Clostridioides difficile R20291: CDR20291_0923
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Entry
CDR20291_0923 CDS
T00998
Symbol
ccpA
Name
(GenBank) LacI-family transcriptional regulator (catabolite control protein)
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdl03000
]
CDR20291_0923 (ccpA)
Transcription factors [BR:
cdl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CDR20291_0923 (ccpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_7
HTH_24
HTH_Tnp_ISL3
MarR
HTH_31
Trp_repressor
HTH_23
HTH_26
MerR
MarR_2
HTH_AraC
HTH_Crp_2
TrmB
HTH_28
Sigma54_DBD
TnsD
HTH_6
HTH_10
HTH_IclR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CBE03075
UniProt:
A0A9R0BJ03
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Position
1135884..1136906
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AA seq
340 aa
AA seq
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MKMKGNITIKDVAKQAGVSISTVSRVINDSKPVTDEVKQKVLEVIKETGYIPNPLARSLV
TKKSQLIGVIVPEVSDSFVNEVLNGIEEVAKMYDYDILLANTYSDKEQELKSINLLRAKQ
VEGIVMISWIVEQEHINYIQNCGIPATYISKTARNYDIYTVSTSNEEATFDMTEHLIKKG
HEKIAFIMTSKDDTVLEMERLAGYEKALSNNNIELDKSLIKYGGTDYESGYNSMKELLDD
GIIPHAAFVTGDEAAIGAINAICDAGYKVPEDISVAGFNDVKIARMYRPKLTTVYQPLYD
MGAVAIRMVIKLINKELIENKKIELPYRIVDRESVTERKK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaggcaatataacgataaaagatgttgctaaacaagcaggagtgtcaata
tctactgtatctagagttataaatgattcaaaacctgtaactgatgaagtcaaacaaaaa
gttttagaggttataaaagagactggatatataccaaatccacttgctagaagcttagta
acaaagaagagtcaattaataggggtaatagttccagaagtttcagattcttttgttaat
gaggtgttaaatgggatagaagaagttgctaaaatgtatgactatgatattcttttagcg
aatacatactctgataaggaacaagaacttaagagtataaatctattgagagcaaaacaa
gtggaaggtatagttatgatttcatggatagttgaacaagaacatatcaactatatacaa
aattgtggaataccagcgacatatataagtaaaactgctagaaattatgatatatataca
gtaagtactagcaacgaagaagctacttttgatatgacagagcatcttataaagaaaggt
catgaaaagatagcttttataatgacgagtaaagatgatactgttttagaaatggaaaga
cttgctggttatgagaaagcactttcaaataacaatatagaattagacaagagtttgatt
aagtatggtggaactgattatgagagtggatacaatagtatgaaagaactattagatgat
ggaataatacctcatgcggcttttgtaacaggtgatgaggctgccataggtgctataaat
gctatatgtgatgctggatataaggttccagaagacatatctgttgcaggatttaatgat
gttaagatagctagaatgtatagacctaaacttactacagtatatcaacctctatacgat
atgggagcagtagcaataagaatggttataaaattaataaataaggaattaattgaaaat
aagaaaatagaattaccttatagaattgttgatagagaaagtgttacagaaagaaaaaaa
taa
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