Chelatococcus daeguensis: BOQ54_17190
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Entry
BOQ54_17190 CDS
T04583
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cdq
Chelatococcus daeguensis
Brite
KEGG Orthology (KO) [BR:
cdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdq03000
]
BOQ54_17190
Transcription factors [BR:
cdq03000
]
Prokaryotic type
Helix-turn-helix
Other families
BOQ54_17190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA
AAA_2
HTH_23
IstB_IS21
AAA_3
Mg_chelatase
HTH_50
AAA_16
AAA_22
DUF815
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_38
nSTAND3
HTH_AraC
HTH_30
HTH_IclR
bpMoxR
MCM
HTH_28
Torsin
Motif
Other DBs
NCBI-ProteinID:
APF39255
LinkDB
All DBs
Position
pTAD1:complement(80070..82016)
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AA seq
648 aa
AA seq
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MRQEQAAHIDEVVRVAVGERTARDAVIQESWRRCVDEHKLDPVVLRDAQILPQAQLREHR
DAMDEFLHTARVGLETLYRQVCGLGYVLLLTDAKGVTVDFIGDPTFNDQLHRAGLYLGAD
WAETHMGTCAVGTCIATGEALTVHQSDHFDATHIPLTCTAAPIFDSGGTLAGVLDISALK
SPEPKQSQYLALQLVKSYAHKIENANLLNNFRSEWILKLAASQEFADVDPDCVLAIDAGG
RIIGFNDRARRLLLREAALRSMRNPNPLGAMISDYLDCRIDDLPLFAHSLPTRQRAVRLL
ASGTTLFAQSLPPPARASQQPAPARKAALARPLETLHGGDPMMEEVVARAARLVNTQMSI
LIHGETGTGKEHLAKAIHAASARAGKPFVAVNCAALPETLIESELFGHEPGAFTGAAAKG
KKGLVIEADGGTLFLDEIGDMPLALQTRLLRVLAEREVTPVGRTRPVPVNIRVIAATHRD
LVELVRAGEFREDLYFRLNSAVLALPALRQRADLVWLIGHLMATHGDGALPRRLSPAAMN
ALKAHSWPGNIRELVNCLDYARAVATSDVIDVADLPPTIFEEALLHSPVPSPARAAVPEE
TARAERLVEALRARQWNVSAVAREWGLDRSTIHRRMRRFGIVPPHKLS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggagcaggccgcccatatcgacgaggtcgtgcgggtcgccgtcggcgagcgg
acagcgcgcgatgcggtgattcaggagtcgtggcggcggtgcgtggacgagcacaagctc
gatcccgtcgtgctgcgcgatgcgcagatcctgccccaggcgcaactgcgcgagcatcgc
gacgccatggacgagttcctgcacaccgcgcgcgtggggctcgagacgctctatcggcag
gtctgcggcctcggttatgtgctgcttctcaccgatgccaagggggtcacagtcgatttc
atcggcgatcccaccttcaacgaccagttgcaccgggccgggctctatctgggcgccgac
tgggccgagacgcatatgggtacctgcgccgtcggcacctgcatcgccaccggcgaagcg
ctgacggtgcaccaaagcgaccatttcgacgcgacgcacattccactcacctgcactgcc
gccccaatcttcgattcaggcggcacgctcgcaggcgttctcgacatctcggcactgaag
tcgccggagccgaaacaaagccaatacctcgcgctccaactcgtcaaatcctatgctcac
aagatcgagaacgccaacctcctcaacaatttccgcagcgagtggatcctcaagctggcg
gcgagccaggaattcgccgacgtcgatcccgactgcgtgctggcgatcgatgcgggcggg
cgcatcatcggcttcaacgaccgcgcgcgccgcctcctgctgcgcgaagccgccttgcgc
tcgatgcgcaatccgaacccgctcggggcgatgatcagcgactatctcgactgccggatc
gacgacctgcccctcttcgcccattcgctgccgacgcgccagcgggcggtccggctgctg
gcgagcggcacgaccctcttcgcccagagcctgccgccgccggctcgcgcgtcgcagcag
cctgcgccggcacggaaggcggccttggctcgtccgctcgagacgctccatggcggcgac
ccgatgatggaggaagtcgtcgccagggccgcccggctcgtcaacacgcagatgagcatc
ctcatccatggcgaaacgggcaccggcaaggagcatctcgccaaggccatccacgctgcg
agcgcgcgagcgggaaagcccttcgtcgccgtgaactgcgcggcgctgcccgaaacgctc
atcgagagcgaattgttcggccacgagccgggcgccttcacgggcgctgcggccaagggc
aagaagggcctcgtcatcgaggccgacggcggcacgctcttcctcgacgagatcggcgac
atgccgctcgcgctgcagacccgcctgctgcgcgtgctcgccgagcgcgaggtgacgccc
gtcggccgcacccggccggtgccggttaacatccgcgtcatcgccgccacgcaccgcgat
ctcgtcgagctggtgcgggccggcgaattccgcgaggacctctacttccgcctcaacagc
gccgtgctcgccctgccggcgctgcgccagcgcgccgatctcgtctggctcatcgggcac
ctcatggccacgcacggcgacggcgcgctgccgcggcggctctcgcccgccgccatgaac
gcccttaaggcccattcctggcccggcaacatccgcgagctggtcaattgcctcgactat
gcccgcgccgtcgcgacgagcgacgtcatcgacgttgccgatctgccgccgaccatcttt
gaggaggcactgcttcattccccggtgccatcgccggcccgcgccgccgtcccggaggag
acggcgcgggcggagcgcctcgtcgaggccttgcgcgcgcggcagtggaacgtctcggcg
gtggcgcgggaatggggtctcgaccgctccaccatccaccgtcgcatgcgccgcttcggc
atcgtgccgccgcataaattgagctga
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