Caenorhabditis elegans (nematode): CELE_C01B7.6 Help Entry CELE_C01B7.6      CDS       T00019                                  Symbol rpm-1 Name (RefSeq) E3 ubiquitin-protein ligase rpm-1   KO K10693   RCR-type E3 ubiquitin transferase [EC:2.3.2.33] Organism cel  Caenorhabditis elegans (nematode) Pathway cel04361   Axon regeneration Brite KEGG Orthology (KO) [BR:cel00001]  09150 Organismal Systems   09158 Development and regeneration    04361 Axon regeneration     CELE_C01B7.6 (rpm-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cel04121]     CELE_C01B7.6 (rpm-1) Enzymes [BR:cel01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.33  RCR-type E3 ubiquitin transferase      CELE_C01B7.6 (rpm-1) Ubiquitin system [BR:cel04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     CELE_C01B7.6 (rpm-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHR RCC1 RCC1_2 ANAPC10 zf-RING_2 zf-B_box ANCHR-like_BBOX zf-RING_11 Nup98_GLEBS SH3_3 Filamin SCNM1_acidic Motif Other DBs NCBI-GeneID:  179259 NCBI-ProteinID:  NP_505267 WormBase:  WBGene00004457 Ensembl:  WBGene00004457 UniProt:  Q17551 LinkDB All DBs Position V:complement(8805399..>8819955) Genome browser AA seq 3766 aa AA seqDB search MSFFLREIDGERVCSTSTETSIPEDRKSARRLRKLLYKCAENTCKPDILRVPAHCGKLDK EEEKSKTPLDQQQQINFHDILNSKFVVGPPSPFALVAIAKSILARFGNPEEVSEKEDGSE EEAGTSGADEEGKQYKNTDQLVGASLTCIFEVLEQLSRRDAELCVQALESLLSLIQSMPI DCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSCLVALSVACGEPEHLGSTIRSLICM KKNIRMSADSTYDMIQMPENLRKLLLKVRRKALGGDNTANSPPNWAMVDVHEHSVASSFS LPSLPDSSPSSDTPDDDNRIHSTMACDGTFLYILNYVGLYKLGTGLNETISGKLYAANQS LQSSKNVQMYLCNGSLYLRRNYSSCISVIDTDSLLDIGEVILPPSCVQHALFTDGTYFYS ATLIANSTLSTIQLNDSFSPSNEPSSRRSHRLTDVKFTIQGDLQVPHQLPEFLPANLHPQ TVDLHFTREMAFIQARSGKVYYAGNGTRFGLFETGNNWMELCLPEPIVQISVGIDTIMFR SGAGHGWIASVDDKKRNGRLRRLVPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMRV NVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPRHS GRQEYQICPIGEHTWLTDTPSVCAQCGLCSARGVACGRVPRPKGTMCHCGVGESTCLRCG LCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTV LLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSV FTFGAFGKGQLARPAGEKAGWNAIPEKVSGFGPGFNAFAGWIGADGDSSIIHSHTALLSS DNILKAQIVANKTNIFIFPREVGKDYIVIRRKLNVFEHHASDYKCWYTSWATDPKYDMLW YYNSAEMEIKGYDIFKKSEKSVGDAFDSLTFLAGAEFAVQVYDSPAYATSMSLGMQLLSA TFSANVINLSEFWKEKHGEREQDHEKTIMDGYSVANRFDGTGGGWGYSANSVEAIQFKVS KEIRLVGVGLYGGRGEYISKLKLYRQIGTEADELYVEQITETDETVYDCGAHETATLLFS QPIVIQPNHWHVVSAKISGPSSDCGANGKRHVECDGVTFQFRKSAVSNNGTDVDVGQIPE LYYQIVGGSESRDESDSNKQLSISRDMSNLFSPAALKNVTAEGIGNLLILLEWALQRVQI DEDTNNQVEGSAENQWSQERAGFVAILSMKLISRFVRTVYKEKGCHDEPGIDFANKLVNL HSMLLEFFFSTDMTGYENRPLIKKEEKVVEEGYTLMKCVSEAVKLFISLSHCFMGSRSLM NAHLIAVMNKGNHEALILTSAIIGSLAKIERFAHQLLCSTTTTERFPMLSSLLLKHFNCE KETLASLTSFPNILRFLYDQTFMRNAYENTSSLAEAILVKVSRDLAIPTDDTLMGPVVHQ TSSRFRRRSAQPTWDMSDGCADAIAFRVDSEGIKLHGFGIYLPTEPDRRNFVGEIMMLSP DSSEKWTCLLRVTAEMSSEEKEVGIVRFPEYVLLSPGVTYAVKVNMMKNTKTFCGEGGVT QVHLLNGARLFFSGCSMSQNGTTVQRGQLPYLIYSILDQSNSLQIKQETIYDTFTLLLRL MANKIGAAITEGGALPACCQHLMSHINPHVMVYMERFPDKALEMMSTMEQLIPMVSNLNG VERVFHSYDSDDSGCDTPYSGIVTTVVESQHPYKPNTSSSMVLLFEEADYICVRFSPDCQ TAQFDDQLTIYLKIDEHSYMPIERCYGSEWPSYPMILPGNCLMFVLDASSAVEGATSEQM FGYHVTVTGYLVGYNDSTMRLEQDLVWLSANACRIMTQLPINPSNIEHLSTAEDDTRHLF EKHGSLLKKGLSLSHSPTLSELCTKGQPPPAQSADLQFLREFLSGHTSTSAGFLAKWLPT