Caenorhabditis elegans (nematode): CELE_C30H6.6
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Entry
CELE_C30H6.6 CDS
T00019
Symbol
haf-1
Name
(RefSeq) HAlF transporter (PGP related)
KO
K19762
ATP-binding cassette, subfamily B, HAIF transporter
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04212
Longevity regulating pathway - worm
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09150 Organismal Systems
09149 Aging
04212 Longevity regulating pathway - worm
CELE_C30H6.6 (haf-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_C30H6.6 (haf-1)
Transporters [BR:
cel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
CELE_C30H6.6 (haf-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND1
AAA_22
AAA_16
RsgA_GTPase
AAA_29
AAA_23
P-loop_TraG
DUF3987
AAA_21
AAA_15
Zeta_toxin
AAA_25
Motif
Other DBs
NCBI-GeneID:
178522
NCBI-ProteinID:
NP_503098
WormBase:
WBGene00001811
Ensembl:
WBGene00001811
UniProt:
O45278
LinkDB
All DBs
Position
IV:17376427..17379310
Genome browser
AA seq
677 aa
AA seq
DB search
MHCLCVLRSTLCCQMPTSTYRMLLQTKAVPVQIIKRDLTAKVKNQKLNQNIRRVDRRNAA
YLLRHTTWKDLVELYEIAKPFRKWIFLGTSFMVVSSGIFLIIPRILGKLIDQFDSNTGVQ
KAEEVFTMKIAKYFKEQPMSLVGLLAIGALATAAKVYCLQIAGVNIVGSLRKMVYSSIIR
QDMTFFDKNMVGEIGSRHAADTVIVGYSVSSSLRAGVRAVLVGVGSIGMMLMTSLELSTV
SFLTAPIVMGIFKMFGRVQQQCTWQLQEVAADVNQTAIERMANMKTIRMLSAEQQSIDEY
CKKGELVLDISKTEALAKGSLIGSFQFTGYSAFSSILFYGSHLINTGHITYGELSSFCLY
AVLAAASLSNISGFYNEVMKGLGASSRLLELKNAQPIMNLNSGIKKTDITTSIQFENVSF
AYAGRKKTLENISFDIPRGKITAVIGPSGSGKSSIANLMLRLYDPADGRVTVDGVDLRDL
NATTWRHAIGTVGQEPVLFTCSIRENILMGTEHPEKVSQYELEEAAQLANALDFIQGFEN
GFETMVGEHGCKLSGGQKQRIAIARALISKPKIMILDEATSALDATSDYLIRMTLDNLLK
NHNLTVLVIAHRLATMQQADQVVYVNRGRIEGQGTFDEMMKIQNSIVEQEARRRGIPMNE
QMSRVNTPVARGFSLKF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtctatgtgttcttcggagtacgttatgctgtcaaatgcccacatctacctat
cgaatgttacttcaaacgaaagctgttccagttcaaataatcaaaagagatttgacagct
aaagttaaaaatcagaagttaaatcagaatattagaagagttgacagacgtaatgctgca
tatcttttgagacatactacgtggaaagatttggtggaattatatgaaattgcaaaacca
tttcggaaatggatatttttgggcacaagtttcatggtagtgtcaagtggaatttttctg
attattcctcgaattttgggaaagctcattgatcaatttgatagtaatacgggagttcag
aaagccgaggaggtgttcacaatgaagattgcaaaatatttcaaggagcagcccatgtcg
cttgttggattgttagcaatcggtgcattggctacagctgcgaaagtttactgcttgcaa
attgcaggagtgaacatagttggaagtttgcggaaaatggtgtacagttctattatcaga
caggatatgacatttttcgacaaaaacatggttggcgaaatcgggtctcgccacgctgca
gatactgtaatcgtcggatattcggtctcatcgtcccttcgagcaggagttcgagctgtt
ctcgtcggtgttggctctattggaatgatgcttatgacgtcattggagttgtctacagtc
tcctttttgactgctccaattgtgatggggatatttaaaatgtttgggagagtacagcaa
caatgcacttggcaattgcaagaggtggcggcagatgttaatcagactgcgatcgagcga
atggctaatatgaaaacgattcgaatgctcagtgcggaacaacaatcaatagatgaatac
tgtaagaaaggggaactggttttagatatttcaaaaactgaagctttggcaaagggaagt
ctgattggatctttccaattcacagggtactctgcgttctcttcgatcttattttatgga
agtcaccttatcaatacgggacatatcacatatggagagctctcatcgttctgtctctac
gctgttctcgctgctgcaagtctctcaaatatctctggattttacaatgaagttatgaaa
ggcctcggagcttcatctaggcttctcgagctgaaaaatgcacaacctattatgaatctg
aactctggaattaagaagactgacattaccacatcaattcaatttgagaacgtttcattt
gcatatgctggacgcaagaagactttggagaatatatcatttgacattccacgtggcaaa
attactgccgtaattggaccatctggtagtggcaagtcgtcaattgcaaacttaatgctg
agactttacgatccggcagatggaagggttactgtagatggagttgatctacgcgacctg
aatgctacaacatggagacatgcaattggaaccgttggtcaggagcctgttctgttcact
tgctccattcgagaaaatatattgatgggaacagagcatccggagaaagttagccagtac
gagctggaggaagccgcacagctggctaacgcattggattttattcaaggatttgagaat
ggttttgagacgatggtcggagagcacggatgcaagttatctggaggccaaaaacaacga
atcgcgatcgcacgtgcactgatttcaaagccaaaaatcatgattcttgatgaagcaact
agcgctcttgatgcaacctctgactatttgattcgaatgactttggataatttgctgaaa
aatcataatttgacagtattggttattgcacatagactcgccacaatgcaacaagctgac
caagtggtttacgtgaatagaggtcgaatcgaaggccaaggaacatttgatgaaatgatg
aaaattcagaattcgattgttgagcaagaagcaaggcgtcgaggcatcccgatgaatgag
cagatgagcagagtaaatactcctgtggctcgcggattttcattaaaattctag
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