Corvus cornix (hooded crow): 104694194
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Entry
104694194 CDS
T03546
Name
(RefSeq) tubulin polyglutamylase TTLL4 isoform X3
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104694194
04812 Cytoskeleton proteins [BR:
ccw04812
]
104694194
Enzymes [BR:
ccw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
104694194
Cilium and associated proteins [BR:
ccw03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
104694194
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
104694194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
104694194
NCBI-ProteinID:
XP_019146135
LinkDB
All DBs
Position
7:15589922..15628602
Genome browser
AA seq
1084 aa
AA seq
DB search
MTDVLVPHVLWLYMASAGPDHANLGPKQQKSIGLASGTLLAERPQLCWTWRLAQQQAKPV
WNLEKRYVSAFQDRMLLPSGIPLQQSCFLRSPLLCHVQPTEDTLCSPPDTGSVTGRVMSS
MLMEPCLLAEERPGAGVKGSALSSGQQAASSCRPVLSNSSFLRPSSAKVPFLQSLKIKKV
ENTRSFPAASQSHSGDTGDTRDNFPSSLINRAVMNGNLVSEENTIPSLTPVPSSVILRKD
QCSWEDAKGRLHSSKEKEPEKSLLKAVQQLPSQAATGKGFGCQVESSGLMNVGNLSNWNS
RRRQHVGAQITRKESITPLNLELGSHRLNSNLSLTGTCGAIAHTKQISPHSLASGAGAPD
CSTGCRPVGVLSPQCAGDRVVKTEPLHSSAISEVAAQVSTIQLEKEEKQAQAVVPGKLNA
TAEKSLLEPSHPHDEAEEELPDGLDESCSQEEYEDSDSDASSDADESSSGSVTPVSRNCI
ECLAEPAEAQDKVLKPALVCSLFPNVPPTIYFSTRDETVEKLPWEQRKLLRWKMCRVTPN
IVKQTIGRSHFRVSKKSNDWLGCWGHHMKSPGFKAIKEHQKLNHFPGSFQIGRKDRLWRN
LLKMQARCGKKEFNFFPQSFILPQDIKLLRKAWEEGASRQKWIVKPPASARGIGIQVIHK
WSQLPKRRPLLVQRYLHKPYLIGGKKFDLRLYVYVTCYDPLRVYLFKDGLVRFASCKYSS
SMDSLSNKFMHLTNYSVNKKNTEYKSNSDETACQGHKWALKALWSYLTQKGVNSEAIWEK
IKDIVIKTIIASEPYVNSLVKMYVRRPYCCHELFGFDIMLDENLKPWILEVNISPSLHSN
SPLDVSIKGQMIRDLLNLAGFVLPSMDSVASRTQIRSGSTCSLGNALKEKPKPVSEHFRA
EKMKKAYYLMQKIPDQDFYSSVLDILTPDDVRILVETEDEYSRRGQFERVFPSHISMRYL
RFFEQPRYFNILVTQWELKYYLNRHKGLELLKNWCVKGYHTGAGTDLAQMWSLPKSFFLQ
TSSIQSNSFSKLELGRLGTCLSSAGEDLTRCLEPSPTQSLPLNKCTGGADQRPAGCLSDT
TLVM
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtgcttgtacctcacgtgctatggctctacatggcgtctgcaggaccagac
catgctaatctgggccccaaacagcagaagagcattgggctggcatcaggcacccttctg
gcagaaagacctcaactgtgctggacctggcggctcgctcagcagcaggcaaaacccgtc
tggaatttagagaagagatatgtgagtgctttccaggatcgcatgctgctgccctcgggg
atccctctgcagcaatcctgcttcttgcgttcaccattgctatgccatgtgcagcccact
gaagacaccctctgcagccctccagacactggctctgtcacgggaagggtgatgtcttcc
atgctgatggagccctgcctgctggcagaggagcgtcctggggctggggtcaaaggctct
gccctcagctcaggtcagcaggctgccagctcctgtagaccagtgctcagtaacagctcc
ttcctacggccaagcagtgctaaagtgccttttctgcagtcactgaagattaaaaaggtg
gaaaacacccggagttttcctgctgcttcacagtcccactctggggacactggggacact
agagacaacttccctagcagcctgatcaacagagcagtgatgaacggcaaccttgtgtca
gaagaaaacacaatcccctcccttacccctgttccaagcagtgtgatcctcaggaaggac