GSVVDASKCQLSLSHDDLIVGKAVTLKLLCKDQYDREVDCPKLQVEVFASLGHRNPSSTI HQNLHIGNLPSSLLIHQNPFQPIIVNHTRYMNIAAMPAYANYSVEEIRLGFMIEELVKDR VPLKSSDSSLFSGTWTPTTAGKYRIECKVDGSDISHTYTVEVTERPHRAGKGTITKPSGS RRGAQMTVARTVSIPFSSDFSGIRMRLGTTLASTSVGVIPRGALVEFIEEMDNDDGKWIR LTDETALLYGCNQGVGQVWCLAYHRPLQRELIPLKADTDREKAVKLRRKEIEKESNGSKH HSVSIDAKETYILSPNDVLQVYSTPAPHSMIDGEKIIGPCDLMSSGWLANRHGVWIKLTG VEKYVLQKNDPSSETSLSFSTNGNDEEDLERPIERKKTRLPNALTPSVADCIRAVFAAFV WHEHLVKDLMAAAAYLRFHQNLHNIWQSCEIPSCTNAPAALQPIVKIWREICEVVETSVE QHLIMPPVSNKAMRAETVKPPSRSGGCELCDANITVPLTVHLRMAHPGCGGDCLGYGYNS NGKFTTGWSGECGAGGRGQSPWYLLCNTCRSQYLKKTPAGHHQERTRRWREFRFSTSASD ARPEVIIRQNAMFLLDLNSRLQTESNSSSTATSGWTINLFPTHLSTPSTMPRSQQKRLDV PPNNSVHQNSYMKLGYSSDPGPKVNVIMSPPNQGADQSASLNRPGPSAINEPAEVLQSPS AALRTLFSNTNPSTSALLKRPVLAFCVEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLL RMVSSEYSVSDIILQYLTTLTSYNRLAEYMFSAKKNSNILPHPWRLCFLAGPIAADMVTQ LHAFLHTVSIILQSAGVDGRLKSLCFKSWTLQLTAQEQDLLILTCNILGTVGGILSDTSI LDSDNRFVKEMKDITKFADITASSRQAMVICLTDESGETFWESGEEDKNRSRSLSVQLDE SAHGEILSLFIDNARDEGYRISSIAFKAILEDGRRKDLTSLTLESAYCGWLKCCIKDISH IQIQFKGPNPASRIRQLMILGYPAKTTGTPRLAPSTSHHLFFSDTQRDAFALFQAISSQA FCGELSEDDTLRERVIDLLFSRVQLYPLQNYVYTQVVQAMEKEVELLCDKSKRNYSYCCG LMSLLVRICDSRGNMDSFGQRNSVLTSITQLLIFSPVVVQRQCLNSLECIFASFTPSNVE VPKIIRNLLVVVGKVIQLQVRDKAAHTVVTVHLCSSVLNAPQNWRVDKSIDMDIGRQTAV LVENLCNGTYTPEWSNATKCELANCLLSLIQMPESVSYTETLSTGGKSKAVAVVSSKRFW TAISSLSLIKDKSWLELSERWKTVQDEEDQEPVLLCENHDDGHTVAQVFCVDCDVALCKE CFTVMHLHKKNRNHGVKNLVQSSTQHDINIHQGCARMKFLNFLILFHGEALNGMVEVAAD TLFPTSTSSIQPAMQSSSAFLGIHPMTCRFCGNNVPVEDQSLDGTCTHEDCVNYAKTACQ VMHTCNHFCGGIRNEEECLPCMTCKREDAAQDGDDVCVICFTERLGAAPCIRLGCGHMFH FHCVRMILERRWNGPRIVFRFMQCPLCIQPIEHSGLQDLIEPLKTIRQEVVDKAKMRLEY DGLLTTPALTDPRSEFYNQPEEYALDRYMYVLCHKCKKAYFGGESRCQAALDSSQFNPEE LLCGGCSDTSGVQVCPRHGVEYLEYKCRFCCSIAVYFCFGTTHFCAPCHDDFQRLMSLPK HLLPTCPVGPRSTPMEEQTCPLKMKHPPTGDEFAMGCGICRNISTF NT seq 11301 nt NT seq  +upstreamnt  +downstreamnt atgtcgttcttcttgcgagaaattgatggtgaacgagtgtgttccacgagcaccgaaacg tcgattcctgaagataggaaaagtgcacgaagactgagaaaattgctatacaaatgtgcc gagaacacatgcaaaccggatattctcagggttccagcacattgcgggaaactcgataaa gaagaagagaaatccaaaacacctctggaccagcaacaacaaattaattttcatgatatt ctgaactcaaaatttgttgtgggaccaccttcgccttttgctttagtagcaattgccaaa tcaattcttgcacggtttgggaatccagaagaagtttctgaaaaagaagatggaagcgaa gaggaagccggaaccagtggagctgatgaagagggaaagcaatacaaaaatactgatcag ctggttggagctagtttaacatgtatcttcgaagttctcgagcaattaagtcgacgtgac gccgaactttgtgttcaagctctcgaatcattgttatcattgatccaatcgatgccaatc gattgtcttcagtccgaaaaccgtttatcaatgtctgcaatgatgcacgttctgaaaacg cttcgagaagatgcctgtccctcagtgagctcaaaagctacctcatgccttgtggcttta tcagttgcatgtggagagccggagcatttaggaagcacaattcgatcattaatttgtatg aagaaaaatattcgaatgagcgccgattcgacgtatgatatgatccaaatgccagaaaat ttgagaaaattactactgaaagtgaggaggaaagctttaggcggagacaacactgccaat tccccaccaaactgggcaatggtagatgttcacgagcactcggtagcaagcagtttcagt ctacctagtcttcctgatagctctccgtcttccgacactcccgacgatgacaatcgaata catagcacaatggcatgtgatggaacatttctctacattcttaattatgttggactctac aagttggggaccggcctgaatgaaacaatttctggaaagttgtatgcagcgaatcagagt ttacaatcgtcgaaaaatgtgcaaatgtatttatgcaatggatcattgtatttacgaaga aattactcatcatgcatatcagtgattgacacggattcattgttggatattggagaagtg attctaccaccaagttgtgtacaacatgcactgttcacggatggaacatacttttacagt gcaactctgattgccaattctacactatcgacaattcaactaaatgattcattttcccct