Caenorhabditis elegans (nematode): CELE_Y65B4BR.3
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Entry
CELE_Y65B4BR.3 CDS
T00019
Symbol
ptr-21
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
191752
NCBI-ProteinID:
NP_490751
WormBase:
WBGene00004235
Ensembl:
WBGene00004235
UniProt:
Q9N2Z6
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All DBs
Position
I:550696..556709
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AA seq
909 aa
AA seq
DB search
MEGDELVHRPTVLSTTASATSRPRHKTFELLGPVNNISLADMYKVCGKIIGRFPIAFIIA
TVIMCSGGLGTIGLELKDNVRDGYTPKNSLSRLENRLYREFLSSEGDPVMTTVLMTAKDG
GSMHRIKYLEEAQRQWLYISKNLSADVGNGEFMKFGDFCGHYCQANDIIGYFLDAYKTKS
ADPKMDGYQLNYPITTVMGYQLHLERNFFGVTVNQSDPVTNIQSMKVLTLPVLSEVRTFE
DTDKLNKWELAVYNYATGYSALEGDDHLVEINVIGAEVVDTEMNKDAQKMVPYFIVGIVS
MIIFIFCTVSISASYYGYFSWRIGLIALACLLVPILAILTAFGINNMLGNRTNSPMMIMP
FLINGIGVNDAFLTLQNWLQHSPDLPSGKRLGYMLAEAGPSITTTTLTNVIVFLIGWMNP
TEEMSIFCLGCAISLLLAYVYTLTFFCPVLVLLLSERVNEPSKLEGTFNKVLGFYAKIIC
SRWTFALLIIGSLVYWGFGIYGTLGIRAVLNTAKILPLETPIRKPNRIIEETVWKEFYPV
TVIVNSPVDISNANALRAFDNLVHDFESMEKCRGSEYTISPIRDYQTYFYGVGAEDFDYE
EETVKNTSHSLDFSKLTGFLANPIYKHHKGGLKLNFSNPVPIRKVQLIFAYENVTSWDER
IQIMQDWRTIASSHVALNVSVWNVNAMFVDQMLSLKGLAISNALVTLGCMAAVCVVFIRN
PLSVGLATASILSISIGVTGYLCFWDLDLDPVTLCAVIVSIGMSVDFVAHVACHYQVRYK
EFEEKGVLKRIEMKTPESRVVNSLSNVLWPMVQSASSTLLCVLPLGILQNYLPMVFVKTI
LLVVIWGMFHGLVLLPCILAQFPLSVFNKTFADLLFGRTSSSSCSSESDSETDTGDAQEM
VPLAGTEKA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacgagttggttcatcgtccgacggtcctctcgacgacggcttctgccacg
tcacggccgcgacacaagacttttgagctgttgggtccggtgaataatatctcgttggct
gatatgtataaagtgtgcgggaagataattggcaggttcccgattgcatttattattgcg
acggtgatcatgtgcagtggtggattaggaacaatcggtctcgaactgaaggataatgtg
cgcgacgggtacacgccgaaaaactcgctatcccgactggaaaatcgcctttatcgagag
ttcctgagttccgaaggtgatccggtgatgactacagttctcatgactgccaaagacgga
ggatccatgcatcggatcaagtatttggaagaagcacagaggcaatggctctacatctcc
aaaaacctatccgcagacgttggaaacggcgagttcatgaaattcggagatttctgtggc
cactactgccaagccaacgacatcataggatacttcctggacgcctacaaaaccaagtca
gctgacccaaaaatggatggctaccaactcaattacccaattaccacagtaatgggttat
cagcttcatctcgagcgtaactttttcggggttactgtgaatcagtcggatccggtcact
aatattcagagtatgaaggttctgacgcttcctgtgttgtcagaggtacggacgtttgag
gatacggataagctgaacaagtgggagctggcggtttataactatgctacaggatactct
gcactcgagggtgacgatcatttggtggagattaatgtgatcggtgctgaagtcgtcgac
accgaaatgaacaaggacgctcagaaaatggtgccctacttcatcgtcggaatcgtctcg
atgatcatctttatcttctgcaccgtatccatctctgcctcctactacggatacttctcc
tggcgaatcggactcatcgccctcgcctgcctcttggttccgattctcgcaattctcact
gcattcggaatcaataatatgctgggaaatcgaacgaactctccgatgatgatcatgccg
ttcttgatcaatggaatcggagtcaacgatgcgtttttgacacttcagaattggttgcag
catagcccggatcttccgtcagggaagcggttggggtatatgttggctgaagctggtcca
tcgatcactacgaccactttgacaaatgtcattgtttttttgatcgggtggatgaaccca
acggaagagatgtcaatcttctgccttggatgtgcaatctccctactcctcgcctacgtc
tacaccctcacgttcttctgtccggtgctagttcttctgcttagcgaacgcgtcaatgag
cccagcaagctcgagggcactttcaacaaggttctcggattctacgcaaaaatcatatgc
agccgatggacatttgcacttctcatcatcggaagtcttgtctactggggtttcggtatc
tatggaacactggggatccgtgccgtgttgaacactgcaaagatccttcccctggagacg
ccgatccgcaaaccgaacaggattatcgaggagaccgtgtggaaagagttctacccagtc
accgtgattgtgaacagcccagttgatataagcaatgcaaatgcacttcgagcatttgac
aacctcgttcacgactttgaatcgatggaaaagtgccggggatccgagtacaccatatct
ccaatcagagactatcagacctatttttacggtgtaggagccgaggactttgattatgag
gaagaaaccgtgaagaacacctcacattctttagatttcagtaagctcaccggattcctt
gccaaccctatctacaagcatcacaagggaggactaaaacttaacttttcaaatcctgtt
ccaatccgaaaagtgcaactgatattcgcttatgaaaacgtaacctcgtgggatgaacgg
attcagattatgcaggactggcggaccatcgcaagttcccacgtggccctaaatgtttca
gtgtggaatgtgaacgcaatgttcgtagatcaaatgctgagcctgaagggattggcgatc
tcgaatgccctagtcaccttgggatgtatggctgccgtctgtgtagtcttcatccgcaac
cccctctcagttggcctagcgaccgcttcgattttatccatctccattggagtaactgga
tacctgtgcttctgggacttggatctggaccctgtgaccctgtgcgcagtaattgtttca
attggaatgtccgttgactttgttgcccatgtggcctgtcactatcaggtcaggtataaa
gagttcgaggagaaaggagtattgaagaggattgagatgaaaactcccgaatctcgagtc
gtcaactcgctgtccaatgtgctctggccaatggtccagtcggcttcttcaactcttcta
tgtgtacttccacttggtattctacagaactacctcccaatggttttcgtgaaaaccatc
ctgctcgtcgtgatctggggaatgttccacggtcttgtgctgctcccgtgcattcttgca
cagtttcccctgtctgtgttcaacaagacgttcgccgacttgttgttcggcagaacatcc
tcttcgtcttgctcttcggagtccgattcggaaaccgacaccggtgatgctcaggagatg
gttccgctcgctggaaccgagaaggcttaa
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