Chthonomonas calidirosea: CCALI_00817
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Entry
CCALI_00817 CDS
T02699
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ccz
Chthonomonas calidirosea
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccz03019
]
CCALI_00817
03009 Ribosome biogenesis [BR:
ccz03009
]
CCALI_00817
03036 Chromosome and associated proteins [BR:
ccz03036
]
CCALI_00817
Enzymes [BR:
ccz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CCALI_00817
Messenger RNA biogenesis [BR:
ccz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCALI_00817
Ribosome biogenesis [BR:
ccz03009
]
Eukaryotic type
90S particles
RNase
CCALI_00817
Prokaryotic type
rRNA processing factors
CCALI_00817
Chromosome and associated proteins [BR:
ccz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CCALI_00817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF6532
DND1_DSRM
DUF1525
Motif
Other DBs
NCBI-ProteinID:
CCW34641
UniProt:
S0ET74
LinkDB
All DBs
Position
961982..962731
Genome browser
AA seq
249 aa
AA seq
DB search
MLDREELTENSTVLPLDKLQQLEQRLGVDFRRKELLAQAITHRSAVSSHQLQSNERLEFL
GDAIIGLIVAEWLFKHHPDVTEGTLAKAKAYAVSEQALVEAARRLGIEEFVVVAYPESLL
EGRGGRAILADAFEAIVAALYLDRGLVATKKFVERAMADIIQEAIKESYRRDYKSTLQEL
VQAQYRLTPVYRIRTEYGSDHDKTFEAEVLLHERPLGYGVGKSKKEAEQEAARAALAHWS
QMEREDENK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgctggatagagaagagctcacggaaaatagcaccgtcttacccttagataagctacaa
cagcttgaacagagactgggggtagattttcgtcgaaaagagctgctcgcacaggccatc
acgcatcgctctgccgtctcctcgcatcagcttcaaagcaacgaacggttggagtttctt
ggggatgccatcatcggccttatcgtggcagaatggctcttcaagcaccatcccgacgtg
acagagggcaccctcgctaaggcaaaagcctacgccgttagcgagcaggccctcgtcgaa
gccgcacgccgactcggcatcgaggagtttgtcgttgtcgcctaccccgaatccctccta
gaggggcgcggtggacgcgcgatcttggccgacgctttcgaggccatcgtggccgctctc
tatctcgaccggggcctagttgccaccaaaaagttcgtggagagggccatggccgacatc
attcaagaggctattaaagagagctaccgccgcgattacaagtccacactccaagagctc
gtccaagcccaatatcgtcttaccccggtctatcgcatccgaacggagtacggcagcgac
cacgataaaacgtttgaggccgaggtgctgctgcacgagcgcccgctggggtacggggta
ggcaaaagcaaaaaggaggccgaacaagaagcggcccgtgcggcgctagctcattggagc
caaatggaaagggaagacgaaaacaagtaa
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