tccaatgagccatcatcacgaagaagtcatcgactcactgatgtgaagttcacgattcaa ggagatcttcaagttcctcaccaactccccgaatttctacctgcaaaccttcatcctcaa actgttgatcttcacttcactcgagaaatggcattcattcaagctcgctctggaaaagtg tactacgctggaaacgggacaaggttcggattatttgaaactgggaacaactggatggaa ctgtgtcttcccgagccaatagttcaaatttctgttggaattgatacaataatgtttcgt tctggtgcagggcatggttggattgcaagtgtagacgataagaaaagaaatggaagacta cgtcgacttgttccatctaatcgccggaaaattgttcatgtttgcgcctctggtcatgtc tatggatatgtatctgaaaatggaaagattttcatgggaggacttcatacaatgagagtg aatgtttcaagtcaaatgttaaatggactggataatgtgatgatttcttcattagcgctt ggaaaatctcacggtgttgctgtgactcgaaatggccatctttttacatggggattgaac aatatgaatcaatgtggaagagttgaatcaacttcaaccacgtcttctccaagacattcc ggtcgtcaagagtatcagatttgtcctatcggagaacacacgtggctaactgacacaccc tcggtatgtgctcaatgcgggctttgctccgcacgaggagtagcatgtggaagagttcct cgaccaaagggaaccatgtgtcattgcggtgttggagagtcaacatgccttcgatgtgga ctttgcagaccatgtggagaggttacagaaccagcacagcctggtagagctcagcatgtg caattcagttcaacagctgctcctcaaagaagtactctacatccgtcacgtgtaatttta agtcaaggacctcatgatgtaaaagtttcaagcgtaagctgtggaaattttcatacagta cttcttgcatctgatcgaagagttttcacttttggatccaactgccatggccaattagga gttggagatacacttagcaaaaacactccgcagcaagtcattcttccatctgatacagtt atagtccaagttgccgctggttcaaatcacacaattttgagggcaaatgatggaagcgtt ttcacatttggtgcatttggaaaaggtcagctagcacgaccagctggcgagaaagctgga tggaatgcgatccctgaaaaagtttctggttttggtcctggattcaatgcattcgctgga tggatcggagccgatggtgattcttcaatcatccatagtcatacagctttattatcttct gataatattctgaaagctcaaattgttgcaaacaaaacgaatattttcattttcccaaga gaagttggtaaagactacattgtaataagacgaaagttgaatgtttttgaacatcatgcg agcgattacaaatgttggtatacatcatgggccactgatccgaagtatgacatgctgtgg tattacaattcagcagaaatggaaatcaaaggatatgacattttcaaaaaatctgaaaaa tctgtgggcgatgcatttgattccctaactttcctagctggtgccgaatttgctgtccaa gtgtacgacagtcctgcttatgcaacttcgatgagtcttggaatgcaacttttatcagca acattctcagcaaatgttatcaatttatctgaattctggaaggaaaaacatggggaacga gaacaggatcacgagaaaacaattatggatggttattcagttgcaaatcgatttgatggt acgggaggtggttggggatactcggcaaattctgttgaagctatccaatttaaagtctcc aaggaaattcgattagtaggagttgggctgtatggaggacgaggagaatacatatcgaag ctcaagttatatcgacaaattggaacagaagctgatgagttatatgtggagcagatcact gagactgatgaaacagtttatgattgtggagcacatgagactgcaactcttttattctca caaccaatagttattcaaccaaatcattggcatgtagtcagtgcaaagataagtggtcct tcttctgattgtggagcaaatggaaaacgtcatgtcgagtgcgatggagtaacatttcag tttcgaaaatctgctgtgtcaaacaatggaactgacgtagatgttggacagattccggag ctgtattatcaaattgtcggtggatctgaaagtcgtgacgaatcggattcgaataaacag ctgtcaatcagtagagacatgtcaaatctcttttcacctgctgcactgaaaaatgtcaca gcggaaggaattggtaatttgctgatacttttggagtgggctttacaacgcgttcaaatt gatgaagatacaaacaatcaagttgaaggaagtgctgaaaatcaatggagtcaggaaaga gcaggatttgttgctattttaagcatgaagcttatatcaagattcgtaagaacagtgtac aaagagaagggatgtcatgatgaaccaggaattgattttgctaataagttggtaaatctg cactcaatgctcttagaattcttcttttcaaccgatatgactggatatgaaaatcgtcca ttaattaaaaaagaagaaaaggttgttgaagaagggtatactctgatgaagtgtgtgtcg gaagcggttaagctattcatttctctttctcactgctttatgggatcaagaagtctcatg aatgctcatcttatcgctgtcatgaacaaaggaaatcatgaagctttgatcctaacatct gcaattattggatcccttgctaaaattgaacggtttgctcatcaacttctatgctcgact accacaactgaaagatttccaatgctgtcatcacttcttctgaaacatttcaattgtgag aaagaaacactcgcgtctctcacttcatttccaaatattcttcgatttctttacgatcaa acttttatgagaaatgcgtacgaaaacacgtcaagtttggctgaggccattttggtcaag gtatcgagagatcttgccattccgacagatgatactcttatgggaccagtagtacatcaa