Clostridioides difficile CD196: CD196_0838
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Entry
CD196_0838 CDS
T00997
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00330
Arginine and proline metabolism
cdc01100
Metabolic pathways
cdc01110
Biosynthesis of secondary metabolites
Module
cdc_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CD196_0838 (speA)
Enzymes [BR:
cdc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
CD196_0838 (speA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
OKR_DC_1_C
Cys_Met_Meta_PP
Beta_elim_lyase
SepSecS
Motif
Other DBs
NCBI-ProteinID:
CBA61600
UniProt:
A0A0H3N079
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All DBs
Position
999789..1001264
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AA seq
491 aa
AA seq
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MDSEFANAVELSYECAPLLESLKEYSEKDIACFDVPGHVKNRGVAILNKYLGESLMKMDI
NSSPTMDNVSAPNGIIKNAQDLLAQAYMADEAFFITNGTTQAIHAMILSVIKPGEKVLLP
RNIHKSVINALILCGGIPIFIQPEFDEKLGISLNITLEKVRTEIEKDCNIKALFFLNPTY
YGVCADLESIIELCHKNNVLVLVDEAHGAHFPFHLDLPPSAISLGADMVAVSIHKTGGAL
TQSSALLLNRDNVSFEKVLQSINMLQSTSASYLLMASIDGARVNLVENGEKQLSKALNLS
RYAKSKLNKIDGIKVLSTEILKQKGVKFIDETKLCINVKELNLTGFEVYDLLYKNFSIQV
ELGDSYNILALVSIGTNKSDIDRLVKALSIIAKIYRKESTLNEFNMVQINPIIKLNPREA
FYAPKESVEINSCIDRICGESIMAYPPGIPIIAPGELITEEIMEYIIFLKNSNAYLTDVQ
DKNLDRILVIK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgagtttgcaaatgcagttgaattaagctatgagtgtgctccattattagag
tcgttaaaggaatactcagagaaagatatagcttgttttgatgttcctggacatgtaaaa
aatagaggtgtagctatattaaataaatatctaggtgaaagtctcatgaaaatggatata
aattcatcaccaactatggataatgtatctgcgccaaatgggattataaaaaatgcacaa
gatttgctagcacaagcatatatggctgatgaggcattctttataacgaatggcacaact
caagcaatacatgcaatgattttgagtgttataaaaccaggtgaaaaagtattacttcca
agaaatatacataaatcagtaataaatgcgttaatactttgtggaggaataccaatattt
atacaaccagaatttgatgaaaaactaggtataagtttaaatattactcttgaaaaagtt
agaacagagatagaaaaagattgtaatataaaagcattatttttccttaatccaacttac
tatggagtttgtgcagaccttgagagtattatagaactatgccataaaaataatgtttta
gtgttagttgatgaagctcatggtgcacattttccatttcatttagatttacctccttct
gcaataagtttaggagctgacatggtagctgtaagtatacataaaactggaggagcattg
acacaatcttcagcactcttattgaatagagataatgtaagttttgaaaaggttcttcaa
tcaatcaatatgctacaatcaacatcagcatcttatttgcttatggcaagtatagatggt
gctagagttaatctagttgagaatggtgaaaagcaactgtcaaaagcattaaatctatct
aggtatgcaaaatctaaattgaacaaaattgatggaataaaagttttatctacagaaata
ttgaaacaaaaaggtgttaaatttatagatgaaacaaaattgtgtataaatgtaaaagaa
ttaaatttgactggatttgaagtatacgatttattatataaaaatttttcaattcaagta
gaattgggagattcatataatatactggcacttgtgtccattggaacaaataaatcagat
atagatagattagtaaaagcactttctataattgcaaagatttatagaaaagaatcaaca
ttaaatgaatttaatatggttcaaataaatccaattattaaacttaatccaagagaagct
ttttatgcaccaaaggaaagtgtagaaatcaattcatgtatagatagaatttgtggagaa
tcaataatggcatatccaccaggtataccgattattgctccaggagaattgataacagaa
gaaattatggagtatattattttcttaaaaaatagcaatgcgtatcttacagatgtacaa
gataaaaacttagatagaatactagtaataaaataa
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