KEGG   Caenorhabditis elegans (nematode): CELE_C54A12.1
Entry
CELE_C54A12.1     CDS       T00019                                 
Symbol
ptr-6
Name
(RefSeq) SSD domain-containing protein
Organism
cel  Caenorhabditis elegans (nematode)
SSDB
Motif
Pfam: Patched Sterol-sensing CDC45 DTX3L_a-b
Other DBs
NCBI-GeneID: 173898
NCBI-ProteinID: NP_494986
WormBase: WBGene00004221
Ensembl: WBGene00004221
UniProt: Q09938
LinkDB
Position
II:complement(5242442..5246837)
AA seq 982 aa
MRCRIPTLDKKLEKVFAWYTKHLLVDYYYVFLIAPVILTAICSCGFYWIKELTLLDARKL
YTPVSAPSWKEEQVFSELWPVKSYEFLPERTFQWNRYLYLVVHGRPYENGTYPNILEGSY
LNDIAKIEEELVTNVSFPREAALEDNPALMRKRHLNETEIEENRNITITFKDVCMNWYGD
CYREKNVIELLKRRHELNKRGISVTFPQVNQEGTPIYIAFVIGGVDTYPNDTIKYARAMR
LWYFLKFDDEEQEQLAKFWEDTAEKFVRETYADHPTIQCHIKHSRIVDQGLTRNANRLKP
YFNVTIAVLVLFTAFYSVKWYFRMDHSWPLHIDWLRSKPMLALGGVLSSVLAILSGIGLL
LWFGMFFAEITLIAPFLVLSIGVDDMFIAVAAWHNTEMKYPGRSPKVMKKRMIEAMSESA
VAIFITSFTDVLSFGAGTITDIIAVQGFCAMTAACMFFTFLYQITFFAALMVISAKAQMS
GRNSCMPCITAGDIYTIEDGSLQPNLKKKKSKSRKDAKAEKEKKDEAKNDKNMEIEENAE
NAEKSSYDSSPDPSQIHIPVKSRGAMGHFFRDYYVPWLLNWKTKLFMFVTFIIYLGISVY
GICVMEQGLDYDKLLLHSDPLVEALKREIELFHGGDQIEIAIQNCPNITIAESRDRIELV
AQEFENISYSLGGKGTSFWMREYKKYSNLTGSYLNDNRESWIVGVYEWSQLFAFYKLWSQ
DFVWANESDYDTLELKSYRFRIGVHRLSTPTDLVLITEELRGVADRHPDLNIVTYQQSRA
IADQLNVILSSTITNDTLAMFCMFCVALIFIPNPICALFITFAMVTIDIGVIGFLSLWSV
KLDPISMITIIMSIGFSIEFSAHITHGFVSNDSNLSAFDRCVDAMEKLAWPVVHGSLSTI
LGVFVLAFIDSYMVLVFFKTISLVLIIGAWHALMLLPILLSMCIPVIERLSDASKKASDR
RRKLKENKNSVYAINLPVNVSS
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgcgatgccggattccaactcttgacaaaaagctggaaaaagttttcgcatggtatact
aaacaccttctagttgattattattatgtctttctaatagctcctgtcatattaactgcc
atatgtagttgtggattttattggattaaagaattgacacttcttgatgcaaggaagctg
tacacacctgtttcagcaccaagttggaaagaagaacaggtttttagtgagctgtggcca
gtgaaatcctacgagtttttacctgaacgtacatttcaatggaatcgatatctttatcta
gttgttcacggacggccatatgagaatggaacttaccccaatattttagaaggttcttat
cttaacgatattgcaaaaattgaagaggaattagtgacaaatgtcagttttccacgggaa
gctgcacttgaagataatccagcactgatgaggaagagacatttgaatgaaactgaaatc
gaagagaacaggaatattacaattacgtttaaggatgtgtgcatgaactggtatggggat
tgttacagagagaaaaatgtcatcgagttgttgaaacggaggcacgaactcaacaaaaga
ggaatctcagtgacattcccacaagttaaccaagaaggaactccaatatatattgcattt
gtgattggaggtgtagatacatatccgaatgatactatcaaatacgcaagagccatgcga
ctttggtatttcttaaaatttgacgacgaagagcaagagcagttggctaaattttgggaa