acttcgtcgaggttcagaagaagaagtgcacaacctacttgggatatgtctgatggatgt gcagatgcaattgcttttagagtggactccgaagggataaaattacacggttttggaata tatcttccaactgaaccagaccgacggaatttcgttggagaaataatgatgttgtctcca gattcatctgaaaaatggacatgccttcttcgggttactgctgaaatgtcgtctgaagaa aaagaagttggaattgttagatttccagaatatgtacttctttctccaggtgtcacttac gctgtcaaagttaacatgatgaaaaatacaaagacattctgcggagaaggtggagtcact caagtgcatctactcaatggagcccgcttgtttttctcaggatgctcaatgagccaaaat ggaacaacagttcaacgcggacaactaccatacttgatatattcaatccttgatcaatca aacagtcttcaaataaaacaagaaacaatttatgatacattcactctacttcttcgattg atggctaacaaaattggtgccgcaataacagaaggtggagcacttcctgcatgctgtcaa catttgatgtctcatataaatcctcatgtcatggtatacatggaaagattcccagataaa gctttagagatgatgtcaacaatggaacagttgatcccaatggtttcaaatttgaacgga gttgaaagagttttccattcatacgattcagatgacagtggctgtgatacaccatattct ggaattgtgacaactgtggttgagagtcaacatccatacaaaccaaatacatcaagctca atggttttgttgttcgaggaagctgattacatttgtgtccgattttcaccggattgtcaa actgcacaatttgatgatcaactgacaatttatctcaaaatcgatgagcattcttacatg ccaattgaacgttgttatgggagcgaatggccgtcctatccaatgatattgcctggaaac tgtctgatgtttgttttggatgcatcttctgctgttgaaggtgcaacttctgaacagatg ttcggttaccacgtgacagtaaccggatatttagttggttacaatgattctactatgcga ctggaacaagatctcgtttggttgtcagctaatgcttgtcgaataatgacacaattaccg atcaatccgagcaacattgaacatttgagcacagctgaagacgacactcgtcatctattt gagaaacacggaagtcttctgaaaaaaggtcttagcttgagtcattcaccaactctcagt gagctgtgtacaaagggacaaccacctccagcacaatctgctgatcttcagttcttacga gaatttctttctggacatacatcaacatctgctggatttttagcaaagtggcttcctact ggatctgttgttgatgcttcaaaatgtcagctatccttatctcacgacgacttgattgtt ggaaaggcagttactttgaaacttctatgcaaggatcaatatgatcgagaagttgactgc ccgaagcttcaagttgaagtatttgcctcgcttgggcacaggaatcctagttccactatc catcaaaacctgcacattggaaaccttccgtcctcacttttaatccaccagaatccattc caaccgattatcgttaatcacacaaggtatatgaatattgctgcaatgcctgcatatgca aattattccgtggaggagattcgattgggattcatgatagaagaacttgtcaaagatcgg gttcctttaaaatcatctgattcttccttgttctctggtacttggactcccactactgct ggcaaataccggattgaatgcaaagttgacggatctgatatttcccatacctacactgtt gaagtaactgaacggcctcatcgagctggcaaagggacaattacgaagccaagtggaagc cgacgtggtgcacagatgactgtagcgagaactgtttccattccgttttcaagtgatttc tcaggaatacgaatgcgattaggaacaacgttagcatcaacatcagtgggtgttatacca cgtggagctttggtggagtttattgaagaaatggacaatgatgatggaaaatggattcgg cttacggacgaaacagcgttactgtatggatgcaaccaaggagttggccaagtttggtgt cttgcttatcacagaccacttcaacgagaattaattccactgaaagctgatacagatcga gagaaagctgtgaagttaagacgcaaggaaattgaaaaagaatcgaatggaagtaagcat catagtgtttcaattgatgcaaaggaaacatatattttatcaccaaatgatgttcttcaa gtatattccactcctgcacctcattcaatgattgacggtgagaaaattattggaccttgt gatttgatgagcagtggctggttagcaaatcgtcatggagtctggataaaactcactggc gttgagaagtatgtgctccaaaagaatgacccatcttctgaaacgtcactgagcttttcg acaaatggcaatgatgaagaagacttggaaaggccgattgaacgaaagaagacaaggctt ccaaatgctttgacaccatcagttgctgattgtattcgagcagtatttgcagcatttgta tggcacgaacatttagttaaggatttaatggcagcagcagcatatttgagatttcatcaa aaccttcataatatctggcagtcctgtgaaattccgtcgtgtactaatgctcctgcagct ctccaaccaatagtgaaaatttggagagaaatatgtgaagtcgtggaaaccagtgtagag cagcatttgataatgcccccagtttcaaacaaagccatgcgtgcagaaactgtgaagcca ccatcacgaagcggtggatgtgaactttgtgatgcaaacattactgttccattgactgtt catctccgaatggcacatcctggttgtggaggagattgtcttggatatggttacaactca aatggaaagttcaccactgggtggtctggagagtgtggagctggtggtagaggacagtct ccttggtatttgttatgtaatacctgtcgatctcaatatctcaagaaaacaccagctggg