Caenorhabditis elegans (nematode): CELE_F14F3.1
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Entry
CELE_F14F3.1 CDS
T00019
Symbol
vab-3
Name
(RefSeq) Paired box protein 6 homolog
KO
K08031
paired box protein 6
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_F14F3.1 (vab-3)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
CELE_F14F3.1 (vab-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HTH_28
Motif
Other DBs
NCBI-GeneID:
181251
NCBI-ProteinID:
NP_001024570
WormBase:
WBGene00006870
Ensembl:
WBGene00006870
UniProt:
G5EDS1
LinkDB
All DBs
Position
X:<10499890..>10519579
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AA seq
455 aa
AA seq
DB search
MSDAGHTGVNQLGGVFVNGRPLPDATRQRIVDLAHKGCRPCDISRLLQVSNGCVSKILCR
YYESGTIRPRAIGGSKPRVATSDVVEKIEDYKRDQPSIFAWEIRDKLLADNICNNETIPS
VSSINRVLRNLAAKKEQVTMQTELYDRIRIVDNFPYNSSWYGQWPIPMNGAVGLNPFVPA
PLIEPKTEGEFEKDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTH
YPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTP
GSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGIAN
GFSMAPYPQVTDFQPHHMFQGRSPYDFPYPRMPTNGHGFQQSMSPATTAVGDIPTLSSGM
SLPVSAVLNSIDPSLTHSQMHELSDLTQEHYWRPQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgctggacacactggtgtgaatcaacttggaggcgtatttgttaatgggcgt
ccactcccggatgcaacacgtcaaagaatcgtggatttagcgcacaaaggatgccgtcct
tgtgatattagtcgtctattacaggtttccaacgggtgtgtctccaaaatcttgtgccgg
tactacgagtcaggcacaatccgaccacgagcaattggtggctcaaaaccaagggtggcc
acgagtgacgtcgtcgagaaaattgaagattacaaacgtgaccaacctagcatttttgca
tgggaaatcagagataaactgctagctgataatatctgcaacaacgaaacaataccaagc
gtatcttctataaatagggttctacggaatttggctgcaaaaaaggagcaagtcacaatg
caaacagagctttacgatagaattcgaatagttgataactttccttacaattccagttgg
tatggtcaatggccaataccgatgaatggagcagttggattaaacccattcgttcctgca
ccactcatcgaaccaaagactgaaggagagtttgagaaagatgaggaccaaaaacctcca
actgagccagaagatgacgcggcagccaggatgcgattgaaacggaagttgcaaagaaac
agaacctcgtttacgcaagtccagattgagagtcttgaaaaagaatttgaaaggactcat
tatccagatgtttttgcaagggagcgtcttgcgcagaaaattcaactaccagaagcaaga
atacaggtatggttctcgaatcggcgggcaaaatggaggagagaggaaaagatgagaaac
aagcgatcatccggcaccatggattcatcattatccaatggaacgccaacgccaacgccg
ggatcagtgactggaagtaacatgacaaatccgattggatctccggccagcacgccgaat
cgattcccttccaacaattcggcaaatctaccgacaacaaactttgtgcctcaaacgagt
cagatgtatgctgggctcagtcagccagcaatggatccatattcatttggaattgccaat
ggtttttcaatggctccatatccacaagtaacagatttccaaccacatcacatgttccaa
ggaagatcgccgtatgatttcccatatccaagaatgccgaccaatgggcatggtttccaa
caatcaatgagtccggcaacaacggcggtaggagacattccgacactttcttctggaatg
agcctaccggtttctgcagtgctcaattccattgacccgtctctgactcactcacaaatg
catgaactcagcgacctcacacaagaacattattggagacctcagtag
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