Caenorhabditis elegans (nematode): CELE_C26C6.1
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Entry
CELE_C26C6.1 CDS
T00019
Symbol
pbrm-1
Name
(RefSeq) Bromo domain-containing protein
KO
K11757
protein polybromo-1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_C26C6.1 (pbrm-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_C26C6.1 (pbrm-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_C26C6.1 (pbrm-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CELE_C26C6.1 (pbrm-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
CELE_C26C6.1 (pbrm-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Zap1_zf1
zf-C2H2_aberr
HP0268
Motif
Other DBs
NCBI-GeneID:
172504
NCBI-ProteinID:
NP_001021008
WormBase:
WBGene00007042
Ensembl:
WBGene00007042
UniProt:
G5EEY5
LinkDB
All DBs
Position
I:7495437..7503582
Genome browser
AA seq
1883 aa
AA seq
DB search
MSTKRKRAAEPDPEKDVASTSTASKKRKGRMTIAEKEKREFEMAKGNYVMAQIRKHRSSA
GNNSVFESFLRLPPRRFEPEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNN
LTYYKDESEEHKDMMKIQELFEAATAKVKSGEYLDDAEDEEGDEDVEETVQEEEEPEESG
TSSRDSTPMDLDHFMLCDLLGAVLEATDNTGRLLCPPFRVLQSREDFPLYYEKIAKPIDL
KTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDIFKDAEQLKTVVKEKIARLEEK
GVHPMRRAKATRLVDALLTAVAVNENFSEDSEEDEETETNSEPMWKLYWTIRNAVHEKDR
NVTLADNFLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKYDLKSLVADLMQMYSNAFD
YNLESSEVYISAEKLKALTISTCKQLVPSFDVSQYEPAPAQLTPVKPKATPHRARIKIEM
PDTDSEDSRTPPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAYMKQKAMMQGLW
NVIHSYRVASNPGHWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAM
INDCRVMFSNARDFNEPRSMIHMDAIQLEKAVLRAYEGMRNTSLGSSIPSTPHSSSSNLM
KAMKLKTPKSEVRGRGKKNFSGSDDEESARINIQQHQRSMEDAIMQLPIEEQKMWRLFKS
MKDVREEGTNRPLAVNFMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSD
FMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDAPRVQVELRTIFTSIFASL
FSKKDEEGKCYSDHLTEFTEVLKANGVPSSEWPFTLDQIKMNIDKCRYRRLDKLQKDFFD
LFERARELSKAGSSMYEAACTLQKSFIVERDTRCKDLIHSNAYCVIEKDIDEAIEKERSL
KAKEEHDEEGGNKPAMVKRHESEVEMEDIEIDGTKYVAPCYAYVSRSDEKKTPLHIFRIE
RTFKDENGEKALQGHWVYRPEETLHLASRKFMKQEVFLTPFRDTVLAERLRGRCVVISLS
TYTSKVITEYSEEDVYLCEYKYHGKPKYFAKLRTWPFTAEDEELEYTKRTKLMTPKRNLT
AVDSDGNEGKDDVIVDGEEEEDEEDRARLEVSLDMERFELEASKDEESGKTYFQQIRSET
GKFFWLGQCVLVFNNMKPLCDVMKINKIWREKDGSEWFSGCWFARPSETIHDEGRLFFKN
EVIAVYRNDETRKLCEIQRVCDVMPAKLYIKQRQTEVSECDVFVCETMVNGSADTPDDCS
LFGFQSIVDEFSDAQTMNLDYGKAMRKMKAHKLHVSIPNEEVLFYKQPIKMDKELSPLLK
GEGVMPLDHLDEMMDDDTDGSESVSSSIHPKILKEGSPPATVQSQTSSVSTPPQHPSISA
EMPIMTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEM
RAEVVAVEKAKQDAIKASQAMTLLPGQVRIYQCKWAACDSQYDTESALLEHVIQHHTSQI
IMDSDQQFVCMWMTCLRNRKDGKPFPSLPRLHRHIKEKHMPTAAKNIYSNQLGKNFFKSI
PNQGDTPGCRIVSAPYGQLPTAPSNGGIPPQQQHQQQQHHGNGMNGNMQQGAPQVINRHP
VSQQMHHQHPQHMQQHHDHHPHQQHYQQGGQPHPQMQMGPPQNGMFQQGSSSSQQYHQAP
PQQMIQQQHQQPGPPPQQQQPQMQPIVVTDVGRTVVRAVVPAFVAPPNQIHSRRVLHSEA
YLKYIESLAQNRQKSVSRWERTLGATARNTQPAGNARAPSHWIRRIENGRPVAREEDVTK
ALWKLRDELLKSTCSLVMDRPTQ
