Chelatococcus daeguensis: BOQ54_10250 Help Entry BOQ54_10250       CDS       T04583                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism cdq  Chelatococcus daeguensis Pathway cdq03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cdq00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     BOQ54_10250  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cdq03400]     BOQ54_10250 Enzymes [BR:cdq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      BOQ54_10250 DNA repair and recombination proteins [BR:cdq03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      BOQ54_10250 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  APF37660 LinkDB All DBs Position complement(2182358..2184898) Genome browser AA seq 846 aa AA seqDB search MAEVRHLLREYRERRDFTRTAEPDVTAEARIGEGLLFVVQKHAATRLHYDFRLEWQGVLK SWAVTRGPSLDPADKRLAVRTEDHPLAYGDFEGIIPKGQYGGGTVMLWDRGTWEPVGDPD EGLRRGKLTFRLHGERLSGEWALVRMAPKPGDKRENWLLIKHQEETSGRRRPPDILARHT RSVASGRTMEEIAAGGRTIAPEDVAPERRARRPAAKAAEKKAGKGGRGGHALPRWVEPQL ATLVDAAPEGGQWLSEMKYDGYRALVAIGGGTCRVYTRNGKDWTDRFPEVAQAAGRLDTS GTLIDGEIVAFDEKGKTDFSTLQAALQEGGRGLTFFAFDLLWLDGEDVRGRPLTERKDLL QQLLGEAGPPLIYSTHVVGNAPEVNRRLCAAGHEGIVAKRAEDAYRSGRGRSWLKVKCGA RQEFVIGGYRPSDKKGRTVASLLIGVNEGGKLVYKGRVGAFEGDHLARLEQLLASRGRKT SPFAELPRDIARRARFVRPDIVVEVGFTEFTREGAVRHGVLKGIREDKPAREVVLETPRG TAMQEHEARDVIAGIRLSNPDKVLFAEQGVTKADLAAHYERVAGRILPFVSERLLSLVRC PEGAGTQCFFQKHGNKTVARELKRREITESDGERGVYLYVDDLAGLVAGVQMGTLEYHIW GSRIDRLDQPDRLVFDLDPDEGLDFAAVRAAAFDLRERLATLGLQTVPLLTGGKGIHVIA PLVRRADWPMVKAFARGFARLIAGENPDRYVAQAAKAKRAGRIFVDWLRNERGSTAIAPY STRAKKNAPVATPVGWDELRTIDTAQAFTIADMEKRLSMPDPWAGEAEGRQAITKTMLGK VGAEEG NT seq 2541 nt NT seq  +upstreamnt  +downstreamnt atggccgaggtgcggcatctgctcagggaataccgggagcggcgggatttcaccaggaca gccgaacccgacgtcacggccgaggcccgcatcggcgaggggctgctcttcgtcgtgcag aaacatgccgcgacgcgcctccactacgatttccgcctcgaatggcagggtgttctgaag agctgggcggtgacgcgcggcccgagcctcgaccctgccgacaagcggctcgcggtgcgg accgaggaccatccgctcgcctatggcgacttcgagggcatcattcccaagggccagtac ggcggcggcacggtcatgctgtgggaccgcggcacctgggagcctgtcggcgaccctgac gagggcctgcgccgcggcaagctgacctttcgccttcacggcgagcggctgtcgggcgaa tgggccctcgtgcgcatggcgccgaagccgggcgacaagcgcgagaactggctgctgatc aagcatcaggaggaaacctccggccggcgccgcccgccggacatcctggcgcgccatacc cgcagcgtcgcctccgggcgcacgatggaggaaatcgccgctggggggcgcacgatcgcc cccgaggatgtggcgccggagcgacgcgcccggcggccggcggcgaaggctgcggagaaa aaggccggcaagggcggccggggcgggcatgcgctgccgcgctgggtggagccgcagctc gccacgctggtcgacgccgcgcccgagggcgggcaatggctgtcggagatgaaatacgac ggctaccgcgccctggtcgccatcggcggcggcacctgccgcgtctatacccgcaacggc aaggactggaccgatcgcttccccgaggtcgcgcaggcggccggccgtctcgacacgtca ggcaccctgatcgatggcgagatcgtcgccttcgacgagaagggcaagaccgacttttcc accctgcaggcggcgctgcaggagggtgggagaggactgacgttcttcgccttcgacctt ctgtggctcgacggcgaggacgttcgcgggcgtcccctcaccgagcgcaaggacctgctg cagcagctcctcggcgaggccgggccgccgctcatctattcgacgcatgtcgtcggcaat gcgcccgaggtgaaccggcggctgtgcgcggccgggcacgaggggatcgtcgccaagcgg gcggaggacgcctaccgctccggccgcgggcgcagctggctgaaggtgaaatgcggagcg cgccaggagttcgtcatcggcggctacaggccgagcgacaagaagggccgcaccgtcgcc tcgctgctgatcggcgtcaacgagggaggcaagctcgtctacaaaggacgggtgggggcc ttcgagggcgaccatctggcgcggctggagcagctcctcgccagccgcggccgcaagacc tcgcccttcgccgagctgccgcgcgatatcgctcgacgggctcgcttcgtgcggccggac atcgtcgtcgaagtcggctttactgaattcacgcgcgaaggcgccgtccgccacggcgtt ctgaagggcatccgggaggacaagccggcgcgcgaggtggtgttggagacacccaggggg acggccatgcaggagcacgaagcgcgggatgtcatcgccggcatcaggctgtccaacccg gacaaggtgctcttcgccgagcagggcgtgacgaaggccgatctggcggcccattacgag cgcgtggccgggcggatcctgcccttcgtctcggaacgtcttctcagcctcgtgcgctgc cccgagggggccggcacacagtgcttcttccagaagcacggcaacaagaccgtggcccgc gagctcaagcgccgcgagatcaccgagagcgacggcgagcgcggcgtctatctctatgtc gacgacctcgcgggtctcgtcgccggcgtgcagatggggacgctcgaatatcacatctgg ggctcgcgcatcgatcgcctcgaccagccggaccggctggtcttcgatctcgatcccgac gaggggctcgacttcgccgccgtgcgcgccgccgccttcgacctgcgcgagcggctcgcg acgctcgggcttcagaccgtgccgctgctgaccggcggcaagggcatccatgtcatcgcc cccctcgtgcgccgggcggattggccgatggtcaaggccttcgcccgcggcttcgcccga ctcatcgccggggaaaatccggaccgttatgtcgcccaggccgcgaaggccaagcgggcc ggccgcatcttcgtcgactggctgcgcaacgagcgcggctccaccgccatcgcgccctat tcgacgcgggcgaagaagaacgcgccggtcgcgacccctgtgggctgggacgagttgcgg accatcgacaccgcccaggccttcaccattgccgacatggagaaacgcctgtcgatgccg gatccctgggcgggtgaagccgaggggcgccaggcgatcacgaagaccatgctcgggaag gtgggtgccgaggagggctga

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