccctcgactactgtcccactgactgta
ggttcactccccagctccaagagcttccttggaatgaaggcacgagaattatttcgcaac
aagagtgagagccagtgtgatgaggagggggtcaccatcaacaggctgtctgatgcccta
aagactgaactatgtaaagatccaagcatggagtcaaagtctcctccaagccccgataac
ctctcacctaagctccaggaaagcagtgttggacagcttcatatcatggactacaatgaa
actcatcatgaccacagttaa
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