Corynebacterium cyclohexanicum: SCMU_07260
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Entry
SCMU_07260 CDS
T07918
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccyc
Corynebacterium cyclohexanicum
Pathway
ccyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCMU_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccyc03019
]
SCMU_07260
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_07260
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCMU_07260
Messenger RNA biogenesis [BR:
ccyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCMU_07260
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCMU_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BCT74884
LinkDB
All DBs
Position
743522..745693
Genome browser
AA seq
723 aa
AA seq
DB search
MTHDGARGLPHDAHGGLRGEALTVLRSLVGREDAAFHPGQFEAIEALVADHRRALVVQRT
GWGKSAVYFVASLLLRARGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANRLEWDE
VHAALEADAADVVLISPERLTNPGFREQHLPELLARTGLLVVDEAHCISDWGHDFRPDYR
RIASLIGELPASVPVLATTATANARVVRDIEEQLGAGVLTLRGALGRESLRLGVLRLPDA
GHRLAWLLAHLEELPGSGIIYTLTVSAAEDTARILSEAGHRVLAYTGKTDTEDRERAEQL
LKDNEVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRGAANADVLLLPG
PEDRDIWRYFATASMPDEAKAHAVIAALQESGRALSTVALESLVELRRTQLELLLKVLAV
DGAVERVGGGWQATGLPWEYDAERYARIAEARVAEQDSMVVYEETAGCRMEYITSVLDDE
TAAPCGRCDNCAGRWFPDSVDPGLLDRAGTQLRHPGIPIEARAQWPSGMDKLGVSVRGRI
PADEQLAEGRALGRLTDLGYGGPLRELFAAGAPDTEVPPALARACVELLSSWARGDAAAG
AWSGAGRPAAVVSVPSATRPQLVDSLARGIAQVGRLPYLGALERTEAARPGQGGGNSAFR
LAGVWAAFDVGPDLRAALADAEGQPILLVDDLVDSRWTITVAGRLLRRHGAGSVLPIALA
QAG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcacgacggcgcgcggggccttccgcatgacgcgcacggagggctccggggcgag
gccctgacggttctgcgcagcctcgtgggccgggaggacgcagcgttccacccgggccag
ttcgaggccatcgaggcgctcgtggccgatcaccggcgcgcgctcgtggtccagcgcacg
ggctggggaaagtccgctgtgtacttcgtcgcgtccctgctgctgcgggcccggggggcc
gggccgacgctgatcgtctcgcctctcctggcgctcatgcgggaccaggtggctgcggcc
gcccgggcgggcgtgcgcgccgtcgcgatcaactccgcgaaccggctcgagtgggatgag
gtgcacgccgcgctcgaggcggacgccgcggacgtggtgctgatctcgccggagcggctc
acgaaccccgggttccgcgagcagcacctgcccgagctgctggcccggaccgggctgctc
gtcgtggacgaggcacactgcatctccgactggggccacgacttccggccggactaccgg
cgcatcgcctcgctcatcggggagctcccggcctccgtcccggtcctcgcgaccaccgcg
acggccaacgcccgggtggtacgcgacatcgaggagcagctcggcgcgggtgtcctgacc
ctgcggggcgccctggggcgggagtcgctgcgcctcggcgtcctgcgcctgccggatgcg
ggccaccgtctcgcgtggcttctcgcccatctcgaggaactgccgggaagcggcatcatc
tacacgctgacggtctccgcggcggaggacaccgcccggatcctctccgaggcgggccac
cgagttctcgcgtacaccggcaagacggacaccgaggacagggagcgggccgagcagctg
ctcaaggacaacgaggtgaaggccctcgtggccacgagcgcgctcgggatgggcttcgac
aagccggacctgggcttcgtcgtgcacctcggcgccccgtcgagccccgtcgcgtactac
cagcaggtcggccgcgcgggccgcggcgccgcgaacgccgacgtgctgctgctgcccggg
cccgaggaccgcgatatctggcggtacttcgccaccgcctcgatgccggacgaggccaag
gcgcacgccgtcatcgcggcgcttcaggagtcggggcgggccctgtccacggtggcactc
gagtccctcgtcgagctgcggcgcacccagctcgagctgctcctcaaggtcctcgcggtg
gacggcgcggtggagcgcgtgggcggcgggtggcaggccaccggcctgccctgggagtac
gacgccgagcggtacgcccgcatcgccgaggcccgcgttgccgagcaggactcgatggtc
gtgtacgaggagacggccggatgccgcatggaatacatcacgagcgtgctggacgacgag
accgccgccccgtgcgggcggtgcgacaactgcgcgggccgctggtttcctgacagcgtc
gaccccgggctcctcgaccgcgccgggacgcagctgcgccaccccggcatcccgatcgag
gcccgtgcccagtggccctcgggcatggacaagctcggcgtctcggtcaggggcaggatc
cccgcggatgagcagctcgccgaggggagggcgctcggccgcctcacggacctcggctac
ggcgggcccctgcgcgagctcttcgccgccggcgcgccggacacggaggtcccgcccgcg
ctggcgagggcctgcgtggagctgctgtcctcgtgggcccgtggcgatgcggcggcgggc
gcgtggagcggtgcagggcggccggccgccgtcgtgagcgtcccgtcggcgacacgccca
cagcttgtcgattcgctcgcgcggggcatcgcccaggtgggccggctgccgtacctcggc
gcgctcgagcggaccgaggccgcgcgccccgggcagggcgggggcaacagcgccttccgg
ctcgccggggtctgggccgcgttcgacgtcggccccgacctccgcgccgcgctcgccgat
gcggagggacagcccatcctgttggtggacgacctcgtggacagccggtggacgatcacc
gttgccgggcggctgctgcgcaggcacggcgccgggtccgtcctgccgatcgcgctggca
caggccggatag
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