gacacagctgaaaaattcgttcgtgaaacatacgcagaccatccaacaattcaatgtcat
attaaacattcgagaattgtggatcagggtctgaccaggaatgcaaatcgattgaaacca
tatttcaatgtaacaattgccgtgttagtactgttcaccgcattttattctgtcaaatgg
tacttccgcatggatcattcatggccacttcatattgattggcttcgttcaaaacctatg
cttgcacttggtggagttttgtcttctgttctggctattctgagtggaattggattgctc
ttgtggttcggaatgttttttgcagaaatcacactcatcgctccgttcttggttttatct
atcggtgtcgatgacatgttcattgcggttgccgcgtggcacaacactgaaatgaaatat
ccgggaagaagcccaaaagtgatgaaaaaaagaatgattgaagcaatgtccgagtcagca
gttgcaatcttcatcacatcattcactgacgttctttcttttggagctggaactatcact
gatatcattgctgtccagggtttctgtgcaatgacagctgcctgcatgttcttcacattc
ctttatcaaatcaccttctttgctgctttaatggttatttctgcaaaagctcaaatgtct
ggcagaaactcttgtatgccgtgtattactgccggcgatatctacacaattgaagatggt
tcattgcaacctaatttgaagaagaagaaatcaaaaagcagaaaagatgcaaaagctgaa
aaagaaaagaaagatgaagctaaaaatgataaaaatatggaaattgaagaaaacgccgag
aacgccgaaaagtcttcatatgactcatcgccagatccatcccaaattcatatcccagtc
aagagtagaggtgcgatgggacatttcttcagagattactatgttccctggcttctcaac
tggaaaacgaaactttttatgttcgttacatttattatataccttggaatatctgtttat
ggaatttgtgtaatggaacaaggtctagattatgacaaactgctgctccattctgaccca
ttggttgaagcattgaaacgagaaattgaactattccatggtggagatcaaatcgaaatt
gctattcaaaactgtccaaatattacaattgccgagagccgagatagaattgaacttgtt
gctcaagagtttgaaaatatttcctactctcttggcggcaaaggaacatcattttggatg
agagaatacaaaaagtacagtaacctcactggatcttatttgaacgataatagagaaagt
tggatcgttggagtttatgaatggagccagctctttgcgttttataaactttggtcacaa
gattttgtgtgggcgaacgaatccgattatgatactttggagttgaagtcatatcgattc
cggattggagttcatcgtctttcgacgcctacagatttggttttgattacagaagagctc
cgtggtgtggctgaccgtcatccagatctgaatattgtaacatatcaacagagtcgagca
atcgccgatcagttgaatgtgatcttaagttcaacaatcacaaatgacacgctggcaatg
ttttgtatgttctgtgtagctctcatcttcattccaaatccaatttgtgcacttttcatt
acatttgcgatggttactattgatattggtgtaattggatttttatcattatggagtgtt
aagctggatccgatttcaatgattacaattattatgtccattggattttcaattgaattt
tccgctcatattactcatggatttgttagtaatgatagtaatctgtcggcttttgatcga
tgcgtagatgctatggaaaagttggcttggccagtggtccatggaagtttgtctacaatt
ctcggagtttttgttctagcatttattgattcctacatggttcttgtcttctttaaaact
atctctcttgttcttattattggtgcctggcatgctctaatgcttctcccgatacttctc
tcaatgtgtattccagttatcgaacgactttcagatgcatccaagaaagcatccgatcgt
cggagaaagctgaaggaaaataaaaatagtgtttatgcaattaatttgccggtaaatgta
tcctcgtga

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