Corvus cornix (hooded crow): 104695045
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Entry
104695045 CDS
T03546
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104695045 (DDX54)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104695045 (DDX54)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
Pre-60S particles
Helicases
104695045 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
104695045
NCBI-ProteinID:
XP_039416933
LinkDB
All DBs
Position
15:13989851..13995317
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AA seq
823 aa
AA seq
DB search
MAPPRARRQPRGAPVPVTPLPAFPTTAEEDDGADAELDTQAMVRAQNQKKKKSGGFQSMG
LSYPVFKGIMKKGYKVPTPIQRKTIPAILRGRDVVAMARTGSGKTACFLIPMFERLKAPS
QAGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIAT
PGRLVHVAVEMKLKLHTMEYVVFDEADRLFEMGFAEQLQEIITRLPDCHQTVLFSATLPK
LLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVVKPQDQTVV
FVATKHHTEYLKELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAARGLD
IPMLDNVINFSFPARAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGHPLVL
AGAQEMPADAGGVLGRVPQSLVDDEECLLLTDHEASLELRSLRRVADNAHKQYLRSRPGP
SPESIKRAKDLDVSQLGMHPLFSARFEDTELERLKFVDSIKTYKSKATIFEINATSRTPA
STVMRSKRRHDHALIEKFQRGQQEKRAAALKGQGLCLAPCKTQDGEGEQEDLQNVFSNMG
GQKRKRGRGGEDGPSKKPQQLAQQDEDFYIPYRPKDFESERGLSVGGEGSAFEQQAAGAV
LDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNNLYEKWK
QKYKVDERDEDEEGPRSREQFRGKHRRGHGPTQPPAQGRVHSELKNKQQILKQRKKVAKQ
RFLQSGGLKRLKARNRQRVQELRQMAFGRRAGAAKKGKLRKRM
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcgcgcccgccgccagccccgcggagcgccggtccctgtgaccccactg
cctgccttccctaccacggccgaggaggacgatggcgccgatgctgagctcgacactcag
gccatggtgcgggcccagaaccagaagaagaagaaatccgggggcttccagtccatgggc
ctcagctaccccgtcttcaagggcatcatgaagaagggctacaaggtgcccacacccatc
cagaggaagaccatccccgccatcctgcgtggccgggatgtggtggcgatggcgcggaca
ggcagcgggaagacggcctgtttcctcatccccatgttcgagcggctgaaggcgcccagc
caggccggggcacgtgccctcatcctctcacccacccgggagctggccctgcagaccctc
aagttcaccaaggagttgggcaagttcactggcttgaagacagccctgatcctgggagga
gacaagatggaggaccagtttgctgccctgcacgagaaccctgacataatcatagccacc
cctgggcgcctggtgcacgtggcagtggagatgaagctgaagctgcacaccatggagtac
gtggtgttcgacgaggctgacaggctcttcgagatgggctttgctgagcagctccaggag
atcatcacccggctcccagactgccaccagaccgtgctgttctccgccacactgcccaag
ctgctcgtcgagtttgcccgggctggcctcactgagccaatgctgatccgcctggatgtg
gagtccaagctgagcgagcagctcaagctggcgttcttccatgtgcgtggggacgacaaa
ccagccgtgctgctccacctgctccgcagtgtggtgaagccccaggaccagactgtggtc
tttgtggccaccaagcaccacacggagtatctgaaggagctgctgacggcgcagggcatc
cgctgcacccacatttacagttctctggaccagactgcccgcaagatcaacatcgccaag
ttctcccagggcaagtgcccagtgctgctggtcaccgacgtggccgcccgggggctggat
atccccatgctggacaatgtcatcaacttcagcttccccgccagggccaagctgttcctg
catcgtgttggccgtgtggcccgagctggccggagtggcactgcctactcgctggtggct
cccgacgagatgccctacgtgttcgacctccacctattcctggggcacccgcttgtcctc
gctggagcccaggagatgcctgctgacgctggcggggtcctgggccgtgtcccccagagc
ctggtggatgacgaggagtgcctgctgctgacggaccacgaggcctctctggagctgcgc
agcctccgccgcgttgctgacaacgcccacaagcagtacctgcgctcccggcccggcccc
tcgccagagtccatcaagagggccaaggacctggatgtgtcccagctgggcatgcaccca
ctcttcagtgctcgcttcgaggacaccgagctggagaggctgaagtttgtggatagcatt
aaaacctacaagtccaaggcgaccatctttgagatcaacgccacgtcccggacaccggcc
agcactgtgatgcgatcgaagcggcgccacgaccatgccctgattgagaagttccagcgc
gggcagcaggagaagcgggcagcagcacttaaagggcaggggctgtgcctggccccctgc
aagacccaggatggggaaggagagcaggaagatctccagaacgtgttctccaacatgggg
ggccagaagcgaaaacggggccgagggggagaagacggtcccagcaaaaagccgcagcag
ctggcacagcaggatgaggacttctacatcccataccggcccaaggactttgagagtgag
cgggggctgagcgtgggcggcgagggcagcgcctttgagcagcaggcggccggggctgtg
ctggatctcatgggtgatgagaaccacaacctcaacaagagcaaacagctgctcaagtgg
gaccgcaagaagaagcggtttgtggggcagacgggccaggaggacaagaagaaggtgcgg
acagagagcgggcgctacatcagcagctcctacaagaacaacctctatgagaagtggaag
cagaagtacaaggttgacgagcgggatgaggatgaggaagggccacgcagcagggagcag
ttcagagggaagcacaggcgtgggcacgggcccacgcagcccccggcgcagggcagggtg
cactcggagctgaagaacaagcagcagatcctgaagcagcgcaagaaggtggccaagcag
cgcttcctgcagagcgggggcctgaagcgcctcaaggccaggaaccggcagcgcgtgcag
gagctgcggcaaatggccttcgggcgccgggcgggcgctgccaagaagggcaagctgagg
aagaggatgtag
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