Caenorhabditis elegans (nematode): CELE_C18H9.3
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Entry
CELE_C18H9.3 CDS
T00019
Symbol
gyf-1
Name
(RefSeq) GYF domain-containing protein gyf-1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_C18H9.3 (gyf-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CELE_C18H9.3 (gyf-1)
Surveillance factors
Other surveillance factors
CELE_C18H9.3 (gyf-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
174103
NCBI-ProteinID:
NP_001343746
WormBase:
WBGene00016002
LinkDB
All DBs
Position
II:<6684235..>6692729
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AA seq
1106 aa
AA seq
DB search
MSSVSSAEPTAQQNFNPSCHFRMRPNAANRGGSISSGNNRSSGFGGGGFDDGGDEISSSA
IAAAAAAVLSSPVVSEFSYTRERLLELAPTGSIMPDALRDQLFFNEKNLPLVSNTPLSEH
EQKLQHNINSSKAMSLLSHADRASIAAGAAYGSGYGAASGALQNGQSPTSRWAPKSSWNK
GTPDRGTGTTPRGGGSVGRASGAFFAGRGGGRIGGENGFGGATNGGSPAAQNEDSPGTYQ
SKFNALRRGGGAGSVGRGGSTTGSAFNTRADALYNPNDPTDRPKAVNPAATRSESDEEEE
EGWSKVGSTSRTSTNAAPQSSERPAWARSESWIQRTQQQQQQQQQQSTQQQAQPPITLWN
NREVGSDSTVWKDRNHMVAAVRKASTENHPPQQQQQQQQRSSAPVSAPSRQESESTDVPN
LPIPTYPSDPSAWSNNSMGGGIFYQPTPQPPAPIVKEEPVQFYYMDPTETRRGPFPKDQM
NVWFKAGYFTDESLRVQRGENGEYKTIGDLKKLHGSSTPFEYLEDIEPPRPILPSIPYPS
ATNPLYPAAFGGVNMWSSMGQPTDVYMMQTNFEQQLVAERNRLLDDHNRRLAEEAEKMAK
FQEAMYRQLTMQHEQRVREQELLLQKRAEEIEKREAESKREEAARLQKLEQEAREIEERK
AALEAEDRRKREIEEYNRMCEKKKNEIIAKEAADRMRLEEATERERRRLEAESRVAEEKI
RRDRVRAELEAREREEERKRAAERERIARETASLQQQAELDAAWAGKKIATVTTSNSAFT
GAPKQVSPSGSEESDEWISTSKEVKHTKTAPWAAKVEAPQKSEKTLLEIQKEEERKFKVE
QEKNAKLKAKEQASNITSAAAIAGDKSGGLWGASKTWAAPESNSSKSYVSPFLDGPSLEA
ANKMALQKKNSQPKIAVPAKSAPTSAKVATPVKAKATAVAVSSPATNQKTKKTKEQVATD
ELQQWFVKRFQQFSTQVDSSTLFDCIMSLENPNEVEDIVMSYLDESKTVKEFVREFIKRR
IAMRAAGGRPDADDLTSARTAAAAPSDSNSGSNSNSGNGQGKKKKKTQKQVLDGNILGFR
GTAAADRLNKGEIDAVPSAPVNPSRR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagtttcgtccgccgagccaactgctcaacaaaatttcaatccaagctgtcat
ttcaggatgcgtccaaatgctgctaaccgtggtggctcaatttcttcgggaaacaatcgt
tcctctggatttggtgggggtggatttgacgatggcggcgatgaaatctcctcttcggca
atcgctgctgcagccgccgcggtcctctcttcgccagtggtttcggaattctcgtacacg
cgcgaacgtcttctcgagctggctccaaccggatcgattatgcctgatgcgttgcgcgat
cagctatttttcaacgagaagaacctgccgctcgtctcgaacacgcctctcagtgaacat
gaacagaaactgcaacacaacataaactcttcgaaagcaatgtctcttttatcgcacgct
gatcgagcctcaattgctgctggagctgcttatggaagtggatatggagccgcttccgga
gcacttcaaaacggacaatcaccaaccagtcgctgggctccgaaatcatcttggaataaa
ggcacaccggatcgtggcaccggtacaactcctcgtggtggtggatctgttggtcgagca
agtggagcattctttgcaggccgtggtggcggacgaatcggcggagaaaacgggtttggc
ggcgcgaccaatggtggctcgccagctgctcaaaacgaagattctcctggaacatatcaa
tcaaagttcaatgcacttcgtcgtggcggtggcgcgggaagcgtcggtcgtggtggcagc
