KEGG   Caenorhabditis elegans (nematode): CELE_C26C6.1
Entry
CELE_C26C6.1      CDS       T00019                                 
Symbol
pbrm-1
Name
(RefSeq) Bromo domain-containing protein
  KO
K11757  protein polybromo-1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CELE_C26C6.1 (pbrm-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cel03021]
    CELE_C26C6.1 (pbrm-1)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_C26C6.1 (pbrm-1)
Transcription machinery [BR:cel03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CELE_C26C6.1 (pbrm-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    CELE_C26C6.1 (pbrm-1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 Zap1_zf1 zf-C2H2_aberr HP0268
Other DBs
NCBI-GeneID: 172504
NCBI-ProteinID: NP_001021008
WormBase: WBGene00007042
Ensembl: WBGene00007042
UniProt: G5EEY5
LinkDB
Position
I:7495437..7503582
AA seq 1883 aa
MSTKRKRAAEPDPEKDVASTSTASKKRKGRMTIAEKEKREFEMAKGNYVMAQIRKHRSSA
GNNSVFESFLRLPPRRFEPEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNN
LTYYKDESEEHKDMMKIQELFEAATAKVKSGEYLDDAEDEEGDEDVEETVQEEEEPEESG
TSSRDSTPMDLDHFMLCDLLGAVLEATDNTGRLLCPPFRVLQSREDFPLYYEKIAKPIDL
KTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDIFKDAEQLKTVVKEKIARLEEK
GVHPMRRAKATRLVDALLTAVAVNENFSEDSEEDEETETNSEPMWKLYWTIRNAVHEKDR
NVTLADNFLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKYDLKSLVADLMQMYSNAFD
YNLESSEVYISAEKLKALTISTCKQLVPSFDVSQYEPAPAQLTPVKPKATPHRARIKIEM
PDTDSEDSRTPPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAYMKQKAMMQGLW
NVIHSYRVASNPGHWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAM
INDCRVMFSNARDFNEPRSMIHMDAIQLEKAVLRAYEGMRNTSLGSSIPSTPHSSSSNLM
KAMKLKTPKSEVRGRGKKNFSGSDDEESARINIQQHQRSMEDAIMQLPIEEQKMWRLFKS
MKDVREEGTNRPLAVNFMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSD
FMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDAPRVQVELRTIFTSIFASL
FSKKDEEGKCYSDHLTEFTEVLKANGVPSSEWPFTLDQIKMNIDKCRYRRLDKLQKDFFD
LFERARELSKAGSSMYEAACTLQKSFIVERDTRCKDLIHSNAYCVIEKDIDEAIEKERSL
KAKEEHDEEGGNKPAMVKRHESEVEMEDIEIDGTKYVAPCYAYVSRSDEKKTPLHIFRIE
RTFKDENGEKALQGHWVYRPEETLHLASRKFMKQEVFLTPFRDTVLAERLRGRCVVISLS
TYTSKVITEYSEEDVYLCEYKYHGKPKYFAKLRTWPFTAEDEELEYTKRTKLMTPKRNLT
AVDSDGNEGKDDVIVDGEEEEDEEDRARLEVSLDMERFELEASKDEESGKTYFQQIRSET
GKFFWLGQCVLVFNNMKPLCDVMKINKIWREKDGSEWFSGCWFARPSETIHDEGRLFFKN
EVIAVYRNDETRKLCEIQRVCDVMPAKLYIKQRQTEVSECDVFVCETMVNGSADTPDDCS
LFGFQSIVDEFSDAQTMNLDYGKAMRKMKAHKLHVSIPNEEVLFYKQPIKMDKELSPLLK
GEGVMPLDHLDEMMDDDTDGSESVSSSIHPKILKEGSPPATVQSQTSSVSTPPQHPSISA
EMPIMTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEM
RAEVVAVEKAKQDAIKASQAMTLLPGQVRIYQCKWAACDSQYDTESALLEHVIQHHTSQI
IMDSDQQFVCMWMTCLRNRKDGKPFPSLPRLHRHIKEKHMPTAAKNIYSNQLGKNFFKSI
PNQGDTPGCRIVSAPYGQLPTAPSNGGIPPQQQHQQQQHHGNGMNGNMQQGAPQVINRHP
VSQQMHHQHPQHMQQHHDHHPHQQHYQQGGQPHPQMQMGPPQNGMFQQGSSSSQQYHQAP
PQQMIQQQHQQPGPPPQQQQPQMQPIVVTDVGRTVVRAVVPAFVAPPNQIHSRRVLHSEA
YLKYIESLAQNRQKSVSRWERTLGATARNTQPAGNARAPSHWIRRIENGRPVAREEDVTK
ALWKLRDELLKSTCSLVMDRPTQ
