Caenorhabditis elegans (nematode): CELE_C29E6.2
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Entry
CELE_C29E6.2 CDS
T00019
Symbol
trpa-1
Name
(RefSeq) Transient receptor potential cation channel subfamily A member 1 homolog
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
178118
NCBI-ProteinID:
NP_502249
WormBase:
WBGene00007801
Ensembl:
WBGene00007801
UniProt:
Q18297
LinkDB
All DBs
Position
IV:11864526..11875733
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AA seq
1211 aa
AA seq
DB search
MSKKSLGLDVRLELEGLISNDDTIRSEKDGRQASIFRVAELDARTEADNLRSIIHQSARE
GNVNALQEALLKAPLAVNAQDGDFMTPLHYAARYGNYDAVKLLLSKNALPNTKNREGDTP
LHIASKYIYGYSDICSIIDEDQADSARKYNTATKKIINALVSENAEIDPVNKYQLTPLHY
AAMKSNFSALHALIKLKADVDAEDDNKMTPLLLACVHGSQEIIQELIKANSNVTKRDQRL
NTVFHIVALRGEPEYLEMMMDHDPVEAIKALNLFNNEKKTPLRMAVEGNHPETLKKILQM
EKKNSCKWMDREKELIHFAAEKGFLEVLKALVEAGGNKNELNEVKAVPLHVAAQMNQLEV
VSYLIEEEKDNIDVVDEQGLTPLMMAVTHDSKKCVEYLIAKKANLTITDKDERTPVFIGA
KFNALSSVEYILDHLRKKNKETERSALKSPTRNTLRIVSEDVRRTMVNMVDRDQNTPMHI
VASNGYLEMMQLLQKHGASITQVNEDEETALHRAAIGGQTGAVRQLLEWDIRLLLMKDEM
GNSALHLAARSGHDATTKVLLDNGADKEAKNSYQKTPLQVAVDSGKLETCQRLVAKGAQI
ESSSDTKTVLHTAAFYGNESIVRYFIAEGVTIDRRDEEGKTAFDIACENDHKDVARAFLE
TDQWKNLMIPCDVIPLDKHRNPVNMKRRTPFRTLLTKFPELASFVMDNCIEKSKEETDST
QSVAYNFEFLDDTYMMRCVSDDGTGEQLIGCKSAYDEDFKLEKDAQSYASNYDRVYKYHP
LKLMADAEKLHLLNHPLSKALLKYKWNRLGRPMYYFALFMYLVFIVSLTQYVRHTKAPYN
VWNEESYYDSEYFDENETCPQINTTKPDVVWKIIIQTLAVCQILVECFQLFQRKFAYLVN
WENWIDCFIYSTALITVYDFSECSATSGVRQNWQWILAALCIFFGWINLLFMIRKMPRFG
IFVVMFVDIVKTFFRFFPVFVLFIIAFSSSFYVILQNRPEFSTIFMSPLKTTVMMIGEFE
FTGIFHGDETTHAEKMFGPAHTAVACALFFFFCIIMTILLMNLLVGLAVDDIKGVQEKAE
LKRLAMQVDLVLQIEASLHFFIQRTKKYATCRYATFPYGKLHKTGFAGWWSNFRRRFGLS
VSTDPEIDEMYEREAEFTSEMTQKLQNQAAKLKNIQENIDVMYEKQVRLEAIIAKLATGL
NINIELEEKDN
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaatcattagggcttgatgttcggctggaattggaaggattgatttcaaat
gatgatacaatcagatctgagaaagatggtcgtcaagcttcaatctttcgagtcgctgaa
ctagatgctcgcactgaagcagacaatcttcgttcaataatccatcaaagtgctcgagaa
ggaaatgtaaacgctcttcaagaagctctgctgaaagctccattggcagtgaacgcccaa
gatggtgattttatgacaccgcttcactatgcagcgagatacggaaactatgatgcagtt
aaactattactttctaaaaatgctctacctaatacaaaaaatcgagaaggcgacactccg
ttgcatattgcttccaagtatatctatggatacagtgatatttgctcaattatagatgag
gatcaagctgattccgcgagaaagtacaatactgcaaccaagaagatcataaatgcctta
gtttctgaaaatgctgaaatcgatcctgtgaataagtaccaattgactcctcttcactat
gcagccatgaaatccaacttttctgctctacacgctctcataaaactgaaagcagatgtg
gatgcggaagatgataacaaaatgacacctcttctattagcctgtgttcatggaagccaa
gaaataattcaagagcttattaaagcaaatagtaatgttacgaaaagagatcaacgactc
aacacagtatttcatattgttgcattgcggggtgagccggaatacttagagatgatgatg
gatcatgatccagttgaagcaatcaaggcattaaatttatttaataatgaaaagaagaca
cctttgagaatggctgtagaaggaaatcatccggaaactttgaaaaagattctgcagatg
gaaaagaaaaattcatgtaaatggatggatagggagaaggaattgatccattttgccgct
