Caenorhabditis elegans (nematode): CELE_Y92C3B.2
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Entry
CELE_Y92C3B.2 CDS
T00019
Symbol
uaf-1
Name
(RefSeq) Splicing factor U2AF 65 kDa subunit
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_Y92C3B.2 (uaf-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y92C3B.2 (uaf-1)
Spliceosome [BR:
cel03041
]
Complex A
U2 snRNP components
U2 related factors
CELE_Y92C3B.2 (uaf-1)
Complex B
CELE_Y92C3B.2 (uaf-1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
175270
NCBI-ProteinID:
NP_001022967
WormBase:
WBGene00006697
UniProt:
P90978
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Position
III:complement(<1062794..>1076555)
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AA seq
496 aa
AA seq
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MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENLKSSTGGGGGEDDNDRKK
RKRSRSRDRDTRRRSRSRDRGERRGGGGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEAR
SRREPEPQKPREPKKYRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVT
CQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSI
DETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPN
YLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQ
LVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEI
LEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRT
VVTSYYDVDKYHNRQF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaccaggatggcatgaaacttgaagatattgaacgccaatttttggacgtt
gctcaacgtgaaggaggtctcgaagcgattcagccgaccactggaccactggaaaatgaa
gaaaatctgaaatcatcgactggtggtggtggtggagaggatgataatgatcggaaaaag
agaaaacgatcgagaagtagagatcgcgatacgagaagacgctcgagaagtcgtgatcgt
ggagaacgtcgtggtggtggaggtggaggtgatcgtgatcgttctcgatcccgtgaacgt
cgtcgaggcggtggtggtcgtgatgagccgagacgtcgtggaggtgatgatgaagcccgt
tcgcgccgtgagccggagccccagaagcctcgtgagcccaaaaagtaccgattctgggat
gttccgccgactggattcgagacaactacaccgatggagtacaagaatatgcaggcggct
ggacaggttccacgtggatctgtacagtctgcagtgcccgttgttggcccatcagtgact
tgtcaatcacgtcgtctctacgttggaaatattccgttcggatgcaatgaagaagctatg
ctcgactttttcaatcaacaaatgcacctctgtggattggctcaagcgcctggaaatccg
attcttctgtgccaaataaatttggacaaaaatttcgcattcatagaattccgttcaata
gacgaaacgacggccggaatggcatttgacggaatcaatttcatgggacaacagttgaaa
gttcgacgtccaagagactatcaaccatctcaaaatacgtttgatatgaactctcgtatg
cctgtttcaacgattgtcgtcgattcggccaataagatctttatcggtggtctgcccaac
tatttgactgaggatcaggtaaaagagcttttgtgctcatttggaccgcttaaggcgttc
tcgttgaacgttgattcgcaaggaaatagcaaaggatacgcgttcgccgaatatttggac
ccaactctcactgatcaggccatcgccgggctcaacggtatgcaactcggcgacaagcag
ctcgtcgttcaacttgcctgtgctaatcaacaacgtcataacacaaatctgccgaactct
gcgtcagcaattgccggaattgatctctcccaaggagccggccgagccactgagatcctt
tgtctcatgaatatggtgactgaggatgagctgaaagctgatgatgagtacgaagagatt
ctggaggatgtacgcgatgaatgctcaaaatatggaattgttcgctcgttggaaattcca
agaccgtatgaggatcatccggttccaggtgttgggaaggttttcgtcgaattcgcctcc
acatccgactgtcaacgtgctcaggctgctctgaccggacgaaaattcgcgaatcgcacc
gtcgtcacctcctactatgacgtcgacaagtaccacaatcgtcaattctaa
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