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaaaagaaagcgtgctgccgagcccgacccggaaaaggatgttgcttccact
tctaccgcttccaagaagcggaaaggacgaatgacaattgcggaaaaggaaaagcgagag
tttgagatggcgaagggtaattatgtgatggcacagattcgaaaacatcgaagttccgcc
ggcaataattctgtattcgagagttttctccgattaccgccacgccgcttcgagcctgaa
tattatgagcaagtaaaagagccgattgatgttaccacaatccaacataaactgaaaatt
cccgaatatttgacgtatgatcagtttaatgatgatttcatgatgttcattaaaaacaac
ctcacttactacaaagacgaatctgaagaacacaaggatatgatgaaaattcaagaactt
ttcgaggctgctaccgctaaggtgaaatctggagaatatctagatgacgcagaggacgaa
gagggagacgaagatgtggaagagacagttcaggaagaggaagaacctgaagagagtgga
acatcatctcgtgattcgacacctatggacctggatcacttcatgctttgtgatcttttg
ggagcggttcttgaagcgactgataacaccggaaggcttctttgcccaccattccgagtt
cttcaaagtcgagaagatttcccattgtactatgagaaaatagctaaaccaattgatctc
aaaacgattgctcaaaacggagtgaacaagaagtattccacaatgaaagaactcaaagat
gatctattcctgctcttcaaaaatgcacagcagtttagtggaaacggtagtgatattttc
aaagatgctgaacaattgaaaactgttgtgaaagaaaagattgctcgattggaagagaag
ggagttcatccaatgagaagagccaaagccacacgactcgttgatgctttgttaaccgct
gttgcagttaatgaaaacttctcagaagattcagaagaggacgaagaaactgaaacaaat
tcggagcctatgtggaagttgtattggacaatcagaaatgctgttcacgagaaagatcga
aatgttacgctggctgacaactttttggaacttccaagcaaagaatcttaccccgactac
tatgatgagatcaaaaaccctgtgtcaattttcatgataaataaaagattgaaaaatggg
aaatatgatttgaaatctctcgtcgctgatctcatgcaaatgtattcaaatgctttcgac
tacaatcttgaatcatcagaagtctacatttctgcggaaaagctgaaggcactaacgata
tccacgtgcaagcaacttgttccttcattcgatgtttctcaatacgaacctgctccggca
caacttacaccagtgaaaccaaaagcgacaccacacagagctcgaattaagattgagatg
ccggacacagactcggaagatagtaggactccacctcctactcataaaaggaaatctccg
aaaaaacctcgtgaaaatggaagtgttcctactccaacttttaaaggcagaaaatcgacg
atccctgtcgatccaaatgctgcttatatgaagcaaaaagcaatgatgcaagggctttgg
aacgttatccattcctacagagtcgcttcgaatccgggacattggccagcgggagcattc
atacaattgccatctgccaaacaatatccagaatactatcaaattattcaaaatccgatt
gatatgaaaacgattcggatgagaatagatggacatcagtatccacaggttgatgcaatg
atcaacgattgtcgagtgatgttttcgaatgctagagatttcaatgaaccccgttcaatg
atacacatggatgctattcaactagagaaagcagttttgcgagcttatgaaggaatgaga
aacacgtcactgggctcttcaataccgtcaactcctcattcgtcatcgtcaaatcttatg
aaagcaatgaaactaaaaactccgaaatccgaggtccgtggtcgcggtaaaaagaacttt
agtggatctgatgatgaggaatcagctcgaattaacatacaacaacatcaaagaagcatg
gaggatgctataatgcagcttccaatcgaagagcaaaaaatgtggagattgttcaaatct
atgaaagatgttcgtgaggaaggaaccaaccgtccattggctgtaaacttcatgcgtctt
ccatcaaaggaggaatttcctgcatattatgacgtcattaaaaagccgatggatatgatg
aggatcaagcataagctggagaatcgtcagtatgtaacactgcttgatgtggtttctgat
ttcatgctaatgctttctaatgcctgcaaattcaatgagactgattctgacatctacaag
gaagcagtttctcttcagaaggcacttttggaaatgaagcgagagcttgataccggagat
gatgcaccaagagttcaggttgaattgagaaccatatttacttcaatatttgcctcgctg
ttcagtaagaaagatgaagaaggaaaatgttattcggatcatttaactgaatttacggaa
gttctcaaagcgaatggagtaccttcatctgaatggccattcactcttgatcaaattaag
atgaatatagataaatgccgttacagacgactcgataagcttcaaaaggactttttcgat
ctgttcgaaagagcaagagaactctcaaaagcaggctcttcaatgtacgaagcagcatgt
acacttcaaaaatcatttattgttgaacgtgatacacgatgcaaagatttgatacactca
