KEGG   Caenorhabditis elegans (nematode): CELE_Y65B4BR.3
Entry
CELE_Y65B4BR.3    CDS       T00019                                 
Symbol
ptr-21
Name
(RefSeq) SSD domain-containing protein
Organism
cel  Caenorhabditis elegans (nematode)
SSDB
Motif
Pfam: Patched Sterol-sensing
Other DBs
NCBI-GeneID: 191752
NCBI-ProteinID: NP_490751
WormBase: WBGene00004235
Ensembl: WBGene00004235
UniProt: Q9N2Z6
LinkDB
Position
I:550696..556709
AA seq 909 aa
MEGDELVHRPTVLSTTASATSRPRHKTFELLGPVNNISLADMYKVCGKIIGRFPIAFIIA
TVIMCSGGLGTIGLELKDNVRDGYTPKNSLSRLENRLYREFLSSEGDPVMTTVLMTAKDG
GSMHRIKYLEEAQRQWLYISKNLSADVGNGEFMKFGDFCGHYCQANDIIGYFLDAYKTKS
ADPKMDGYQLNYPITTVMGYQLHLERNFFGVTVNQSDPVTNIQSMKVLTLPVLSEVRTFE
DTDKLNKWELAVYNYATGYSALEGDDHLVEINVIGAEVVDTEMNKDAQKMVPYFIVGIVS
MIIFIFCTVSISASYYGYFSWRIGLIALACLLVPILAILTAFGINNMLGNRTNSPMMIMP
FLINGIGVNDAFLTLQNWLQHSPDLPSGKRLGYMLAEAGPSITTTTLTNVIVFLIGWMNP
TEEMSIFCLGCAISLLLAYVYTLTFFCPVLVLLLSERVNEPSKLEGTFNKVLGFYAKIIC
SRWTFALLIIGSLVYWGFGIYGTLGIRAVLNTAKILPLETPIRKPNRIIEETVWKEFYPV
TVIVNSPVDISNANALRAFDNLVHDFESMEKCRGSEYTISPIRDYQTYFYGVGAEDFDYE
EETVKNTSHSLDFSKLTGFLANPIYKHHKGGLKLNFSNPVPIRKVQLIFAYENVTSWDER
IQIMQDWRTIASSHVALNVSVWNVNAMFVDQMLSLKGLAISNALVTLGCMAAVCVVFIRN
PLSVGLATASILSISIGVTGYLCFWDLDLDPVTLCAVIVSIGMSVDFVAHVACHYQVRYK
EFEEKGVLKRIEMKTPESRVVNSLSNVLWPMVQSASSTLLCVLPLGILQNYLPMVFVKTI
LLVVIWGMFHGLVLLPCILAQFPLSVFNKTFADLLFGRTSSSSCSSESDSETDTGDAQEM
VPLAGTEKA
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggagggcgacgagttggttcatcgtccgacggtcctctcgacgacggcttctgccacg
tcacggccgcgacacaagacttttgagctgttgggtccggtgaataatatctcgttggct
gatatgtataaagtgtgcgggaagataattggcaggttcccgattgcatttattattgcg
acggtgatcatgtgcagtggtggattaggaacaatcggtctcgaactgaaggataatgtg
cgcgacgggtacacgccgaaaaactcgctatcccgactggaaaatcgcctttatcgagag
ttcctgagttccgaaggtgatccggtgatgactacagttctcatgactgccaaagacgga
ggatccatgcatcggatcaagtatttggaagaagcacagaggcaatggctctacatctcc
aaaaacctatccgcagacgttggaaacggcgagttcatgaaattcggagatttctgtggc
cactactgccaagccaacgacatcataggatacttcctggacgcctacaaaaccaagtca
gctgacccaaaaatggatggctaccaactcaattacccaattaccacagtaatgggttat
cagcttcatctcgagcgtaactttttcggggttactgtgaatcagtcggatccggtcact
aatattcagagtatgaaggttctgacgcttcctgtgttgtcagaggtacggacgtttgag
gatacggataagctgaacaagtgggagctggcggtttataactatgctacaggatactct
gcactcgagggtgacgatcatttggtggagattaatgtgatcggtgctgaagtcgtcgac
accgaaatgaacaaggacgctcagaaaatggtgccctacttcatcgtcggaatcgtctcg
atgatcatctttatcttctgcaccgtatccatctctgcctcctactacggatacttctcc
tggcgaatcggactcatcgccctcgcctgcctcttggttccgattctcgcaattctcact
gcattcggaatcaataatatgctgggaaatcgaacgaactctccgatgatgatcatgccg
ttcttgatcaatggaatcggagtcaacgatgcgtttttgacacttcagaattggttgcag
catagcccggatcttccgtcagggaagcggttggggtatatgttggctgaagctggtcca
tcgatcactacgaccactttgacaaatgtcattgtttttttgatcgggtggatgaaccca
acggaagagatgtcaatcttctgccttggatgtgcaatctccctactcctcgcctacgtc
tacaccctcacgttcttctgtccggtgctagttcttctgcttagcgaacgcgtcaatgag
cccagcaagctcgagggcactttcaacaaggttctcggattctacgcaaaaatcatatgc
agccgatggacatttgcacttctcatcatcggaagtcttgtctactggggtttcggtatc
tatggaacactggggatccgtgccgtgttgaacactgcaaagatccttcccctggagacg
ccgatccgcaaaccgaacaggattatcgaggagaccgtgtggaaagagttctacccagtc
accgtgattgtgaacagcccagttgatataagcaatgcaaatgcacttcgagcatttgac
aacctcgttcacgactttgaatcgatggaaaagtgccggggatccgagtacaccatatct
ccaatcagagactatcagacctatttttacggtgtaggagccgaggactttgattatgag
gaagaaaccgtgaagaacacctcacattctttagatttcagtaagctcaccggattcctt
gccaaccctatctacaagcatcacaagggaggactaaaacttaacttttcaaatcctgtt
ccaatccgaaaagtgcaactgatattcgcttatgaaaacgtaacctcgtgggatgaacgg
attcagattatgcaggactggcggaccatcgcaagttcccacgtggccctaaatgtttca
gtgtggaatgtgaacgcaatgttcgtagatcaaatgctgagcctgaagggattggcgatc
tcgaatgccctagtcaccttgggatgtatggctgccgtctgtgtagtcttcatccgcaac
cccctctcagttggcctagcgaccgcttcgattttatccatctccattggagtaactgga
tacctgtgcttctgggacttggatctggaccctgtgaccctgtgcgcagtaattgtttca
attggaatgtccgttgactttgttgcccatgtggcctgtcactatcaggtcaggtataaa
gagttcgaggagaaaggagtattgaagaggattgagatgaaaactcccgaatctcgagtc
gtcaactcgctgtccaatgtgctctggccaatggtccagtcggcttcttcaactcttcta
tgtgtacttccacttggtattctacagaactacctcccaatggttttcgtgaaaaccatc
ctgctcgtcgtgatctggggaatgttccacggtcttgtgctgctcccgtgcattcttgca
cagtttcccctgtctgtgttcaacaagacgttcgccgacttgttgttcggcagaacatcc
tcttcgtcttgctcttcggagtccgattcggaaaccgacaccggtgatgctcaggagatg
gttccgctcgctggaaccgagaaggcttaa

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