Campylobacter coli RM4661: YSS_04425
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Entry
YSS_04425 CDS
T03166
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccy03016
]
YSS_04425
Transfer RNA biogenesis [BR:
ccy03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
YSS_04425
Prokaryotic type
Methyltransferases
YSS_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
GTP_EFTU
Roc
Ras
RsgA_GTPase
AAA_18
AAA_21
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AHK76788
LinkDB
All DBs
Position
836144..837472
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AA seq
442 aa
AA seq
DB search
MNDTIVAIATAHGVGSISIIRLSGERALEIALKLSKKNELCPRYATFTKLFNQKNEFLDE
AIVIYFKAPFSFTGEDIVEFQVHGGFSVSEILLEELISLGARLAEPGEFSKRACLRGKMS
PLKALNIQDLILAKSANAAKIIARNMQGSLGELLDKIRTDLVKTLAFVETSIDYADDDLP
SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA
IVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDEIEQIGIELSKKSIEDADIILAI
FDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDLKTQFDKPCDIDFIELSVQNDIQILKE
KLEKYLNSLDSDGFLVSSIALINACKISSEAILRAKELLSENSLELFAFELNLAIGELAK
FTKDFDRNEILDEMFGNFCLGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatactatagtagctattgcaactgcccatggagtgggttctatctcgattata
agattaagcggggaaagagcgcttgaaattgctttaaaattaagcaaaaaaaatgaactt
tgcccccgctatgcaacatttacgaagctttttaatcaaaaaaatgaattccttgatgaa
gccatagtgatctattttaaagccccttttagttttacaggtgaagatatagttgaattt
caagtgcatggtggttttagtgtaagtgaaattttgcttgaagagttgataagcttagga
gcaagactagcagaacctggagaattcagtaaaagagcttgtttaaggggtaaaatgagt
cccttaaaggctttaaatatacaggatttaatcttagcaaaatctgcaaatgcagcaaag
attatcgcaagaaatatgcaaggaagcttgggagaacttcttgataaaattcgcacagat
ttggtaaaaactttagcttttgtggaaacgagtattgattatgctgatgatgatttgcct
tctgatttactagaacaaattagcacaatgtgtgaagaaaattctaaaattctaaaagaa
atttatacactttcagaaagtaaaaaaggattgatagagggttttaaaatcgctattgtg
ggtaagcctaatgttggaaaatcttctcttttaaatgccttgctttcttataaaagagct
attgtttctgatatagctggaacgactcgtgataccatagaagagagttttaaactaggt
acgcatctattgcgtattattgatactgcaggaattcgagaaagtaaagatgagattgag
caaatcggtatagagcttagtaaaaagagcattgaagatgcagatattatcttagctatt
tttgataattcaagaaaaaaagatgaagaggatgaaaatatttttaagcttttaagtcaa
agcgataaaaagattttttatcttttaaataaaagtgatttaaaaactcaatttgataaa
ccttgtgatattgattttatagaacttagtgttcaaaacgatattcaaattttaaaagaa
aagcttgaaaaatatttaaattcgctagatagtgatggatttttagttagttctatcgct
cttattaatgcttgtaaaatttcaagcgaagcgattttaagggctaaagaattactcagt
gaaaattctttagagttgtttgcctttgagttaaatttagccattggcgaacttgcaaaa
tttactaaagatttcgatagaaatgaaattttagatgaaatgtttggtaatttttgttta
ggaaaatga
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