Caenorhabditis elegans (nematode): CELE_F55F8.1
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Entry
CELE_F55F8.1 CDS
T00019
Symbol
ptr-10
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
172229
NCBI-ProteinID:
NP_001370752
WormBase:
WBGene00004224
Ensembl:
WBGene00004224
LinkDB
All DBs
Position
I:5662284..5667068
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AA seq
900 aa
AA seq
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MRLGFGCLEPKAAKFFHSYGLLVSGYPFIFLVSPILVTCFLATGLIGLEPLSDALYLYTP
TDAPSKTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILDRVFSNELKLME
SFIRNNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINITYPTVRLSDKS
AYIASALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWEREFKNKMDEYK
KQAKYISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVV
TKPILSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRT
DRNLKYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAY
QLTFFCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKLFWLGSQPQKPLPSCGTVSS
TSSVSTMTSQATSPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGLWYLIYLGISIYGC
THLKEGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDLRDPVERINMDKMA
STFANCKVAIGDDSVQFWLREMQVSEEIHKIQYDNEKFYDHAAQYIYSDMSQPWVVDVVW
GRNNNSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFEQYNVTTYMPLWLFTDQY
ALVVPNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWNVNLDAI
SMITIIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLGWPVAQGAMSTILAVSVL
SDVPAYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSNKIETKSVKEPRFVGRY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttgggttcgggtgtttagaaccaaaagctgcaaaattcttccattcatacggt
cttttagtatctggttatccatttatattcctcgtatctccaatattagtcacatgcttt
ctagcgactggattaattggtttagaaccactcagtgatgctttatacctatatactcca
acagatgcacctagtaaaacggaacgacgaataatccacgacgcgtggccacttgtcgat
ggaacgtttgttgctggacgtgctgtaacacagtctcgtgaagttcaagttgcagtagta
gcaagaagtggtggaaatatacttgatagagtcttctctaatgaacttaaacttatggaa
tccttcatcaggaataatatcacagtccaattcagcaatcgtacgtggtcttttgccgat
ttatgcctagctggccctgatggtcgatgtgcaaataatgatcatattcaattggcatcc
cgacttcatcaacatggaattaatataacttatccaactgttagattatctgacaagagt
gcctacatcgcatctgcccttggcggtgtcaaacttgcaaaaggagacaatggagaaaat
ataattgtcgaagcaactgcatggcttctgatatatcaactgaaattctatccaaacgaa
atttcatatgtttctggattatgggaacgagaattcaaaaataaaatggatgagtataag
aagcaagcgaaatacatttctataacatattttcactctcaaacactttccgatgaattg
aatagaaatgcggaaagattggcaccaaaattcattggagcatttgtaatcttagtatgc
ttctcggtattatgctcaattgtaacaatcaaaggatctggatacatcgactgggttgtc
acaaaacctatcctttcagttttaggagtatcaaatgctggcatgggtattgccagtgca
atgggaatgctgacatatttggaaattcaatacaatgatattattgctgttatgccattt
cttgtagttgccgttggaaccgacaatatgtttttgatggtcgctagtttaaaacggact
gatagaaatttgaagtatgatcaacggattgccgagtgtatggctgatgcagctgtatct
attttaattactgcactcacagatgcactctcattcggtgtcggaacaatcacaacaatt
ccagctgttcagatcttttgtatttatacaatgtgtgctcttctgctcacatttgcctat
caactgacatttttctgcgcgattcttgtttactacactcgaatcgaagagcaagggctt
cacagtatctggcttcgcccagctgtaacatattcatcaacatctccgttgaatgtgaaa
ttattctggcttggctcacaaccacagaaacctctgccatcatgtggtactgtaagtagt
acatcaagtgtgtctacaatgacaagtcaggcaacttcacctgcttcaaaacatcttcat
cattgtgctgcaacttcatttttcagaaattggtacgcaccagttttaatgcaaccttgg
attcgagcaattgccggattatggtacctcatttatttgggaatctctatatatgggtgt
actcatttgaaagaaggacttgaaccagccaatttacttgtcgatgattcatatgcaaca
cctcattatcgcgttcttgagaaacattactggcattatggagcaagtcttcaaattgtt
gtcagtaatcctccagatcttagagatcctgttgagagaattaatatggataaaatggcg
tctacatttgcaaattgtaaagtggcaattggagatgacagtgttcagttttggttgaga
gaaatgcaagtttcagaggaaattcataaaattcagtatgacaatgagaagttctacgac
catgcagcgcagtacatttattcggacatgtcccaaccatgggtggtagatgtcgtttgg
ggtcggaacaacaattcggagagaattataaaaacgtttcgatttatgattggaatgcga
gatatttcaacaacaactaaacaaactgaagcaacaaataccttcagagagattgcatca
agatttgaacaatataatgtaacaacttatatgccattgtggttattcactgatcaatat
gcccttgtagttcccaacacaatgcaagacatcatagttgctgtagcatgtatgcttgtc
atatcagctcttctcattcctcaaccagtttgctctttctgggttgctgttacaattgga
tcaattgatttgggagttctcggatttatgacgctttggaatgttaaccttgatgcaatt
tcaatgattacaattatcatgtctgttggattttcagtcgattattcagctcatataaca
tatgcatatgttatttcgaaagaatcgacaacttcagcaagagtttgtgatgctcttgga
gatctcggatggcctgttgcgcaaggtgcaatgtcaacaattttggcagtttctgtattg
tctgatgtgcctgcttatatgattgttacatttttcaagacagtttttctcgcaatttca
attggattccttcatggattagtatttcttccgttgatgctttccgtttttgttggttgc
tgttcatcaaataaaatcgagactaaatcagtgaaagaacctcgttttgttggaagatac
tga
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