Corallococcus coralloides: COCOR_03852
Help
Entry
COCOR_03852 CDS
T01780
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00470
D-Amino acid metabolism
ccx00550
Peptidoglycan biosynthesis
ccx01100
Metabolic pathways
ccx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
COCOR_03852 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COCOR_03852 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
COCOR_03852 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
COCOR_03852 (ddlA)
Enzymes [BR:
ccx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
COCOR_03852 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
Precursor biosynthesis
Amino acid ligase
COCOR_03852 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
GARS_A
CPSase_L_D2
ATP-grasp
RimK
TTL
ATPgrasp_YheCD
ATPgrasp_Ter
Dala_Dala_lig_N
Motif
Other DBs
NCBI-ProteinID:
AFE08537
UniProt:
H8MSG9
LinkDB
All DBs
Position
4794965..4797148
Genome browser
AA seq
727 aa
AA seq
DB search
MRIALTYNLRLSDSEEEAEFDTQETVNTLAGAIERLGHRLERFEVSGPASRTVARLEAYS
PDLIFNTAEGRRGRFREAFYPALFDELGFAYTGSDAYALALTLDKQLTKLILSKHGIRTP
GWQYVEKLSELQPENLRFPVIVKPNFEGSSKGITQDSVAETLEQVREKVAKALEKYPAGV
LVEEYISGRDLTVPFLAAVDNDYDGVLAPVEYVIDPEASQGRKYAIYDYELKTRREKSVS
VRAPANIPAKMSEDVRTMAQKILQVLDCRDLGRLDFRVSDAGVPYFLEINALPSLEPGAG
IYAAAELEGLHLDGVINSIIQSAGKRHKIRDNKSRQGRPARKSGPLRVGFSFNVKRVKPS
ATAETVQEDSEAEYDSPNTLQAIREAIASWGHEVIDLEATAELPTVLSSTPLDIVFNIAE
GFKGRNRESQVPAMLELLDIPYTGSDPATLSLALDKALAKKIVRQAGILTPNFQLMVTGK
ERLNKEFTTFPLIVKPVAEGSSKGVVTKSVCYSEAELRDVVKEIAGKYQQPALIEEYIGG
REFTVGLLGERRPRVLPPMEIVFLDKAEKNPVYSFQHKLDWTDRIRYDAPAKIEPALLEK
LRTAARNSFMALGCRDVARIDFRMDDKGRIYFIECNPLPGLTPGWSDLVLIAAGAGMDYR
TLIGEIMAPAIRRYKEREARRAQTENPAGTQAPPLNKVVQRIEEQNARANASAPAENTPA
PRPELKS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgctgacctacaacctgcggctttcggactcggaagaagaggcggagttc
gacacgcaggagacggtgaacacgctggcgggagccatcgagcggctgggccaccgcctg
gagcgcttcgaggtgagcggccccgcgtcgcgcaccgtcgcccgcctggaggcgtacagc
ccggacctcatcttcaacacggcggaggggcgccgcggccgcttccgcgaggccttctac
ccggcgctcttcgacgagctgggcttcgcgtacacgggctcggacgcgtacgcgctggcg
ctcacgctggacaagcagctcaccaagctcatcctctccaagcacggcatccgcacgccg
ggctggcagtacgtggagaagctcagcgagctgcagccggagaacctgcgcttccccgtc
atcgtgaagcccaacttcgagggctcctccaagggcatcacccaggactccgtcgcggag
acgctggagcaggtgcgcgagaaggtggcgaaggcgctggagaagtacccggcgggcgtg
ctggtcgaggagtacatcagcgggcgcgacctcacggtgccgttcctggccgcggtggac
aacgactacgacggcgtgctcgcgccggtggagtacgtcatcgacccggaggcgtcccag
ggccgcaagtacgccatctacgactacgagctgaagacgcgccgggagaagtccgtgtcc
gtgcgcgcccccgcgaacatcccggcgaagatgtccgaggacgtccgcaccatggcgcag
aagatcctccaggtgctggactgccgcgacctgggccggctggacttccgcgtgtccgac
gcgggcgttccgtacttcctggagatcaacgcgctgcccagcctggagccgggcgcgggt
atctacgccgcggcggagctggaagggctgcacctggacggggtcatcaactccatcatc
cagagcgcgggcaagcgtcacaagatccgcgacaacaagagccgccagggcaggcccgcg
cgcaagtccggtccgctgcgcgtgggcttcagcttcaacgtgaagcgcgtgaagcccagc
gccacggcggagacggtgcaggaggacagcgaggccgagtacgactcgcccaacaccctg
caggccatccgcgaggccatcgcctcctggggccacgaggtcatcgacctggaggccacg
gcggagctgcccacggtgctctccagcacgccgttggacatcgtcttcaacatcgcggag
ggcttcaagggccgcaaccgcgagagccaggtgccggcgatgctggagctcctggacatc
ccgtacacgggcagcgaccccgcgacgctgtcgctcgcgctggacaaggcgctggcgaag
aagatcgtccgtcaggcgggcatcctcacgcccaacttccagctgatggtcacgggcaag
gagcgcctcaacaaggagttcaccaccttcccgctcatcgtgaagccggtggcggagggc
agctccaagggcgtcgtcaccaagagcgtctgctactccgaggcggagctgcgcgacgtg
gtgaaggagatcgccggcaagtaccagcagcccgcgctgattgaagagtacatcggcggc
cgtgagttcacggtgggcctcctgggcgagcggcgtccgcgcgtgctgccgcccatggag
atcgtcttcctggacaaggcggagaagaacccggtctacagcttccagcacaagctcgat
tggacggaccgcatccgctacgacgcgcccgcgaagatcgaacccgcgctgctggagaag
ctgcgcacggcggcgcgcaactcgttcatggcgctggggtgccgcgacgtggcgcgcatc
gacttccgcatggacgacaaggggcgcatctacttcatcgagtgcaacccgctgcccggc
ctcactcccggctggagcgacctggtgctgatcgcggcgggtgccggcatggactaccgg
acgctcattggcgagatcatggcgcccgccatccgccgctacaaggagcgcgaggcacgc
cgggcccagacggagaacccggccggtacgcaagcgccgccgctcaataaagtcgtgcag
cggattgaggagcagaacgcgcgggccaatgcgtcggcccccgcggagaacacgcccgcg
ccgcgtccggagctcaagtcctga
DBGET
integrated database retrieval system
