KEGG   Caenorhabditis elegans (nematode): CELE_W07E6.4
Entry
CELE_W07E6.4      CDS       T00019                                 
Symbol
prp-21
Name
(RefSeq) uncharacterized protein
  KO
K12825  splicing factor 3A subunit 1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CELE_W07E6.4 (prp-21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_W07E6.4 (prp-21)
Spliceosome [BR:cel03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CELE_W07E6.4 (prp-21)
 Complex B
    CELE_W07E6.4 (prp-21)
 Complex C
   U2 SnRNP specific factors
    CELE_W07E6.4 (prp-21)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 173440
NCBI-ProteinID: NP_493746
WormBase: WBGene00004188
Ensembl: WBGene00004188
UniProt: G5ECL3
LinkDB
Position
II:484866..490403
AA seq 655 aa
MTAVVSNREEDSMNNEPSLSGRAIIGLIYPPPDIRTIVDKTARFAAKNGVDFENKIREKE
AKNPKFNFLSITDPYHAYYKKMVYDFSEGRVEAPKVPQAVKEHVKKAEFVPSAPPPAYEF
SADPSTINAYDLDLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLV
DQYQKVLVPSTNVVAQLQDDATNKKRLIEDINYRVSWEKHQKGLKDREEAEAEKERQAYA
SIDWHDFVVVQTVDFQPGDTSQLPPLCTPKDVGARILLEARNEMQKAAAEMQEMDMEESD
SDDEDAVQAPEAPAFTAPLPPTKQKDVIVRDYDPKRNVTQKPKAVENWIISPLTGERIPS
DKLAEHVRYNTVDSQYKEDRDRHIGERSTEEPVLALGADISRNLGNFAERRTDIFGVGGE
QTMIGKKLGEEDNSQQGQNKLIWDGTEETRDMITRAVQNKVTLDQQINEIHRQHGFVADP
SKEKIGAQQVPRHQSTQGNVTITQGITNIPGQMPSGWPPVPPMGMPGMPNQALPPIRQMD
FGGGPPAKRPRTEDDLIPEADWLKKVNGAISLNVHLPQAPEHGMDGSIVQFTIQVTAPMS
ELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGGKKK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgactgcagttgtctcaaaccgcgaggaggactcgatgaacaacgagccctcgttgtca
gggcgtgcgattattggattaatctacccgccgccggatattcgcacaatcgtcgacaaa
accgcccgtttcgctgcaaaaaatggagtggactttgagaataaaatccgcgaaaaggag
gcgaaaaacccgaaattcaactttctctccatcacagacccataccatgcctactacaaa
aagatggtctacgatttctcagaaggccgagttgaggctccgaaagtaccgcaagcagtg
aaagagcacgtgaaaaaggctgaatttgtgccttcagctccaccgccggcctacgagttc
tcagcggatccatccacgattaacgcctatgatttagatttgatccgactcgttgctctg
ttcgttgcacgaaatggccgtcaatttctgactcaattgatgacacgagaagccagaaat
tatcaattcgactttttgaaaccggctcattgcaactttacatacttcacaaagctcgtt
gatcaatatcagaaggttctggtgccctctaccaacgtagttgcccaactccaagacgat
gctaccaacaaaaaacgtctcatagaagatatcaattatcgtgtatcctgggaaaaacat
caaaaaggtctaaaagatcgcgaggaggcagaagccgagaaagagcgtcaagcctatgca
tcaatcgattggcatgactttgtagttgttcagactgtagatttccagccaggagatact
tctcagcttccaccactatgcacaccaaaggacgttggagcccgtattcttttggaagcg
agaaatgaaatgcaaaaggcggcggctgaaatgcaggaaatggatatggaagagagtgat
tccgatgacgaagatgccgttcaagcaccagaagcccctgcattcactgctccgctgcca
cctacaaaacagaaagacgtgattgttcgagattacgatccgaagagaaatgtgacccaa
aagccaaaagctgtggagaactggatcatttcaccgctcaccggagagcgtattccatcg
gataagctcgccgagcacgtcagatacaatactgtcgattcacagtataaagaggacaga
gatcgtcatattggagaaagaagcacggaggagcccgtattggctcttggagctgatatt
tctagaaatcttggcaatttcgctgaacgtcgtacggatatcttcggtgtcggcggagag
cagactatgatcggaaagaagctcggcgaagaggacaattcgcaacaagggcagaacaaa
ctgatttgggatggaactgaagagactcgggatatgattacccgagctgtacagaataaa
gtcactttggaccaacaaatcaacgaaatccaccgtcaacacggattcgttgccgatcca
tcaaaggaaaagattggagctcagcaggtgccacgtcatcaatcgacccagggaaatgtg
acaattactcaaggaataacgaatattcctggacaaatgccatccggatggccgccggtt
ccaccaatgggaatgcctgggatgccgaatcaagcgcttcctccaatccgacaaatggac
tttggcggtggacctccagcgaagcgtcctcgtaccgaagatgatttgataccagaagct
gattggcttaaaaaggtcaacggagcaatttcgcttaatgttcatcttccacaggctccc
gaacacggaatggatggctcaattgtgcagtttacaattcaagttactgcaccgatgtcc
gaactcaaacaacaaatccaggatcgttacggaatgcctgttggaaagcagaagctgatg
tctgatggccttttcgtgaaggataatatgagctcggccttctacaatttggcagatcgg
acggcgatttatctgcaagtgaaggagcgtggaggaaaaaagaagtga

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