Corallococcus coralloides: COCOR_04943
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Entry
COCOR_04943 CDS
T01780
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03030
DNA replication
ccx03410
Base excision repair
ccx03420
Nucleotide excision repair
ccx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCOR_04943 (polA)
03410 Base excision repair
COCOR_04943 (polA)
03420 Nucleotide excision repair
COCOR_04943 (polA)
03440 Homologous recombination
COCOR_04943 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccx03032
]
COCOR_04943 (polA)
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_04943 (polA)
Enzymes [BR:
ccx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCOR_04943 (polA)
DNA replication proteins [BR:
ccx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
COCOR_04943 (polA)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
COCOR_04943 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COCOR_04943 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AFE09940
UniProt:
H8MNL4
LinkDB
All DBs
Position
complement(6225090..6227795)
Genome browser
AA seq
901 aa
AA seq
DB search
MADTSPPRSERRLALFDASGFIFRAYHAIPPLTTSKGVPTNAVLGFTRMVLKALQELKPT
HVALAFDKSGRVERQKIDPTYKANRKAPPEDLTPQFPLIRKVGDVLNLPSLDAEGWEADD
VIGTLAMQAKAEGFQVLVVTSDKDFMQIVDEDITLFDPAKNKRMGIADVQEKMGILPGQV
RDFLALVGDAVDNVAKVPGVGDKTAVELLHQFGDVETLLARVEEVKKPKIRAALESHRES
LTRAKQLVTFNTGLPLGVKLDDLIRRAPDATRARDLFTELEFFALLRDLPAEEAPARPDV
APLVTTTSLVTTEAELKALADAAKASGALTLVPAFEGMPFAAPLVGLGVALPDGSTRYVP
LRHQQLGATQVPVAAFTAVMKDVIADAAVKKGGHDLKALTLVLANEGLTLEGAHDDVELL
SYLLNPSRREHALEDLARERLRSELPALPASVGGKKGRPLADHGPEEVAAAYAVRADAAR
RMAPELWKELELGGLAELARTLELPLLPVLARMEREGVKLDVAELGRTSERVDVEVKAKE
AECHQAAGHVFNLGSNPQLAQVLYEEQKLPILKRGKTGPSTDQEVLEKLAEEHNSVLARA
LIEYRGLSKLKSTYLDTLPTLVAKDGRIHTTYHQAATATGRLSSSDPNLQNIPVRTELGR
EIRRAFVADAGHQLVSADYSQIELRLLAHIAEDPVLIDAFRNDEDIHSRTAAEVFGVDPK
DVDREQRRVAKMVNFGIAYGLSAHGLSTRLGISQENARDVIERYFIRYAGIRQYLEDTVE
KARKVGYVETLYGRRRLMGDLLSKNRAVAQAAERAAINMPIQGTAADLMKKAMLAVDAAL
REQKLKTRVLLQVHDELLFEAPDAEVEAVKALAVKSMASVAELKVPLKVDVGAGKSWADA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccagccccccgcgctccgagcgccgcctggcgctcttcgacgcctctggc
ttcatcttccgcgcctaccacgccatccccccgctcacgacgagcaagggggtgccgacc
aacgcggtgctgggcttcacccgcatggtgctcaaggccctgcaggagctgaagcccacg
cacgtggcgctggcgttcgacaagtccggccgcgtggagcgtcagaagatcgaccccacg
tacaaggcgaaccgcaaggccccgccggaggacctgacgccccagttcccgctcatccgc
aaggtgggggacgtgctgaacctgccctcgctggacgcggagggctgggaggcggatgac
