Corvus cornix (hooded crow): 104689278
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Entry
104689278 CDS
T03546
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104689278 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104689278 (EXOSC7)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104689278 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104689278 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104689278
NCBI-ProteinID:
XP_039404534
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Position
2:complement(33741570..33762400)
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AA seq
290 aa
AA seq
DB search
MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRLSVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEESLGTSRPKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggcggagaagctctacatcgtgcacggcgtgcaggaa
gatcttcgtgtagatggtcgaggttgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaactctcctgagttggaaggccggggaggagaagaactt
ggcacagatatagcaaatacgctgtacagggtattcagctgcgagaacagtgtagacttg
aaatccctttgtatcaatcccaaagagcactgctgggttctctatgtggatgtattgtta
ttggaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaaggatacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgactcagtgtagatgaggtgccctgtattgtc
acactaagcaaaattggatataggcatgtggtggatgctacccttcaggaagaagcctgt
tctttggcaagcctgcttatttctgtgaccagtaaaggtgccatcacttctatgaagaaa
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagagtttgggg
acctcaagaccaaaagttggatttctaggatga
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