Caenorhabditis elegans (nematode): CELE_F54G8.4
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Entry
CELE_F54G8.4 CDS
T00019
Symbol
nhl-1
Name
(RefSeq) RING-type domain-containing protein
KO
K11997
tripartite motif-containing protein 2/3
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_F54G8.4 (nhl-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
CELE_F54G8.4 (nhl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
zf-C3HC4
zf-RING_UBOX
SGL
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
Phytase-like
rve_2
Lactonase
zf-RING_6
SF-assemblin
Motif
Other DBs
NCBI-GeneID:
176295
NCBI-ProteinID:
NP_001309582
WormBase:
WBGene00003597
UniProt:
A0A131MCD3
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Position
III:complement(9147395..9153909)
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AA seq
924 aa
AA seq
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MSSSPQNEAEAREKMRELMSRPPSSRPADFVNPLEKIEQLLTCPICLDRYKQPKLLPCQH
TFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPNYTLTGFLEIHLQATPESAAE
IEEYIHRYNLERCKICDEKADCEPCAHCDRKACKECRQTHMDMLKRDMSRLLNQVKRLAN
RITEASDNLSKGVDMMTMNCETTKAEIKEYFHRYQRDLKKKEDNFLMEVDTFQATETRNM
SNLRDVLEIESSNMSEAVSRLDAAIKGECSIEDSELVRMKNTFTEGLEYLRNFQPDADEL
FNRKLRFSAGDDAAKLPAAITTSGELCVLVPQFSGRYLPLEQSYLPRPFRLPLESDSYRV
KSDERASMRDREADRTSSRHSHRNPEPDESSIRYRRRQQLEDEAWNRLRNSSAAPSLLTT
SVTADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVSPASKPPLPPQSVERVE
RTEDASPAPLPQLPIRKPPLPRQQSSNDDSLNEKVETIRRAHQQRQDASRAASRAVSSEE
SEGEDFPVSTNRGRIRIVCRAASVNRDDGLMSMIPGTGTIINVPPPQHQLPASAPITNGT
SEQVAIPVTHFTDSSTTTDEEKEKLAVLRQRGRSASREAGEWRARGRPRAVFGRKGAKDG
ELNWPRGICALSGGLVATCDSSNHRVCVFDKDGKFVRQFGGYGAGAGQLDSAAGLASSKL
RVIVSDRYNHRISVFGLEGDHLFSFGGHGQGNAKFNNPWGVAVDDLGSIYVADKDNHRVQ
VFDKNGQFIAKFGSFGHLPGQLNSPLFIAVSRVTHHVYVSDSSNHRISVFDPHGVHLFSF
GEEGFHGGQFKFPRGIAIDSQENLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKGV
EDVCVTADGSIVVTDRENHRIQIF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctccacaaaatgaagcagaagctcgcgaaaagatgcgcgagctgatgtca
cgtccaccatcgagtcgaccagctgattttgtgaatcctctcgaaaagatcgagcagttg
ctgacgtgtccgatttgtctcgatcgctacaaacaacccaagcttctaccttgtcaacac
acattttgctatccatgcttggaaagttgtgcagacacgttacatcgcaatttgaaatgt
ccagaatgtcgagcagaacacaatattccatatgacggagtaaaggcgtttcagccaaac
tacacattaaccgggtttctcgagattcatctgcaggccacaccagaatcggctgcagaa
attgaagagtacattcacaggtacaatttggaacggtgcaagatttgtgatgagaaagca
gactgtgaaccatgtgcacattgtgatagaaaagcatgtaaagaatgtcgacagactcat
atggatatgcttaaaagagacatgtcgcgacttttgaatcaggttaaacggcttgccaat
cgaattacggaagcatcggataatttatcaaaaggagttgatatgatgacaatgaactgt
gagacaacaaaagcagaaattaaagaatatttccacagataccagagagatctgaaaaag
aaggaagacaactttctcatggaagttgatacatttcaagctactgagactcgtaatatg
agcaatcttcgtgatgttctggaaattgaaagttctaatatgagtgaagcagtttctaga
ctggatgctgcaatcaagggagaatgttcaattgaagattctgaacttgttcgaatgaaa
aacacgtttacggaagggcttgaatatcttaggaactttcagcccgacgccgacgaactt
tttaatcgaaaactccgattctcagctggagatgatgctgctaagcttccagcagcgatc
actacttctggtgaactttgtgttctagttcctcaattttcgggaagatacctccctctt
gaacaatcataccttccaagaccattccgtttaccattggaaagtgacagttatcgggtt
aaatctgacgaaagagcaagtatgagagatcgagaagctgataggacatcttcaaggcac
agtcatcgaaatcctgagcctgatgagtcctcgattcgttaccgtcgtcgtcagcagctg
gaagacgaagcttggaatcgtctccgtaattcatctgctgctccttctcttcttactaca
tcagtcactgcggactcttcatcacgaacatcgccgtgggctgctgatcgtgtcacccga
tcagttgaaccaaccaagtcacggccaacaagtctgattgttccgaatactgaaacacca
agaactgtatctccagctagtaaacctcctcttccaccacaatctgttgaacgggttgag
aggactgaagatgcatcacctgctccacttccacaacttccgatccgaaagccacctctg
ccacgtcaacagtccagtaacgatgattctttgaatgagaaagtggaaaccatccgtaga
gctcatcaacaacgtcaagatgcatctagagctgcatcaagagcagtttcaagtgaagaa
tcagagggagaggattttcccgtatccaccaaccgcggtagaatacgaatagtttgtcgc
gcggcatctgtaaaccgtgatgatggactgatgagtatgatcccaggaactggtacgatc
ataaatgttccgccacctcaacatcaacttccggcatccgctccgatcaccaatgggaca
tctgaacaagtcgcgattccagtcacacatttcacagactcttctacgacaaccgacgaa
gagaaagagaagcttgccgttttgcgacagcgtggccgcagcgcttctcgtgaagctggt
gaatggagggctcgtggtagaccacgtgcagtattcggacgaaaaggtgcgaaggatggc
gagttaaactggccacgtggaatttgtgcattgtccggaggtcttgtcgcaacttgtgat
tcgtctaatcatcgtgtctgtgttttcgataaagatggaaaatttgttcgtcagttcgga
ggctacggtgccggtgccggacaacttgattcagctgccgggctagcaagctcaaagctc
cgagttattgtatccgacaggtacaatcatcgaatttccgtttttggattggaaggagat
catttgttctcattcggtggacatggacagggaaatgctaagttcaataatccatgggga
gttgctgtcgatgatttgggaagtatctatgtggctgataaggataatcaccgcgtccaa
gtcttcgacaaaaatggtcaattcattgcaaaattcggatctttcggacatctacctggt
caactaaacagtccattgttcatagcagttagcagagttactcatcacgtgtatgtatca
gattcttcgaatcatcgaatcagcgtattcgatccccacggtgttcatttgttttcattc
ggcgaggaaggttttcatggtggacaattcaaattcccacgtggaattgctattgattca
caggaaaacctaataatcgccgactccggtaacaacaggatccaagttttcgacgcccaa
ggtcaatttgtctcctctttcggaacttggggtggaggagctggacaactgaaaggtgtc
gaagatgtttgtgtcactgctgacggttcaattgttgtcaccgatcgcgagaatcatcgc
attcagatcttctaa
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