cagtgctcgtgggaggacgctaaggggagacttcacagctcaaaagagaaagaaccggag
aagagcctcttgaaggctgtgcagcagctacctagtcaggctgccacaggcaaaggcttt
gggtgccaagtcgaaagttctggccttatgaatgtgggcaacctgtccaactggaacagc
aggaggaggcagcatgtcggagcgcagatcacccggaaagaaagcatcactcccctgaac
ttggagctggggagccatcgccttaacagtaacttgagccttacaggcacctgtggggcc
attgcccacactaagcagatcagcccccattccttggcctcgggtgctggcgctcccgac
tgcagcactggctgccgtcccgtgggcgtgctgagccctcagtgtgctggggaccgggtg
gtgaaaacagagcctttgcactcgtctgccatctctgaagtggcagcacaggtgtccacc
atccaactggagaaagaggagaagcaggcccaggctgtggtcccaggaaagcttaatgct
actgctgagaagtcactgctggagccgagccatccccatgatgaagcagaggaagaactt
cctgatggcctggatgagagctgcagtcaagaggagtatgaggacagtgactcggatgct
tcctctgatgctgatgagtcatccagtggctctgtgactcctgtatccaggaattgcatc
gaatgcctggctgagcctgctgaggctcaagacaaagtgctcaaaccagctcttgtctgc
agtttattccctaatgtgcctccaactatctacttcagtactcgggatgagacagtggaa
aagctaccttgggagcagaggaagctgctgcgatggaaaatgtgcagagtcacgcctaac
atagtgaagcaaaccattggcaggtcccacttcagagttagcaaaaaaagcaatgactgg
ctgggttgctggggccaccacatgaaatcccccggcttcaaagccatcaaggaacaccaa
aagctaaaccacttccctggttcatttcaaattggaaggaaggaccgtctgtggcgcaac
ctgttgaagatgcaggctcgctgtgggaaaaaggagtttaatttcttccctcaatccttc
atcctgccccaggacatcaaattactcaggaaagcatgggaggagggagctagccgacag
aaatggattgtgaaaccaccagcatcagcaagaggcattggtattcaggtcatccacaaa
tggagccagctacccaaaaggagaccactgctagtacagagatacctgcacaaaccctac
ctcattggcgggaagaagtttgacctgaggctctatgtttacgtcacttgctatgatccc
cttagggtctacctgttcaaggatggattggttcgctttgccagctgcaagtactcttcc
tcaatggacagcctcagcaacaagttcatgcacttgaccaactacagtgtgaataagaaa
aacacagagtacaagtccaactcggatgagactgcttgtcagggacacaaatgggcactc
aaagctctctggagttacctgacccagaagggagttaacagtgaggccatctgggagaag
attaaggacatcgttattaaaaccatcattgcttctgagccctatgtgaacagcctggtg
aagatgtacgtgcgccgaccgtattgttgccatgagctgtttgggtttgatatcatgctg
gatgaaaacctcaagccctggatcttagaagtcaacatttccccaagcctccactccaac
tccccactggatgtgagcatcaagggccagatgattcgggacctcctcaacctcgctggc
tttgttttgcccagcatggacagtgtggcctcacggacacagataagaagtggctctacc
tgcagtctgggcaatgctttgaaggagaagcccaagccagtatctgagcatttcagagca
gagaagatgaagaaggcctattacttgatgcagaagatacctgaccaggatttttattct
tctgtcttggacatcctgactccagatgatgttcgcatcctggtggagacagaggatgag
tattcgcgacgtgggcagttcgagcgggtgttccccagccacatctctatgcggtacctg
cgcttcttcgagcagcctcgttactttaacatcctggtgacccagtgggagctcaaatac
tacttgaatagacacaaaggtctggagctactgaagaactggtgtgtcaaagggtaccac
actggggcagggacggatttggcccagatgtggtcattgccaaagtcattcttcctccag
acgagtagcattcaatcgaacagcttcagcaaactggaactgggcagactgggcacatgc
ctctcttcagctggtgaggatctcacgagatgcctggagcccagccctactcagagctta
cctctcaacaagtgcactggtggagccgaccagagacctgctggctgcctctctgacacc
accctggtgatgtga
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