acgacgggttcagcttttaacactagagctgacgctttgtacaacccgaacgatccaact
gatcgtccaaaggcggtgaatcctgctgcaactcgaagcgagagcgatgaagaagaggag
gaaggatggtcgaaagttggaagtacatctcgaacctccaccaatgcggcccctcaatca
tctgaacgtcctgcttgggctcgttctgaatcttggattcaacgtacacagcaacaacag
caacaacaacagcagcaatcgactcagcagcaagcacaacctccaattactctgtggaat
aatcgagaagttggttctgattcaactgtttggaaagatcggaatcacatggttgctgcg
gttagaaaggcatccacagaaaatcatccaccacaacaacaacagcaacaacaacaacgt
tcatctgctccagtttctgctccttctcggcaagagagtgaatcaacggatgttccgaat
cttcctattcctacatatccttctgatccatcagcgtggtctaataattcgatgggaggt
ggtattttctatcaaccaacgccacagccaccagctccgattgtaaaagaagaacctgtt
cagttttactacatggatccaacagaaactcgtcgtggtcctttccctaaagatcaaatg
aatgtatggttcaaagcgggttattttacggatgaatcacttcgagttcagagaggcgaa
aacggagaatataaaacgatcggtgacctcaaaaaattgcatggatcctcgacgccattt
gaatatttggaagatattgagcctccacgcccaattttgccgtcgatcccttacccgtcc
gcgacgaatcctttgtatccagctgcatttggtggagtgaacatgtggtcaagcatgggt
caacctactgatgtatatatgatgcagacaaattttgaacagcagctggtagccgagcgc
aacagacttctcgatgatcacaacagacgcctcgccgaagaggccgaaaaaatggccaaa
tttcaagaagctatgtaccgtcaactgacaatgcagcatgagcaacgtgtgagagaacag
gaacttcttttgcaaaaacgtgcggaagaaatcgaaaaacgtgaggctgaatcgaagaga
gaagaagccgcgcgtctccagaagttggagcaagaagcacgtgaaatcgaagaacgaaaa
gctgccttggaagctgaggatcgtcgaaagagagaaattgaagagtataacagaatgtgt
gaaaagaagaagaacgaaattattgcaaaagaagctgccgatagaatgcgccttgaagaa
gctactgaacgagaaagacgacgtctggaagctgaatcacgcgtggcagaagaaaagatt
cgacgggatcgtgtgagagcggaacttgaggcacgtgaaagagaagaagagcgaaaaaga
gctgccgaacgagagagaatcgctcgtgaaactgcttcccttcaacaacaggctgagcta
gacgccgcttgggctggaaagaaaattgcgacagtaaccacttccaactctgcattcact
ggtgcaccgaagcaagtatcacctagtggcagtgaagaatcagatgaatggatctctacc
agcaaggaagttaagcacacgaaaactgctccatgggctgcaaaggtcgaagctcctcaa
aaaagtgagaagacattgcttgagattcagaaagaagaagaacgtaaattcaaagtggag
caggagaagaacgccaagttgaaggcaaaagaacaagcttccaatatcacatccgctgct
gctatcgctggagacaaaagtggtggactttggggagcatccaagacttgggctgctcca
gagtcaaatagctcaaaaagctatgtttctccattccttgatggaccatctttggaagca
gcgaacaagatggctttgcaaaagaagaactcccagccaaagatagctgttccagccaag
tctgctccgacttcagcaaaagttgccactccagtcaaagcaaaagcaacagcagtggcc
gtatcgtctcctgctaccaatcaaaagacgaaaaagaccaaggaacaggttgctacggat
gagttgcagcagtggtttgtcaaacgattccagcagttttcgactcaagttgattcttcg
accctgttcgattgcataatgtcacttgaaaatccaaatgaggtcgaagatattgtcatg
tcgtacttggacgaatcgaaaactgtgaaggaatttgttcgcgaattcatcaagcgtcgc
attgcaatgcgtgctgctggaggtcgtccagatgccgacgatttgacttctgctcgtact
gccgccgctgctccatccgattccaactctggatccaactcgaattctggaaatggtcag
ggcaagaaaaagaagaagactcaaaagcaagttctcgatggaaatattctcggattccgt
ggaactgctgccgctgaccgtcttaacaagggcgaaatcgacgcagtcccatcggctccg
gtgaatccttcgcgccgttag
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