gtcatcggcacgctggcgatgcaggccaaggcggagggcttccaggtcctggtcgtcacc
agcgacaaggacttcatgcagatcgtcgacgaggacatcaccctcttcgaccccgcgaag
aacaagcgcatgggcatcgcggacgtgcaggagaagatgggcatcctgcccgggcaggtg
cgcgacttcctggccctggtgggcgacgcggtggacaacgtcgccaaggtgcccggcgtg
ggcgacaagacggcggtggagctgctccaccagttcggcgacgtggagacgctgctcgcg
cgcgtggaggaagtgaagaagccgaagatccgcgcggcgctggagtcccaccgcgagagc
ctgacgcgcgccaagcagctcgtcaccttcaacaccgggctgcccctgggcgtgaagctg
gacgacctgatccgccgcgctccggacgccacgcgcgcgagggatttgttcacggagctg
gagttcttcgcgctcctgcgcgacctgcccgcggaggaggccccggcccggccggacgtg
gcgccgctcgtgaccaccacctcgctcgtcaccaccgaggcggagctgaaggcgctggcg
gacgcggcgaaggcctcgggggccctcaccctggtgcccgccttcgagggcatgcccttc
gcggcgccgctggtgggcctgggcgtggcgctgccggacggctccacgcgctacgtgccg
ctgaggcaccagcagctgggcgccacgcaggtgccggtggcggccttcaccgcggtgatg
aaggacgtcatcgcggacgcggcggtgaagaagggcggacacgacctcaaggcgctcacg
ctggtgctggccaacgaagggttgacgctggagggcgcgcacgacgacgtggagctgctc
agctacctgctcaacccgtcgcgccgggagcacgcgctggaggacctggcgcgggagcgg
ctgcgctcggagctgcccgcgctgcccgcgtccgtgggcggcaagaaggggcggccgctg
gcggaccacgggccggaagaggtggccgcggcgtacgcggtgcgcgcggacgcggcgcgc
aggatggcgccggagctgtggaaggagctggagctgggcgggctcgcggagctggcccgc
acgctggagctgccgctgttgcccgtgctcgcgcgcatggagcgagagggcgtgaagctg
gacgtggcggagctgggccgcacctccgaacgcgtggacgtggaggtgaaggcgaaggag
gccgagtgccaccaggccgcgggccacgtcttcaacctgggctccaacccgcagctggcg
caggtgctctacgaggagcagaagctgcccatcctcaagcgcggcaagacgggcccgtcc
acggaccaggaggtgctggagaagctggcggaggagcacaacagcgtgctcgcgcgcgcg
ctcatcgagtaccggggcctgtccaagctcaagagcacctacctggacacgctgcccacg
ctggtggcgaaggacgggcgcatccacaccacgtaccaccaggcggccaccgccacgggc
cggctgtcctcgtccgacccgaacctgcagaacatccccgtccgcacggagctggggcgc
gaaatccgccgcgccttcgtggcggacgcggggcaccagctggtgagcgcggactactcg
cagattgaattgcggctcctggcgcacatcgcggaggacccggtcctcatcgacgccttc
cgcaacgacgaggacatccacagccgcacggcggcggaagtcttcggcgtggacccgaag
gacgtggaccgcgagcagcgccgcgtggcgaagatggtgaacttcggcatcgcgtacggc
ctgtccgcgcacggcctgtccacgcgcctgggcatctcccaggagaacgcgcgcgacgtc
atcgagcggtacttcatccggtacgcgggcatccgccagtacctggaggacaccgtggag
aaggcgcgcaaggtgggctacgtggagacgctctacggccgccgccgcctgatgggggac
ctgctctccaagaaccgggcggtggcccaggccgcggagcgcgccgccatcaacatgccc
atccagggcaccgccgcggacctgatgaagaaggccatgctggccgtggacgccgcgctc
cgcgagcagaagctgaagacgcgcgtgctcctccaggtgcacgacgaactgctcttcgag
gcgccggacgcggaagtggaagccgtgaaggccctggccgtgaagagcatggcctccgtc
gccgagctgaaggtgccgctcaaggtggacgtgggcgcggggaagagctgggcggacgcg
cactga
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