caccatcaagaaagaacaagaagatggagagagtttagattttcaacatcagcatcagat gctagaccggaggttattattcggcaaaatgcaatgttcctgttggatttgaatagtaga ttacaaacagaatcaaatagttcgtcaacagctacatctggatggaccattaatctcttc ccaactcacttgagcaccccctcaacaatgcccagaagtcaacagaaaagattggatgtt cctccgaacaactccgttcatcagaattcttacatgaaacttggatattcctcagatccc ggcccaaaagtcaacgtgatcatgtcgcctccaaaccaaggcgcagatcaatcagcttca ttgaacaggcctggtccttcagcaattaacgagcctgccgaagtcttgcagtctccatca gctgctcttcgaacgttattctcaaacaccaatccatcaacctctgcacttttgaaacgt cctgttctagcattttgcgtagagcaccacgatctgaagagaattaaatctgcatgcgtt caatctgttcgtcgagctgttgcattttctcacgcatttcgtgtctggaattggctactt cgaatggtttcatctgaatacagtgtgtctgatatcattctacagtatctaactacgttg acatcttataatcgacttgctgaatacatgttctctgccaagaaaaactcaaacattttg cctcacccatggagactttgttttttagccggtccaattgctgctgacatggtcactcaa cttcacgcattcctccatactgtttcgattattttgcaatctgccggagtagatggtaga cttaaatcgttatgcttcaagtcttggacacttcaactgactgcacaagagcaagatttg ctgattctgacatgcaacatacttgggactgtcggtggtattttgtcagacacttcaatt cttgattccgataaccgatttgtgaaggagatgaaagatataacgaagttcgcggatatc actgcgagtagcagacaagcaatggtaatttgtttgactgatgaaagtggagaaacattt tgggaaagcggagaggaggacaagaatcgaagccgttccctatcagttcagcttgacgaa agtgctcatggcgagatcctctcactttttatagataatgcccgagatgaagggtaccga atcagttcgattgcttttaaagcaattctcgaggacggtaggagaaaggatctgactagt ttgactcttgaatccgcatattgtggatggttgaaatgttgcatcaaagacatcagtcac attcaaattcaattcaaaggaccaaacccagcatctcggattaggcagctgatgattctc ggttacccggcaaaaactactggaaccccgagattagctccatctacttcccatcattta ttcttcagcgatactcaacgtgacgcgtttgcacttttccaagcaatatcatctcaagcc ttttgtggcgaactatccgaagatgatactctaagagaacgggttatagatttactattc agtagagttcaactttatccacttcaaaattacgtgtacactcaagttgttcaagcgatg gaaaaagaggtcgagctgctttgtgataaatcgaagcgaaattattcgtattgttgtgga ttgatgagtttgttggtcaggatttgtgactcaagaggcaatatggatagttttggacaa agaaattcagttctaacttcaattactcaacttcttatattctccccagtggttgttcaa agacaatgtctcaattctttggaatgtatttttgcatcattcactccaagtaatgtagag gtaccaaaaattattcgcaatcttctggtcgtcgttggaaaagttattcaacttcaagtg agagacaaagcagcccatacagttgttactgttcatctttgttcatctgtcttgaatgcg cctcaaaattggcgagttgacaaatcaatcgatatggacattggacggcaaaccgcagta cttgttgaaaacctttgcaatgggacatatacgccagaatggtcaaatgccacaaaatgt gaattggccaattgccttctgagtttgatacaaatgcctgaatcggtgtcttacacggaa acattgtcaactggaggaaagagtaaagcagtcgctgtggttagctcaaaacgtttttgg acagcaatctcatcactatcgctaatcaaggacaagtcatggttggaactttcggaacga tggaagacagttcaagatgaagaggaccaggaaccggttttattgtgtgaaaatcatgat gatggacataccgtagcacaagtgttctgtgtggattgtgatgtggcactgtgcaaagaa tgtttcacagtgatgcatttgcataaaaagaatagaaatcacggagtgaaaaatctagtg caatcgagtacccaacatgatatcaatattcatcaaggatgtgcgagaatgaagttcctc aactttttaattctattccacggagaagctctcaacggaatggtagaagtcgccgctgac actctctttcccacgtcaacttcttccatacaaccggcaatgcaaagttcaagtgcattt cttggcatccatcccatgacatgtcggttctgtggaaataatgttccagtggaagatcag agtcttgatggaacttgtactcatgaggattgtgttaattatgcaaaaaccgcgtgtcaa gtaatgcatacttgcaaccatttctgtggtggaattcgaaacgaagaagaatgtcttccg tgtatgacctgtaaacgagaagatgcagctcaagatggagacgatgtttgtgtaatttgt ttcactgaaagacttggagcagcaccatgtattcgcctcggatgtggtcatatgttccat ttccattgtgttcgaatgattttggaaagaagatggaatggtccaagaattgttttccgt tttatgcagtgtccattgtgcattcaacctattgaacattctggattacaagatcttatc gaaccattgaaaacaattcgacaagaagttgtagataaagcaaaaatgcgtttggaatat gatggtctccttacaactccagctctaactgatccaagatccgagttttacaatcaacca gaggaatatgctcttgatagatatatgtatgtcttgtgtcacaagtgtaagaaagcctac tttggtggagaaagtcgttgtcaagccgcattagatagctcgcagttcaatcctgaagaa ttactatgtggtggttgttcagatacaagcggagttcaagtctgcccaagacatggagtc gaatatctggagtacaaatgccgattctgttgctctattgctgtttatttctgttttggt acaactcatttctgcgcaccttgccatgatgacttccagcgtttaatgtctcttccaaaa catcttcttccaacatgtccagttggccctcgatcaacaccaatggaagaacaaacatgc cccctgaagatgaagcatcctccaactggtgatgaatttgcaatgggttgtggaatttgt agaaatattagtactttttga

