Caenorhabditis elegans (nematode): CELE_Y57G11C.1
Help
Entry
CELE_Y57G11C.1 CDS
T00019
Symbol
haf-8
Name
(RefSeq) HAlF transporter (PGP related)
KO
K02021
putative ABC transport system ATP-binding protein
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_Y57G11C.1 (haf-8)
Transporters [BR:
cel02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
CELE_Y57G11C.1 (haf-8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_16
AAA_7
AAA_30
SbcC_Walker_B
AAA_5
DUF5906
nSTAND1
Motif
Other DBs
NCBI-GeneID:
190369
NCBI-ProteinID:
NP_502776
WormBase:
WBGene00001818
Ensembl:
WBGene00001818
UniProt:
O18227
LinkDB
All DBs
Position
IV:complement(<14694032..>14699940)
Genome browser
AA seq
633 aa
AA seq
DB search
MRISCSKSVPFSDLININTGAAGEIVDKNDDEEENRLPLSEHLWEIVKLCGKQWRWFVPA
YTLLILDCALNLIEPALYGQMMTNAIQMKSFDIIKRACLLLALIQFSEATCKSACYFFMQ
YAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRITHDSESISNTLPVHIETLVNNL
FMFFGSIPIMFCYSWQLTLTSFIEFPITLLMTRYYGLAVEKLSEKENDATAASNETVEEV
LSAIRTVRSFAAENFEQKRYTKNTEDWFKISTKTVTLGTIYNYFWALMLRSQDVIRYLYG
GYLALNGRMAPEALLTFIFYHWRLHTAINAFSSLFSGVMKTIGLSRKVIHLINRKPQLDY
DFGTETPEIQGKIEFEVVEFAYPTRKTVNVINGINLSIESGKTVALVGPSGNGKSTLVSL
IQQFYTPQSGRILTDGIPIQNINHQHYHSNIALVAQEPTLFSGTIRENILFGIENGTEEA
MLKAAEMANVHEFVSKMDDGYDTKCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATS
ALDSESEGMVQEALNKCAKERTVIVIAHRLSTVRKAQKIAVIENGSVKEMGCHDELMENQ
DGLYYKLVSKQLGSIVDTNIFNCFDMLIFFVLF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcagttgttcaaaatcagtgcctttttcagatttaataaatataaatacaggc
gctgccggggaaatcgtggataaaaatgacgatgaagaagaaaaccgactcccattatcc
gaacatttatgggaaattgtgaagttatgtgggaagcagtggagatggtttgttccagca
tatacacttctgattctggattgtgctttgaaccttatcgaaccagccttgtatggtcaa
atgatgacaaatgcgattcaaatgaaatcttttgatattatcaaacgagcctgcctactg
ctggcactcatccaattctcagaagctacatgcaaatcggcttgttactttttcatgcaa
tacgctgaaaagttaactgcaaggaatattcgtatccaacttttccgttcaattctccat
caggaaatctcattttttgatgagaataaaacaggacaattggtgtcaagaatcacacat
gactcggaatccatttcaaatactcttccagttcacattgaaacacttgtcaacaatcta
ttcatgttttttggatccattccaatcatgttttgttattcatggcagttgacattaact
tcattcattgaatttccaattactctgttaatgacaagatattatggattggcagtggag
aagctatcagaaaaggaaaatgatgcaactgcagcttcaaatgaaactgttgaagaagta
ctttcagctatccgaacagttagatcattcgctgctgagaatttcgaacaaaaacgatac
actaagaatacggaagactggttcaagattagcacaaagactgtgacacttggaactatc
tacaactatttttgggctcttatgttacgttcgcaagatgttattcgatatttatatgga
ggatatttggcattaaatgggagaatggctccggaggcattgctaacttttatcttttat
cactggagacttcatactgcgatcaatgcgttcagttccctattctctggcgtcatgaaa
accattggtctatcccgaaaagtgatacatctgatcaatagaaaaccacaacttgactat
gattttgggactgaaactccagaaattcaaggaaaaattgagtttgaagtagttgaattt
gcatatccgactcggaaaacagtaaatgtaataaatggaatcaacttatcaattgaatca
ggaaaaactgttgccttggttggaccgagtggaaatgggaaatctactttggtttcttta
attcaacaattttatactccacaatctggaagaatattgactgatggaattccaattcag
aatattaatcatcaacattatcactcaaatattgcccttgttgctcaagaaccaacatta
ttctcaggaactatcagagaaaatattctttttggaattgaaaatggaacagaagaagct
atgttgaaagccgctgaaatggcaaatgttcatgaatttgtgtcaaaaatggatgatgga
tatgatacaaagtgtggagagaagggtgttcaaatgtctggaggtcagaagcaacgaatt
gcaatcgcaagagctcttatcagaaatccacgtgttttaatccttgatgaagccacgtca
gcattagattcagaatctgaaggaatggttcaagaagcattgaataaatgtgcaaaagaa
cgtactgttatagtgattgcacatcgcctttcaactgtacgaaaagcccagaaaattgct
gtaattgaaaatggaagtgtgaaggagatgggatgtcatgatgaattgatggagaatcag
gatgggctttactacaaattagttagcaagcaacttggttcaattgttgatacaaatatt
tttaactgcttcgatatgctaatattttttgtccttttttag
DBGET
integrated database retrieval system