gaaaagggatttttagaagttttaaaagcattagtggaagctggaggaaacaagaatgaa
ctgaatgaagttaaagcagtgccacttcacgttgctgctcaaatgaatcaattggaagtt
gtaagctatttaatagaagaggaaaaggataatattgatgtagtcgatgaacaaggcttg
actcccttgatgatggcagtcactcatgatagtaaaaagtgtgttgagtacctgattgca
aaaaaagcaaacttgacaatcacggataaagatgaacgtaccccagtattcattggagcc
aagttcaatgctctttcttctgttgaatacattttggaccaccttagaaaaaaaaataaa
gagactgaaagaagtgctttaaagtcacctactcgaaatacacttcggattgtgtctgaa
gacgtgaggaggactatggtcaatatggtagatcgagatcaaaacactccaatgcatatt
gttgcttcaaatggatatttggaaatgatgcagttgctccaaaaacacggagcatcaatt
actcaagtgaacgaagatgaggagactgcattgcacagagctgcaattgggggtcaaact
ggagcagtaagacaactacttgaatgggatattcgacttttgttgatgaaagatgaaatg
ggaaatagtgcattgcatttggcagccagaagtggacacgatgccacaacaaaagtttta
ttggacaacggtgctgataaggaagcaaagaattcgtaccaaaaaactccgttacaagta
gccgtggattctggaaaattggaaacctgtcagagattagtggcaaagggagcacagatt
gagagctctagtgatacaaaaacagtattgcatacagctgcattctatggtaatgaatct
atcgttagatactttatcgctgagggtgtcacaattgatagaagagatgaagaaggaaaa
actgcatttgatatagcatgtgagaatgatcataaggatgtggcacgagcatttctagaa
acggatcaatggaaaaacttgatgattccatgtgatgtgattccattggataagcacaga
aatcctgtaaatatgaaaaggagaacacccttcagaactcttctgacaaagtttccagaa
ctagcttcgtttgttatggacaactgtatagaaaaaagcaaagaagaaaccgattcaact
caaagtgttgcatacaattttgaatttctcgatgatacttacatgatgagatgtgtgagt
gatgatggaacaggagaacaattaattggatgcaaatctgcatatgatgaagatttcaaa
ctggaaaaggatgcacaatcctatgcttccaattacgaccgcgtctataaataccatcca
ttgaagctaatggcagacgctgaaaaactgcatcttctcaaccatccactatcaaaagcc
cttctcaaatacaaatggaatcggctggggagaccaatgtattattttgctcttttcatg
tatcttgtttttattgtcagtttgactcaatatgtaagacatacaaaggctccatacaat
gtttggaatgaggaatcgtattatgacagtgaatacttcgatgaaaacgagacgtgccct
cagattaacaccacaaaacctgacgtcgtatggaaaatcatcattcaaactttagccgtc
tgtcaaattctagtggaatgtttccaattattccaacgaaaatttgcatatctggtaaac
tgggagaactggattgattgttttatatactcaacagcccttattactgtatacgacttc
tccgaatgctcagcaacatcaggagttcgtcagaactggcaatggattctagcagcttta
tgcatatttttcggatggatcaacttattgttcatgatcagaaaaatgccaagatttgga
atattcgtggtgatgtttgtggatattgtgaagacattcttccgcttcttcccagttttt
gtgctattcataattgcgttctcttcatccttctacgtgatccttcaaaatagaccggaa
ttttccacgatcttcatgtctcctctcaaaactacagtaatgatgattggagaatttgag
ttcactggaatatttcacggagatgaaactactcatgctgagaaaatgtttggcccagca
cacacagcagtcgcatgtgcacttttcttctttttctgcataataatgacaattctcctg
atgaatctacttgttggtttggcagttgatgatattaaaggtgtacaagaaaaagctgaa
ctgaaacgtctcgcaatgcaagttgatcttgttctgcaaattgaggcctctcttcacttt
ttcattcaacgaaccaaaaaatatgcgacttgccgttatgcaacttttccatacggaaaa
cttcataagactggttttgccggatggtggtccaatttcagaagaagattcgggttgagt
gtcagcactgatccagaaattgacgagatgtatgaacgggaagcggagttcacttctgaa
atgactcaaaaacttcaaaaccaagcagctaaactcaaaaatattcaagaaaatattgat
gtgatgtacgagaagcaagtacgacttgaagcaatcattgcaaagctcgcgacagggctc
aacataaatattgaacttgaggagaaagataactga
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integrated database retrieval system