Caenorhabditis elegans (nematode): CELE_F07B7.12 Help Entry CELE_F07B7.12     CDS       T00019                                  Symbol rpms-1 Name (RefSeq) PHR domain-containing protein   KO K10693   RCR-type E3 ubiquitin transferase [EC:2.3.2.33] Organism cel  Caenorhabditis elegans (nematode) Pathway cel04361   Axon regeneration Brite KEGG Orthology (KO) [BR:cel00001]  09150 Organismal Systems   09158 Development and regeneration    04361 Axon regeneration     CELE_F07B7.12 (rpms-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cel04121]     CELE_F07B7.12 (rpms-1) Enzymes [BR:cel01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.33  RCR-type E3 ubiquitin transferase      CELE_F07B7.12 (rpms-1) Ubiquitin system [BR:cel04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     CELE_F07B7.12 (rpms-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHR RCC1 RCC1_2 Motif Other DBs NCBI-GeneID:  184118 NCBI-ProteinID:  NP_001343654 WormBase:  WBGene00017190 Ensembl:  WBGene00017190 LinkDB All DBs Position V:complement(8855134..>8862049) Genome browser AA seq 1964 aa AA seqDB search MSFFLREIDGERVCSTSTETSIPEDRKSARRLRKLLYKCAENTCKPDILRVPAHCGKLDK EEEKSKTPLDQQQQINFHDILNSKFVVGPPSPFALVAIAKSILARFGNPEEVSEKEDGSE EEAGTSGADEEGKQYKNTDQLVGASLTCIFEVLEQLSRRDAELCVQALESLLSLIQSMPI DCLQSENRLSMSAMMHVLKTLREDACPSVSSKATSCLVALSVACGEPEHLGSTIRSLICM KKNIRMSADSTYDMIQMPENLRKLLLKVRRKALGGDNTANSPPNWAMVDVHEHSVASSFS LPSLPDSSPSSDTPDDDNRIHSTMACDGTFLYILNYVGLYKLGTGLNETISGKLYAANQS LQSSKNVQMYLCNGSLYLRRNYSSCISVIDTDSLLDIGEVILPPSCVQHALFTDGTYFYS ATLIANSTLSTIQLNDSFSPSNEPSSRRSHRLTDVKFTIQGDLQVPHQLPEFLPANLHPQ TVDLHFTREMAFIQARSGKVYYAGNGTRFGLFETGNNWMELCLPEPIVQISVGIDTIMFR SGAGHGWIASVDDKKRNGRLRRLVPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMRV NVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPRHS GRQEYQICPIGEHTWLTDTPSVCAQCGLCSARGVACGRVPRPKGTMCHCGVGESTCLRCG LCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTV LLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSV FTFGAFGKGQLARPAGEKAGWNAIPEKVSGFGPGFNAFAGWIGADGDSSIIHSHTALLSS DNILKAQIVANKTNIFIFPREVGKDYIVIRRKLNVFEHHASDYKCWYTSWATDPKYDMLW YYNSAEMEIKGYDIFKKSEKSVGDAFDSLTFLAGAEFAVQVYDSPAYATSMSLGMQLLSA TFSANVINLSEFWKEKHGEREQDHEKTIMDGYSVANRFDGTGGGWGYSANSVEAIQFKVS KEIRLVGVGLYGGRGEYISKLKLYRQIGTEADELYVEQITETDETVYDCGAHETATLLFS QPIVIQPNHWHVVSAKISGPSSDCGANGKRHVECDGVTFQFRKSAVSNNGTDVDVGQIPE LYYQIVGGSESRDESDSNKQLSISRDMSNLFSPAALKNVTAEGIGNLLILLEWALQRVQI DEDTNNQVEGSAENQWSQERAGFVAILSMKLISRFVRTVYKEKGCHDEPGIDFANKLVNL HSMLLEFFFSTDMTGYENRPLIKKEEKVVEEGYTLMKCVSEAVKLFISLSHCFMGSRSLM NAHLIAVMNKGNHEALILTSAIIGSLAKIERFAHQLLCSTTTTERFPMLSSLLLKHFNCE KETLASLTSFPNILRFLYDQTFMRNAYENTSSLAEAILVKVSRDLAIPTDDTLMGPVVHQ TSSRFRRRSAQPTWDMSDGCADAIAFRVDSEGIKLHGFGIYLPTEPDRRNFVGEIMMLSP DSSEKWTCLLRVTAEMSSEEKEVGIVRFPEYVLLSPGVTYAVKVNMMKNTKTFCGEGGVT