Cellvibrio sp. KY-GH-1: D0C16_04245
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Entry
D0C16_04245 CDS
T06422
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03030
DNA replication
ceg03430
Mismatch repair
ceg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0C16_04245
03430 Mismatch repair
D0C16_04245
03440 Homologous recombination
D0C16_04245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceg03032
]
D0C16_04245
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_04245
Enzymes [BR:
ceg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0C16_04245
DNA replication proteins [BR:
ceg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0C16_04245
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0C16_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_29
AAA_16
Mg_chelatase
DUF4368
Motif
Other DBs
NCBI-ProteinID:
QEY15254
UniProt:
A0A5J6P871
LinkDB
All DBs
Position
complement(994114..995160)
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AA seq
348 aa
AA seq
DB search
MSDSSTSSLAWPVHPYPWQLSDWQHLVQQIAAKKLPHALMIAGPKGIGKRHLADALAQLL
LCVSPIEGTPCGRCRGCELNKSQTHPDLLWLEPEEAGKAIKVDQVRDLTESLGKTAQQGG
YKLVIIEPAEAMNGNAANALLKSLEEPAANTLLILVTHAPSAVLPTIRSRCQMRKLPMPR
TEQVLHWLSPLVVGSNITPDALLVAARGAPLTALSLLQGDALEQREQTLQQFVRLTLGQI
SAIEVAANWHGGEVIALVEWLLGLLHSVARWRAGANDPQIALTPVEWRERISNLNLPLLH
RYIEKILVSKRQLLSGANPNKQLLLEELLLDWGALLRASTNRAMASGH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcatctacctcctctcttgcctggcccgtccacccttatccgtggcagtta
agtgattggcagcatctggtacagcagattgcagcaaaaaagcttcctcatgcgctcatg
attgccggccctaaagggatcggcaaacgccatctggccgatgcactggcgcagctgctg
ttgtgtgtatcgcccattgaaggaaccccttgcgggaggtgtcgtggttgcgaactgaac
aaatcccaaacccatcccgacttgctttggcttgagccggaggaggcgggtaaggcaatc
aaggtcgatcaggtgcgtgacctcactgaatcccttggcaaaaccgcgcagcagggcggt
tacaagctagtgattatcgagccggccgaagccatgaatggtaatgcggccaacgccttg
cttaagtcgttggaagaacctgctgccaataccttgttgattcttgtcactcatgcaccc
agtgcggtcctgccgacaatccgcagtcgctgtcagatgcgcaaattaccaatgccgcgc
actgagcaagtgttgcattggttatctcccttagtggttggcagcaacatcacgccggat
gcgctgctggttgcggcacggggcgctccgctaacggcattatccctcttgcagggcgat
gcgcttgagcaacgtgagcaaaccctgcagcaatttgtgcgcttaacgctggggcaaatt
tctgcgattgaagtggctgctaattggcatggtggtgaagtgattgctctggtggagtgg
ttacttggtttgttgcatagcgtggcgcggtggcgggcaggggctaatgatccccaaata
gcgctgactccggttgagtggcgcgagcgaataagtaacctgaatttgcccctgttacat
cgctatattgaaaaaattcttgtatccaagcgccaattattaagtggagcaaaccccaat
aagcaattgttattagaggaattattgctcgattggggcgctttattgcgcgctagcacg
aatcgcgcaatggcgtctggacactag
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