aatgcgtactgtgtaattgaaaaagatattgatgaagctattgaaaaggaaagaagcttg
aaggcaaaagaagaacatgatgaggagggaggaaacaaaccggcgatggtgaaaagacat
gaaagcgaagtcgaaatggaagatattgaaatcgatggaacgaaatatgtggcaccatgt
tacgcatacgtttcccgatctgacgagaagaaaactcctcttcacattttccgaattgaa
cgaacttttaaagacgagaatggggaaaaagctcttcaaggacattgggtttaccgtcct
gaagaaactcttcatttggcaagccgaaagttcatgaaacaagaagtttttcttacgcct
ttccgagatacagtacttgctgaacgtctacgaggacgatgtgtcgtcatttcactttcc
acgtacacttcaaaagtaatcaccgagtacagtgaagaagatgtatatctctgtgagtac
aagtatcatggaaaaccaaaatactttgctaagctgagaacctggccattcactgctgaa
gacgaggaattggagtatacaaagagaacaaaactaatgactcctaaacggaatttgaca
gcagttgattctgatggaaacgaaggaaaagacgatgtaattgttgatggagaagaagaa
gaagatgaagaagatcgtgctcgtcttgaagtatcattggatatggaaagatttgagttg
gaagcgtcaaaagatgaagaatctggaaaaacatacttccaacaaatccgttctgaaact
ggaaagtttttctggctcggacaatgtgttctggtgtttaacaatatgaagccgttgtgt
gatgtgatgaagattaataagatttggagagaaaaagacggttctgagtggttttccggc
tgctggtttgctcgtccatctgaaacaattcacgacgagggacgacttttcttcaagaat
gaggttattgcggtgtatcgaaacgacgaaactcgtaaattgtgcgagattcagagagtt
tgtgacgttatgcctgctaagctgtatataaaacagcgacagactgaagtatcggaatgt
gatgtttttgtttgtgaaacaatggtcaacggatcagcagatacacctgacgattgttct
ttgtttggttttcagagtattgtcgatgagttcagtgatgctcaaacaatgaatctcgat
tatggaaaggcaatgcgtaagatgaaggctcacaaacttcacgtttcaatcccgaatgaa
gaagtgctgttttacaaacaaccaataaaaatggacaaagaactctcaccactattgaaa
ggcgaaggcgttatgccactggatcatctggacgaaatgatggacgacgatacggatgga
agtgaatcggtgtcaagcagtattcatccgaagatcctgaaagaaggatcacccccagct
acagttcaatcgcagacttcttcagtttcaacacctccacaacatcccagtatatcagca
gaaatgcctattatgacaccaaaagcagttaagagcaagagtggatacattttgttctct
gctgaagttcgtaagaggataatgcatgaaaatccagacgcaggattcggtgaagtttcc
aagatagttggtattgagtggaaaaaattgtcggaagaacaaaagaagcattacgagatg
cgtgcggaagtcgtcgctgttgagaaagccaaacaggatgccattaaagcatcgcaagcg
atgacccttttgcccggacaagtgaggatatatcagtgtaaatgggctgcttgtgattca
caatatgataccgaatcggcccttctggagcatgttatccaacatcatactagtcaaatt
attatggacagtgaccagcaattcgtatgtatgtggatgacgtgtctacgtaatcgaaaa
gacggaaaaccattcccatcgcttcctcgacttcaccgtcacattaaagaaaaacatatg
cctacggcggcgaaaaacatttactccaaccagctaggcaagaatttttttaagtcgata
ccaaatcaaggagacactcctggatgccgtatagtatctgcgccttacggacaattacca
actgcaccatcaaatggtggaattccccctcaacaacaacatcaacaacagcagcatcat
ggaaatggaatgaacggaaatatgcaacaaggcgctccacaagttataaacaggcatcct
gttagccaacaaatgcatcatcagcatccacagcatatgcagcaacatcacgatcatcat
ccacatcagcagcattatcagcaaggtggccaacctcatccacagatgcaaatgggacca
ccacaaaacggaatgttccaacaaggatcttcttcatctcaacaatatcatcaggcacca
cctcaacaaatgattcaacaacaacatcaacaacctggtccacctccacaacagcaacaa
ccacaaatgcaacctatcgtggttacagatgttggacgaactgtagttcgagcagttgta
cctgcatttgttgcaccaccgaatcaaattcattcgagaagagttctacattcggaagca
tatctcaagtatatcgaatcacttgcccagaatcgacagaagtcggtaagccgatgggaa
cgaactctaggagcaactgccaggaatacccaaccagctggaaatgcccgcgctccatct
cattggataaggagaattgaaaacggacgacctgtagctcgcgaagaggatgttacaaaa
gctttgtggaaacttcgcgatgaattgttgaagagtacgtgtagtcttgtaatggaccga
ccaactcaatga
DBGET
integrated database retrieval system