QVHLLNGARLFFSGCSMSQNGTTVQRGQLPYLIYSILDQSNSLQIKQETIYDTFTLLLRL MANKIGAAITEGGALPACCQHLMSHINPHVMVYMERFPDKALEMMSTMEQLIPMVSNLNG VERVFHSYDSDDSGCDTPYSGIVTTVVESQHPYKPNTSSSMVLLFEEADYICVRFSPDCQ TAQFDDQLTIYLKIDEHSYMPIERCYGSEWPSYPMILPGNCLMFVLDASSAVEGATSEQM FGYHVTVTGYLVGYNDSTMRLEQDLVWLSANACRIMTQLPINPSNIEHLSTAEDDTRHLF EKHGSLLKKGLSLSHSPTLSELCTKGQPPPALKHFTYTYSEPQF NT seq 5895 nt NT seq  +upstreamnt  +downstreamnt atgtcgttcttcttgcgagaaattgatggtgaacgagtgtgttccacgagcaccgaaacg tcgattcctgaagataggaaaagtgcacgaagactgagaaaattgctatacaaatgtgcc gagaacacatgcaaaccggatattctcagggttccagcacattgcgggaaactcgataaa gaagaagagaaatccaaaacacctctggaccagcaacaacaaattaattttcatgatatt ctgaactcaaaatttgttgtgggaccaccttcgccttttgctttagtagcaattgccaaa tcaattcttgcacggtttgggaatccagaagaagtttctgaaaaagaagatggaagcgaa gaggaagccggaaccagtggagctgatgaagagggaaagcaatacaaaaatactgatcag ctggttggagctagtttaacatgtatcttcgaagttctcgagcaattaagtcgacgtgac gccgaactttgtgttcaagctctcgaatcattgttatcattgatccaatcgatgccaatc gattgtcttcagtccgaaaaccgtttatcaatgtctgcaatgatgcacgttctgaaaacg cttcgagaagatgcctgtccctcagtgagctcaaaagctacctcatgccttgtggcttta tcagttgcatgtggagagccggagcatttaggaagcacaattcgatcattaatttgtatg aagaaaaatattcgaatgagcgccgattcgacgtatgatatgatccaaatgccagaaaat ttgagaaaattactactgaaagtgaggaggaaagctttaggcggagacaacactgccaat tccccaccaaactgggcaatggtagatgttcacgagcactcggtagcaagcagtttcagt ctacctagtcttcctgatagctctccgtcttccgacactcccgacgatgacaatcgaata catagcacaatggcatgtgatggaacatttctctacattcttaattatgttggactctac aagttggggaccggcctgaatgaaacaatttctggaaagttgtatgcagcgaatcagagt ttacaatcgtcgaaaaatgtgcaaatgtatttatgcaatggatcattgtatttacgaaga aattactcatcatgcatatcagtgattgacacggattcattgttggatattggagaagtg attctaccaccaagttgtgtacaacatgcactgttcacggatggaacatacttttacagt gcaactctgattgccaattctacactatcgacaattcaactaaatgattcattttcccct tccaatgagccatcatcacgaagaagtcatcgactcactgatgtgaagttcacgattcaa ggagatcttcaagttcctcaccaactccccgaatttctacctgcaaaccttcatcctcaa actgttgatcttcacttcactcgagaaatggcattcattcaagctcgctctggaaaagtg tactacgctggaaacgggacaaggttcggattatttgaaactgggaacaactggatggaa ctgtgtcttcccgagccaatagttcaaatttctgttggaattgatacaataatgtttcgt tctggtgcagggcatggttggattgcaagtgtagacgataagaaaagaaatggaagacta cgtcgacttgttccatctaatcgccggaaaattgttcatgtttgcgcctctggtcatgtc tatggatatgtatctgaaaatggaaagattttcatgggaggacttcatacaatgagagtg aatgtttcaagtcaaatgttaaatggactggataatgtgatgatttcttcattagcgctt ggaaaatctcacggtgttgctgtgactcgaaatggccatctttttacatggggattgaac aatatgaatcaatgtggaagagttgaatcaacttcaaccacgtcttctccaagacattcc ggtcgtcaagagtatcagatttgtcctatcggagaacacacgtggctaactgacacaccc tcggtatgtgctcaatgcgggctttgctccgcacgaggagtagcatgtggaagagttcct cgaccaaagggaaccatgtgtcattgcggtgttggagagtcaacatgccttcgatgtgga ctttgcagaccatgtggagaggttacagaaccagcacagcctggtagagctcagcatgtg caattcagttcaacagctgctcctcaaagaagtactctacatccgtcacgtgtaatttta agtcaaggacctcatgatgtaaaagtttcaagcgtaagctgtggaaattttcatacagta cttcttgcatctgatcgaagagttttcacttttggatccaactgccatggccaattagga gttggagatacacttagcaaaaacactccgcagcaagtcattcttccatctgatacagtt atagtccaagttgccgctggttcaaatcacacaattttgagggcaaatgatggaagcgtt ttcacatttggtgcatttggaaaaggtcagctagcacgaccagctggcgagaaagctgga tggaatgcgatccctgaaaaagtttctggttttggtcctggattcaatgcattcgctgga tggatcggagccgatggtgattcttcaatcatccatagtcatacagctttattatcttct gataatattctgaaagctcaaattgttgcaaacaaaacgaatattttcattttcccaaga