NT seq 5652 nt   +upstreamnt  +downstreamnt
atgagtacgaaaagaaagcgtgctgccgagcccgacccggaaaaggatgttgcttccact
tctaccgcttccaagaagcggaaaggacgaatgacaattgcggaaaaggaaaagcgagag
tttgagatggcgaagggtaattatgtgatggcacagattcgaaaacatcgaagttccgcc
ggcaataattctgtattcgagagttttctccgattaccgccacgccgcttcgagcctgaa
tattatgagcaagtaaaagagccgattgatgttaccacaatccaacataaactgaaaatt
cccgaatatttgacgtatgatcagtttaatgatgatttcatgatgttcattaaaaacaac
ctcacttactacaaagacgaatctgaagaacacaaggatatgatgaaaattcaagaactt
ttcgaggctgctaccgctaaggtgaaatctggagaatatctagatgacgcagaggacgaa
gagggagacgaagatgtggaagagacagttcaggaagaggaagaacctgaagagagtgga
acatcatctcgtgattcgacacctatggacctggatcacttcatgctttgtgatcttttg
ggagcggttcttgaagcgactgataacaccggaaggcttctttgcccaccattccgagtt
cttcaaagtcgagaagatttcccattgtactatgagaaaatagctaaaccaattgatctc
aaaacgattgctcaaaacggagtgaacaagaagtattccacaatgaaagaactcaaagat
gatctattcctgctcttcaaaaatgcacagcagtttagtggaaacggtagtgatattttc
aaagatgctgaacaattgaaaactgttgtgaaagaaaagattgctcgattggaagagaag
ggagttcatccaatgagaagagccaaagccacacgactcgttgatgctttgttaaccgct
gttgcagttaatgaaaacttctcagaagattcagaagaggacgaagaaactgaaacaaat
tcggagcctatgtggaagttgtattggacaatcagaaatgctgttcacgagaaagatcga
aatgttacgctggctgacaactttttggaacttccaagcaaagaatcttaccccgactac
tatgatgagatcaaaaaccctgtgtcaattttcatgataaataaaagattgaaaaatggg
aaatatgatttgaaatctctcgtcgctgatctcatgcaaatgtattcaaatgctttcgac
tacaatcttgaatcatcagaagtctacatttctgcggaaaagctgaaggcactaacgata
tccacgtgcaagcaacttgttccttcattcgatgtttctcaatacgaacctgctccggca
caacttacaccagtgaaaccaaaagcgacaccacacagagctcgaattaagattgagatg
ccggacacagactcggaagatagtaggactccacctcctactcataaaaggaaatctccg
aaaaaacctcgtgaaaatggaagtgttcctactccaacttttaaaggcagaaaatcgacg
atccctgtcgatccaaatgctgcttatatgaagcaaaaagcaatgatgcaagggctttgg
aacgttatccattcctacagagtcgcttcgaatccgggacattggccagcgggagcattc
atacaattgccatctgccaaacaatatccagaatactatcaaattattcaaaatccgatt
gatatgaaaacgattcggatgagaatagatggacatcagtatccacaggttgatgcaatg
atcaacgattgtcgagtgatgttttcgaatgctagagatttcaatgaaccccgttcaatg
atacacatggatgctattcaactagagaaagcagttttgcgagcttatgaaggaatgaga
aacacgtcactgggctcttcaataccgtcaactcctcattcgtcatcgtcaaatcttatg
aaagcaatgaaactaaaaactccgaaatccgaggtccgtggtcgcggtaaaaagaacttt
agtggatctgatgatgaggaatcagctcgaattaacatacaacaacatcaaagaagcatg
gaggatgctataatgcagcttccaatcgaagagcaaaaaatgtggagattgttcaaatct
atgaaagatgttcgtgaggaaggaaccaaccgtccattggctgtaaacttcatgcgtctt
ccatcaaaggaggaatttcctgcatattatgacgtcattaaaaagccgatggatatgatg
aggatcaagcataagctggagaatcgtcagtatgtaacactgcttgatgtggtttctgat
ttcatgctaatgctttctaatgcctgcaaattcaatgagactgattctgacatctacaag
gaagcagtttctcttcagaaggcacttttggaaatgaagcgagagcttgataccggagat
gatgcaccaagagttcaggttgaattgagaaccatatttacttcaatatttgcctcgctg
ttcagtaagaaagatgaagaaggaaaatgttattcggatcatttaactgaatttacggaa
gttctcaaagcgaatggagtaccttcatctgaatggccattcactcttgatcaaattaag
atgaatatagataaatgccgttacagacgactcgataagcttcaaaaggactttttcgat
ctgttcgaaagagcaagagaactctcaaaagcaggctcttcaatgtacgaagcagcatgt
acacttcaaaaatcatttattgttgaacgtgatacacgatgcaaagatttgatacactca
