Corvus cornix (hooded crow): 104694315
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Entry
104694315 CDS
T03546
Symbol
TSEN54
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104694315 (TSEN54)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104694315 (TSEN54)
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GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
104694315
NCBI-ProteinID:
XP_010405806
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Position
18:complement(5044837..5054173)
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AA seq
607 aa
AA seq
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MGDRGGTGGNRGTGEKEAPWGTSDEGAGEIPGRPAVRGEAPVRGAGVATGVREDRALQSG
VPRLCPRPGAPVLGLSAALPSLSAPLSPRSTAEQPEGRQAPRRPRGRRXFRPDGSARQAE
RLRRCCEEQWRLLSEERPERPGNLVKAEWKPEQGIVELKSPAGKFWHTMGFSERGKQCLL
PEEALYLLECGSVQLFYRDLPLSVQEAYETLLCQEAMSLSHYQVFSHLKQLGYIVLRFNP
STVPSAYERQLNLESHCKSSGKHHCKRRRSSSPRSHEKKCKVSEDLPEAEGTSSKDGDDC
GDSIPMDEKALSVQPKESDAGSAEGESMPVPLDTGQKHSLSFSSRQVGDHKESSTGTHAP
RWDFTTITFPNVAPDQPCTHLPSPDNRLLPENVPGREVDAASWCTRINQKQEKLSRKERK
QWERESRYKSSVNADQEVRRCSNWQEYKALLEQRRQQRVWKRPSHLWDQAVTPLLRPEEV
TSPAALLQQISVLQPSHILDGASRLQEDPEAMKIDFNVYQADAVSKFKKTNPGKPHVRMC
VRSCSRQSKEGGNAVLSSFDEQIPSLRALKQVTYLSGDVPLVFALVDHGEITFYSLKEFK
LPIDVNH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccggggaggcactggggggaaccgtggtaccggggaaaaggaggcaccgtgg
ggaacctccgatgagggggccggggagataccggggcgacccgcggtacgaggggaagca
ccggtacggggagccggtgtggccaccggagtacgggaggaccgggcactgcagtccggg
gtgccccggctctgcccgcggcccggagccccggtactggggctgtcggccgctctcccg
tccctcagcgccccgctgtcgccccgcagcacggcggagcagccggagggtcggcaggcc
ccgcggaggccccgcggcagaaggnnatttcgtcccgacggctcggcccggcaggccgag
aggctgcggcgctgctgcgaggagcagtggcggctgctgtccgaggagcgcccggagcgg
ccggggaatctggtgaaagctgagtggaagccagaacagggcatcgtggagctgaagtcc
cctgcggggaagttctggcacaccatggggttctcggaacgaggcaaacagtgtctgctg
cccgaggaagctctgtacctgctggagtgtggctctgtccagctcttttacagggatctg
cccctgtcagtccaggaagcctacgagaccctgctgtgccaggaggcaatgagcctgtca
cattaccaggtgttcagccacttgaagcaactgggttatattgtactgagattcaacccc
agcactgtcccgtctgcctacgagaggcagctgaacctggaaagtcactgcaagagctct
gggaaacaccattgcaagaggaggaggagttccagcccccggtcgcatgagaagaaatgt
aaagtatctgaggaccttccagaagctgaagggacctccagcaaagatggagatgactgt
ggagactccattcccatggatgaaaaggctttgtcagtgcagccaaaggaatcagatgct
ggcagtgcagagggagagtcaatgccagttccccttgacacaggacaaaagcactctctg
agcttctccagcaggcaggttggagaccacaaggagagcagcactggtacccatgcaccc
cgctgggattttaccaccatcacctttcccaacgtggccccagaccagccatgcacacat
ctgccctcccctgacaacaggcttctgccagagaacgtgccgggcagggaggtggatgca
gcttcctggtgcacacggatcaaccagaagcaggagaagctgtcacggaaggagaggaag
caatgggagagggagagcaggtacaagagcagtgtcaacgccgaccaggaggtgagacgc
tgctccaactggcaggagtacaaagccctcttggagcagaggagacagcagagggtttgg
aaacgaccgtcacacctgtgggaccaagctgtcacaccactgctgcggccagaagaagtg
acctcgccagctgcgctcctccagcagatcagtgtgctgcagccctcccacatcctggat
ggagcctcccggctgcaggaggacccagaggccatgaagatagacttcaacgtgtatcaa
gcagatgccgtgtccaagtttaagaagacaaaccctgggaagccccatgtcaggatgtgt
gttcggagctgtagtagacagagcaaggaaggtggtaatgcagttttatcaagctttgat
gagcagatcccatccctgcgggctttgaagcaggtgacgtatctgagtggggacgtccct
ctggtgtttgctctggtggatcatggagaaatcaccttctattcactgaaggagttcaag
ctgcccattgatgttaatcactga
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