Caenorhabditis elegans (nematode): CELE_R06B10.4
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Entry
CELE_R06B10.4 CDS
T00019
Symbol
trp-2
Name
(RefSeq) Transient receptor ion channel domain-containing protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_R06B10.4 (trp-2)
Ion channels [BR:
cel04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
CELE_R06B10.4 (trp-2)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
192056
NCBI-ProteinID:
NP_001022703
WormBase:
WBGene00006615
Ensembl:
WBGene00006615
UniProt:
Q8I6Y9
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Position
III:<991881..>1001931
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AA seq
886 aa
AA seq
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MTSSEASEFRMIEDDDDVSNNVTWTESDNSRLREKQFLLSCERGDIGSVRKLLAGISTET
FNINCLDPLGRNALLIAIENENIEMIELLLDHNIETGDAILYAIGEENVEAVEIIVEHLE
KMDKFDSERQGVEITEHSAFTPDITPIVLAAHKDNYECIKLFLDKKGTVPHPHDVRCSCP
ECYVAREEDSLRLSRSRINAYRALTSPSLICLSARDPILYAFELSWELKRLSFIENEFRT
DYEELSQKCQKFCVHMLDQVRGSKELEVVLNHTTNAWHDVTSANYGNPEKLARLKLAIQL
SQKRFVAHPNCQQLLLDIWYEGVESVRCTNFIYKLIFYILGMLSFPLFSLVYLLAPHSSM
GQFAKKPFIKFLSHSGSYIFFLILLIMASQRMNVIDNILRTDDVDRKETRGPPPTIIECA
IFLWVLGLIWVEIKQLWECGLYNYCRNLWNILDFITNSLYLCTTALRVVAYVQVEQEALR
ANSVHIARHLPRRDWDAWDPTLLSECFFATANIFSSLKLVHIFTVSPHLGPLKISLGRMV
IDIVKFFMVYALVLFAFACGLNQLLWYYASMRQNECNLYEQYKNEKSLSYKYEHLKESCD
DKYKSCSSIYHTAETLFWALFGLVDLTHFRLKEDHFLSEWTGKTIFGSYCCCSIIVLLNM
LIAMMSNSYQYISDQADIEWKFARSRLFLEYFDDTATLPPPFNIVPSPKSIYYCLHYLTK
KLCNCTKLQQPSKQKSMRVESKNLAIRQRPRKQLPENCAKNRYSGAQFHSRNKKKTAMAE
RRLKNSALLLKEFPVPQMFKAGQRNMSISSIQSNGRLKPSFMPSSSKLSWSNLKVKASRL
SKSKSIDTTHLDVTRLHALSKKSPLQKQAHTSFDTSSLNDDTDELL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatcagaagcatccgagtttcggatgattgaagatgacgatgacgtcagcaac
aatgtcacgtggaccgagtcggacaactcgcggctccgcgagaagcagttcctgctctcc
tgcgagcggggagatattgggagtgttaggaagcttttggctggaatttcaacggaaact
tttaatataaattgtttggatccgcttggcagaaacgcgcttctcatcgcaattgaaaac
gagaacatcgagatgatcgagttactattggaccacaatattgagaccggcgacgcaatt
ctctacgcaattggagaggaaaacgtggaggcggtggagatcatagtggagcacctggaa
aaaatggacaaatttgactcggagcgccaaggagtggagatcacagagcactcagcattt
actccagacatcacaccaatagtgttagcagctcacaaagacaattacgagtgcataaag
ctgtttttggacaagaagggtacggtaccccacccccatgacgtcagatgctcctgcccc
gagtgctacgtggcaagggaagaggattctctgcgactttctaggtcacggataaatgcc
tatagagcacttacaagcccgtcgctcatctgtctttccgctcgagacccgattttgtac
gctttcgagctgagctgggagctcaagcggttgagttttattgaaaatgagttccgcaca
gattatgaggagctctcccaaaagtgccaaaaattctgcgttcacatgttggaccaggtg
cggggctccaaggaactggaggtggtgctcaatcacactacaaatgcgtggcacgatgtg
acgtcagcaaattatggaaatccagaaaaattggcaaggttgaagctggcaatacagtta
tcgcagaaaaggttcgtcgcccatcctaactgtcagcagctgcttctggatatctggtat
gaaggtgttgagtcagtgagatgtactaactttatatataagctaattttctacattctc
ggaatgctcagttttccgttattctcacttgtctacttacttgctccgcactcctcaatg
ggacaattcgccaagaagccattcatcaagttcctttcgcactctggaagctatattttc
tttctgatactccttatcatggcaagtcaacgtatgaacgtcatcgacaacatcctacgc
actgatgacgtggatcgcaaggagacacgtggacccccgcccaccataatcgaatgcgct
atatttttatgggttttaggattaatatgggttgaaatcaagcaactgtgggagtgcggt
ctctacaattattgccgaaatttgtggaatattttggattttatcacaaattccttgtac
ctttgcaccaccgccctacgtgtggtcgcctatgttcaggtagaacaagaagctctgcga
gccaactcggtgcacatcgctcgtcacctgccccgccgcgactgggatgcctgggacccc
acactgctcagcgagtgcttttttgccactgcgaatattttctcctcactgaaattggtg
cacatttttacagtgagcccacacttgggaccacttaaaatttctttgggccgtatggta
atcgatattgtgaaattttttatggtctacgcactggtactattcgcatttgcatgtggg
ctcaatcaactgctgtggtactacgcctcaatgcgccaaaacgagtgtaatttatatgag
cagtacaaaaacgaaaagtcattgagctacaagtatgagcacttgaaggaatcgtgtgac
gacaagtacaaatcctgctcgagcatctaccacaccgcggaaactctattctgggccctg
tttggcctggtagatctcacgcattttcggttaaaagaggaccatttcttgtcggaatgg
acggggaaaacgatttttggcagctactgttgttgctccataattgtgctcctgaacatg
ctcatcgctatgatgagcaattcatatcagtatatttcggatcaggcggatattgagtgg
aaatttgcgaggagccgactgtttttagaatatttcgacgacaccgccacattgccgccg
ccttttaacattgtcccatcaccaaaatcaatatattactgcctacactatttgaccaaa
aagctgtgcaattgcacaaaactacagcagccgagcaagcagaaaagcatgcgggtagaa
tcaaaaaatcttgcgatccgtcaacgaccgcgaaaacaactaccggagaactgtgcgaaa
aatcgctacagcggagcacaatttcattcacgaaacaagaaaaagaccgccatggcagag
cgtcgtttgaaaaattcggcgcttttactgaaagaattcccggtgccacagatgttcaag
gccggtcagcggaatatgagcatctcctcgattcagtcaaacgggcggctaaaaccatca
ttcatgccgagcagctccaagttgagctggagcaatctgaaagtgaaagcttcacgtctt
tcaaaatccaaatcaatcgatactacacatctcgatgttacccggttacatgcgttgagc
aaaaaatcgccgcttcaaaaacaagcccatacgagtttcgacacctccagtctcaatgac
gacactgatgaacttttatga
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