gaagttggtaaagactacattgtaataagacgaaagttgaatgtttttgaacatcatgcg agcgattacaaatgttggtatacatcatgggccactgatccgaagtatgacatgctgtgg tattacaattcagcagaaatggaaatcaaaggatatgacattttcaaaaaatctgaaaaa tctgtgggcgatgcatttgattccctaactttcctagctggtgccgaatttgctgtccaa gtgtacgacagtcctgcttatgcaacttcgatgagtcttggaatgcaacttttatcagca acattctcagcaaatgttatcaatttatctgaattctggaaggaaaaacatggggaacga gaacaggatcacgagaaaacaattatggatggttattcagttgcaaatcgatttgatggt acgggaggtggttggggatactcggcaaattctgttgaagctatccaatttaaagtctcc aaggaaattcgattagtaggagttgggctgtatggaggacgaggagaatacatatcgaag ctcaagttatatcgacaaattggaacagaagctgatgagttatatgtggagcagatcact gagactgatgaaacagtttatgattgtggagcacatgagactgcaactcttttattctca caaccaatagttattcaaccaaatcattggcatgtagtcagtgcaaagataagtggtcct tcttctgattgtggagcaaatggaaaacgtcatgtcgagtgcgatggagtaacatttcag tttcgaaaatctgctgtgtcaaacaatggaactgacgtagatgttggacagattccggag ctgtattatcaaattgtcggtggatctgaaagtcgtgacgaatcggattcgaataaacag ctgtcaatcagtagagacatgtcaaatctcttttcacctgctgcactgaaaaatgtcaca gcggaaggaattggtaatttgctgatacttttggagtgggctttacaacgcgttcaaatt gatgaagatacaaacaatcaagttgaaggaagtgctgaaaatcaatggagtcaggaaaga gcaggatttgttgctattttaagcatgaagcttatatcaagattcgtaagaacagtgtac aaagagaagggatgtcatgatgaaccaggaattgattttgctaataagttggtaaatctg cactcaatgctcttagaattcttcttttcaaccgatatgactggatatgaaaatcgtcca ttaattaaaaaagaagaaaaggttgttgaagaagggtatactctgatgaagtgtgtgtcg gaagcggttaagctattcatttctctttctcactgctttatgggatcaagaagtctcatg aatgctcatcttatcgctgtcatgaacaaaggaaatcatgaagctttgatcctaacatct gcaattattggatcccttgctaaaattgaacggtttgctcatcaacttctatgctcgact accacaactgaaagatttccaatgctgtcatcacttcttctgaaacatttcaattgtgag aaagaaacactcgcgtctctcacttcatttccaaatattcttcgatttctttacgatcaa acttttatgagaaatgcgtacgaaaacacgtcaagtttggctgaggccattttggtcaag gtatcgagagatcttgccattccgacagatgatactcttatgggaccagtagtacatcaa acttcgtcgaggttcagaagaagaagtgcacaacctacttgggatatgtctgatggatgt gcagatgcaattgcttttagagtggactccgaagggataaaattacacggttttggaata tatcttccaactgaaccagaccgacggaatttcgttggagaaataatgatgttgtctcca gattcatctgaaaaatggacatgccttcttcgggttactgctgaaatgtcgtctgaagaa aaagaagttggaattgttagatttccagaatatgtacttctttctccaggtgtcacttac gctgtcaaagttaacatgatgaaaaatacaaagacattctgcggagaaggtggagtcact caagtgcatctactcaatggagcccgcttgtttttctcaggatgctcaatgagccaaaat ggaacaacagttcaacgcggacaactaccatacttgatatattcaatccttgatcaatca aacagtcttcaaataaaacaagaaacaatttatgatacattcactctacttcttcgattg atggctaacaaaattggtgccgcaataacagaaggtggagcacttcctgcatgctgtcaa catttgatgtctcatataaatcctcatgtcatggtatacatggaaagattcccagataaa gctttagagatgatgtcaacaatggaacagttgatcccaatggtttcaaatttgaacgga gttgaaagagttttccattcatacgattcagatgacagtggctgtgatacaccatattct ggaattgtgacaactgtggttgagagtcaacatccatacaaaccaaatacatcaagctca atggttttgttgttcgaggaagctgattacatttgtgtccgattttcaccggattgtcaa actgcacaatttgatgatcaactgacaatttatctcaaaatcgatgagcattcttacatg ccaattgaacgttgttatgggagcgaatggccgtcctatccaatgatattgcctggaaac tgtctgatgtttgttttggatgcatcttctgctgttgaaggtgcaacttctgaacagatg ttcggttaccacgtgacagtaaccggatatttagttggttacaatgattctactatgcga ctggaacaagatctcgtttggttgtcagctaatgcttgtcgaataatgacacaattaccg atcaatccgagcaacattgaacatttgagcacagctgaagacgacactcgtcatctattt gagaaacacggaagtcttctgaaaaaaggtcttagcttgagtcattcaccaactctcagt gagctgtgtacaaagggacaaccacctccagcactaaaacattttacatatacatattca gaacctcaattttga

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