aatgcgtactgtgtaattgaaaaagatattgatgaagctattgaaaaggaaagaagcttg
aaggcaaaagaagaacatgatgaggagggaggaaacaaaccggcgatggtgaaaagacat
gaaagcgaagtcgaaatggaagatattgaaatcgatggaacgaaatatgtggcaccatgt
tacgcatacgtttcccgatctgacgagaagaaaactcctcttcacattttccgaattgaa
cgaacttttaaagacgagaatggggaaaaagctcttcaaggacattgggtttaccgtcct
gaagaaactcttcatttggcaagccgaaagttcatgaaacaagaagtttttcttacgcct
ttccgagatacagtacttgctgaacgtctacgaggacgatgtgtcgtcatttcactttcc
acgtacacttcaaaagtaatcaccgagtacagtgaagaagatgtatatctctgtgagtac
aagtatcatggaaaaccaaaatactttgctaagctgagaacctggccattcactgctgaa
gacgaggaattggagtatacaaagagaacaaaactaatgactcctaaacggaatttgaca
gcagttgattctgatggaaacgaaggaaaagacgatgtaattgttgatggagaagaagaa
gaagatgaagaagatcgtgctcgtcttgaagtatcattggatatggaaagatttgagttg
gaagcgtcaaaagatgaagaatctggaaaaacatacttccaacaaatccgttctgaaact
ggaaagtttttctggctcggacaatgtgttctggtgtttaacaatatgaagccgttgtgt
gatgtgatgaagattaataagatttggagagaaaaagacggttctgagtggttttccggc
tgctggtttgctcgtccatctgaaacaattcacgacgagggacgacttttcttcaagaat
gaggttattgcggtgtatcgaaacgacgaaactcgtaaattgtgcgagattcagagagtt
tgtgacgttatgcctgctaagctgtatataaaacagcgacagactgaagtatcggaatgt
gatgtttttgtttgtgaaacaatggtcaacggatcagcagatacacctgacgattgttct
ttgtttggttttcagagtattgtcgatgagttcagtgatgctcaaacaatgaatctcgat
tatggaaaggcaatgcgtaagatgaaggctcacaaacttcacgtttcaatcccgaatgaa
gaagtgctgttttacaaacaaccaataaaaatggacaaagaactctcaccactattgaaa
ggcgaaggcgttatgccactggatcatctggacgaaatgatggacgacgatacggatgga
agtgaatcggtgtcaagcagtattcatccgaagatcctgaaagaaggatcacccccagct
acagttcaatcgcagacttcttcagtttcaacacctccacaacatcccagtatatcagca
gaaatgcctattatgacaccaaaagcagttaagagcaagagtggatacattttgttctct
gctgaagttcgtaagaggataatgcatgaaaatccagacgcaggattcggtgaagtttcc
aagatagttggtattgagtggaaaaaattgtcggaagaacaaaagaagcattacgagatg
cgtgcggaagtcgtcgctgttgagaaagccaaacaggatgccattaaagcatcgcaagcg
atgacccttttgcccggacaagtgaggatatatcagtgtaaatgggctgcttgtgattca
caatatgataccgaatcggcccttctggagcatgttatccaacatcatactagtcaaatt
attatggacagtgaccagcaattcgtatgtatgtggatgacgtgtctacgtaatcgaaaa
gacggaaaaccattcccatcgcttcctcgacttcaccgtcacattaaagaaaaacatatg
cctacggcggcgaaaaacatttactccaaccagctaggcaagaatttttttaagtcgata
ccaaatcaaggagacactcctggatgccgtatagtatctgcgccttacggacaattacca
actgcaccatcaaatggtggaattccccctcaacaacaacatcaacaacagcagcatcat
ggaaatggaatgaacggaaatatgcaacaaggcgctccacaagttataaacaggcatcct
gttagccaacaaatgcatcatcagcatccacagcatatgcagcaacatcacgatcatcat
ccacatcagcagcattatcagcaaggtggccaacctcatccacagatgcaaatgggacca
ccacaaaacggaatgttccaacaaggatcttcttcatctcaacaatatcatcaggcacca
cctcaacaaatgattcaacaacaacatcaacaacctggtccacctccacaacagcaacaa
ccacaaatgcaacctatcgtggttacagatgttggacgaactgtagttcgagcagttgta
cctgcatttgttgcaccaccgaatcaaattcattcgagaagagttctacattcggaagca
tatctcaagtatatcgaatcacttgcccagaatcgacagaagtcggtaagccgatgggaa
cgaactctaggagcaactgccaggaatacccaaccagctggaaatgcccgcgctccatct
cattggataaggagaattgaaaacggacgacctgtagctcgcgaagaggatgttacaaaa
gctttgtggaaacttcgcgatgaattgttgaagagtacgtgtagtcttgtaatggaccga
ccaactcaatga

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