Caenorhabditis elegans (nematode): CELE_F44F4.4
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Entry
CELE_F44F4.4 CDS
T00019
Symbol
ptr-8
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
DUF4349
Motif
Other DBs
NCBI-GeneID:
174678
NCBI-ProteinID:
NP_496343
WormBase:
WBGene00004222
Ensembl:
WBGene00004222
UniProt:
Q20404
LinkDB
All DBs
Position
II:10889279..10893277
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AA seq
890 aa
AA seq
DB search
MGHKNETSRVTRIWNSLSYKIGSTVARYPVITIIFCLVLSAVMSIKLALTPKVSAIDGYA
SDDSMSRHEFKTFQQFLDSDGPGITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFK
LNVSGVEKNFNQFCRGFCQANEPVRQYYNGLQILGKNQTDGISKRIDLSYPTSNFFGRKF
SLIPNFFGISMSPEGQHLNSSNLIVLYFRAERYPDWSTKTVKQWELRVRDHFAKEYSSDL
IIVDVMSQTVVESEIVRAGLSLQPFLIVGFVIMSIFCTVTTMFSAVYLYSQKATFNKVAL
SIIACINPFMACGTAMGILFFCGVTFSPIMCITPFLVLAISVDDSFLMLHAWNRLESWRT
APLDKPMREHMMGEVLVETGPAISISAFTNMLAFTIGAITSPPEIRIFCFGNAAAIFMDM
FYQATFYTACMTLLGDTKNSEGVSEKTKRIQERMGNVVGRFLKWYVNAISNIFVSFGIVL
VWAVFIGFAVLGLTRLHVELRPSKFFLKDSPMLYMDRLRTNEVVPYYTPVHVIVNNPGDL
TNDSNVERLVELKEKLEHMPNAIGAPSTKFFLDDFVQYRSSFAEEIEMDIAEDDSESEKS
DIEQFLEWPEFSFWRGFLRFDNQTHPHNVTKFMFTTGFHGQDLKDWNKRGQLLKRWRGAV
EEFKDDFNTTVFTEDAFFLDMIDSIPTVTWQTTLATFIFVSLVCFLFISDILTVMIVSVA
TLVTSVGVFGYLSLLGVTLDPVIMSIAIMCIGFSVDIPAHVAFHFYAAKAKKHASSHSQP
SPHQVTSPDIVHSTSTTSSSDSSISTPNSFETNLNFALSSVGFPVIQAGVSTDFCALPLG
FMELYMAKMFALSLTLCVSLSLIHGLIVIPALLSVQHHIVHAVKRCFGRN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaaaaacgaaacgtcaagagtgacgaggatatggaattcgttgagttacaaa
attggctcaacagtagccagatacccagtcatcacaattatattttgcctagttttgtca
gcagttatgagtatcaaattggcattaacaccaaaagtgagcgcaatcgacggctacgca
tcggacgactcaatgtcccgacatgaattcaaaactttccaacaatttttagactcagat
gggcctggaatcaccacagctatacttatcagatcttccataacaaatggatcacttctc
gaagaacaacgattaaaagaagttgtgaaagtatcggattttatttctaccaactttaaa
ttaaatgtttccggagttgagaagaatttcaatcaattttgtagaggattctgtcaggct
aatgagccagttagacagtattataatggtctccaaattcttggcaaaaaccaaacggat
ggaatctcaaaacgaattgatctttcctatccaacctccaactttttcggcagaaaattc
agtctaatccctaatttctttggaatatcaatgtctcccgaaggacagcatttgaattcg
tcgaacttgattgttctctacttccgagcggaacgatacccagactggtcaacgaagaca
gttaagcaatgggaattacgtgtcagagatcactttgcaaaggaatattcaagtgatttg
atcattgttgatgtcatgtcacagactgtcgtggaaagtgaaatcgtccgcgcgggactc
tccctccaaccattcctcattgttggattcgtcatcatgtcaattttctgcacagtaaca
accatgttcagtgcagtttacctatattctcaaaaagcaacattcaacaaagtggctctt
tcgattatcgcctgtataaatccatttatggcatgcggaacagcaatgggaattctgttt
ttctgtggtgttactttcagtccaattatgtgtattacaccattcctggtgctcgccata
tcagttgacgatagtttcttgatgcttcacgcctggaatcgattggaatcatggaggact
gcaccattggataagccaatgagagagcatatgatgggagaggtcctcgtagaaactgga
ccagctatctcaatttctgcgttcacaaacatgttagccttcacaatcggagccatcaca
tcgccacctgaaattcgaattttctgttttggaaacgccgcggctatattcatggatatg
ttctatcaggcaacattttatacggcatgcatgacacttcttggtgatacaaaaaactct
gaaggcgtcagtgagaagacgaaaaggatccaagaaagaatgggaaatgttgttggaaga
ttcttgaaatggtatgtaaatgcaatttccaatattttcgtgtcatttggtatcgtcttg
gtttgggcggttttcattggattcgctgtactcggactgacaaggctccacgtggaactc
agaccgagcaagttcttcctaaaagactcaccgatgctctacatggatcggctcagaaca
aatgaagtggttccttattatacacctgttcatgttattgtgaataatccaggagatttg
acaaatgattcaaacgtggaaagattggttgagttgaaggagaaattggagcacatgcca
aatgcaattggagcaccgagtaccaagttctttttggatgattttgtgcaatatcgttca
tctttcgctgaagaaatcgaaatggacattgcagaagatgactcagaatctgaaaaaagc
gatatcgaacagttccttgaatggccagaattctcattttggaggggcttcttgagattt
gacaatcaaacacatcctcataacgtgacaaagttcatgttcaccaccggatttcatggt
caggatttgaaagactggaacaaaagaggacagttattgaagagatggagaggagcagtc
gaggaatttaaagatgacttcaacactaccgtattcacagaggatgcatttttcctcgat
atgatcgattccatcccaactgtgacgtggcaaactacgctggccacattcatcttcgtt
tcacttgtctgcttcttgttcatctcagatatcctgacggttatgatagtgtcagttgca
acattggttacttctgttggagtattcggttatctatcgttattgggtgtcacactggat
ccggttatcatgtcgattgcaattatgtgcattggattctcggttgacattccggctcat
gtcgcattccatttctatgcagcaaaagccaagaagcatgcttcatctcatagtcaacca
tctccccatcaagtaacatcacctgatattgtacattcaacatcaaccacctcctcatct
gattcatcaatttcaactccaaattctttcgaaacaaacctgaattttgctttatccagt
gtcggatttccagttattcaagccggagtttcaactgatttctgtgctcttccacttgga
tttatggaactttacatggcaaaaatgttcgcattatctctgactctctgcgtatcgtta
tctcttattcacggacttatagttattccagcacttttatcagttcaacatcacatagtt
cacgctgtgaagcgatgttttggaaggaattag
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