Caenorhabditis elegans (nematode): CELE_F10B5.5
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Entry
CELE_F10B5.5 CDS
T00019
Symbol
pch-2
Name
(RefSeq) Putative pachytene checkpoint protein 2
KO
K22399
pachytene checkpoint protein 2
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F10B5.5 (pch-2)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
CELE_F10B5.5 (pch-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_18
AAA_22
AAA_16
nSTAND3
AAA_24
AAA_25
AAA_28
RNA_helicase
AAA_14
TsaE
Viral_helicase1
DnaB_C
AAA_19
AAA_7
AAA_5
Rad17
ATPase_2
AAA_17
AAA_11
AAA_2
DUF815
nSTAND1
KTI12
TIP49
RuvB_N
AAA_30
AAA_33
NTPase_1
bpMoxR
KAP_NTPase
ResIII
Mg_chelatase
Cytidylate_kin
SRPRB
IstB_IS21
NACHT
SPC25
ATPase
SLFN-g3_helicase
PduV-EutP
ATP_bind_1
Sigma54_activat
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
174313
NCBI-ProteinID:
NP_495711
WormBase:
WBGene00008641
Ensembl:
WBGene00008641
UniProt:
Q09535
Structure
PDB
LinkDB
All DBs
Position
II:8158349..8159925
Genome browser
AA seq
424 aa
AA seq
DB search
MHEPMKTLKNIHAEIRICQKFPKSTVQKRFSEFEELIKAASKNARNWKPISSVELFQGDS
SLNELFEKLVIGTCELRDGELFENVNDLTINPSNIHVYKLHKDGPLSQNIGDDDGDESII
GSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVAALARLSEKHVNTKIINVNRLILLTGP
PGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELA
EDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVLILCTSN
LESTLDKALVDRADIVKNVGQPSDFARYSMLKSSIMELARIGVVIDNEVHTDYWPQDICD
TKAPRNEFTEILFKIAQEARGLSGRAISMLPTLVYSKSPEETITLPNCMNLFLEAVKERL
SRNN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagccaatgaagactttgaaaaacatccatgccgaaattcgaatttgtcaaaag
tttcctaaatcaacagttcaaaagaggttttccgaattcgaagaactaattaaagcagcc
tcgaaaaacgcgagaaactggaagccaatttcgtctgtcgaactgtttcaaggggattcg
tcactcaatgaattgttcgaaaaactagttattggaacttgtgaactcagagatggggaa
ctttttgaaaacgtcaatgatttaacaatcaatccttcgaatattcatgtctacaagctt
cataaggacggaccactatcgcaaaatatcggtgacgatgatggagatgaaagcatcatt
ggatctcaattatggcagctcccatgtgttgagttcgattccatttgggagaatctaatt
tatgattcaaatcttaaaaatgaagttatgtcttacgtagcagctttggcaagactttcg
gagaaacacgtaaacacaaaaatcatcaatgtgaatcgactaattcttttaactggacca
ccaggaacagggaaaacttctttatgcaaaggacttgcccagcatttatcaattcgaatg
aacgataaatattcaaaatctgtaatgttggaaatcaatagtcatagcctgttttcaaaa
tggttctcagaaagtggaaaactcgttcaaaaaatgttcgatcaaattgatgaactagct
gaagatgagaagtgcatggtttttgttcttatcgacgaggttgaatcgctcggaatgtgt
cgtgaatcctcatcatctcgttctgaaccatcggacgccattcgagcagtcaacgccctt
ctcactcaaattgatagaatcaggagacgtgataacgtacttattctgtgtacgtcgaac
ctggaatcaactctggataaagctctcgttgatcgagccgacattgtaaaaaatgtcggg
cagccttcggactttgcacgatattctatgctgaaatcatcaattatggaattggcccgg
attggtgttgttattgataatgaagttcacactgattattggccacaagatatttgtgat
acgaaagcaccaagaaatgagtttaccgagattctttttaaaatcgcccaagaagcgcgt
ggactctctggacgagcaatatccatgcttcctacactggtttattcaaaaagtccggaa
gaaactatcacactgccgaattgcatgaatctctttctcgaggctgtaaaagagcgtctg
agtagaaataattaa
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