Caenorhabditis elegans (nematode): CELE_ZK1128.5
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Entry
CELE_ZK1128.5 CDS
T00019
Symbol
ham-3
Name
(RefSeq) SWI/SNF chromatin-remodeling accessory subunit 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_ZK1128.5 (ham-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_ZK1128.5 (ham-3)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_ZK1128.5 (ham-3)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CELE_ZK1128.5 (ham-3)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CELE_ZK1128.5 (ham-3)
PBAF complex
CELE_ZK1128.5 (ham-3)
GBAF(ncBAF) complex
CELE_ZK1128.5 (ham-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
176426
NCBI-ProteinID:
NP_499250
WormBase:
WBGene00044072
Ensembl:
WBGene00044072
UniProt:
Q09646
LinkDB
All DBs
Position
III:10120781..10122925
Genome browser
AA seq
446 aa
AA seq
DB search
MQTQARPPVPQGPRFNHPATPQQVRRPINAPLPGQTAQIQGNRGPQPPKKKKRYADKLIQ
PKVRELVPESQAYMDLLAFEQKLDSTITRKKIDVQEALKRPQKIKKRLRIYISHTFIAGK
EPEKEGDDASVPMWELRVEGRLLDDMQHPTVGANPRPAPKRKFSSFFKSLVIELDKDIYG
PDNHLVEWHRTPQTNETDGFQVKRPGDRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAE
TRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCFGVSKMRFMEIPQRLHQLLQQPDP
LVLNHIIQRPDDGQDKTSACYDIDVELEDPVKQQMANFVHNQTNANDIQLLDQKIFDLVD
QINEMKLRRDFFLRFSNEPSGFIKKWVVSQNSDLKTLTESSGDGESDRYATTYSTTDTDE
GVSRYMYQKIQQKRAELEQSLGIRNN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcaagcgcggccaccagttccgcaggggccaagattcaaccatccggcaaca
ccacagcaagtacgtcggccgattaacgcgccgttgcctggacaaaccgctcaaatacag
ggaaaccggggcccacagcctccgaaaaagaaaaagcgatatgccgataaattaattcaa
ccaaaggttcgcgaactggttcccgaatcacaagcctatatggacttgttagcatttgag
cagaagcttgattcaacaattacaagaaagaagattgatgttcaagaagctctgaaaaga
ccccaaaaaatcaagaaacgtcttcgtatatacatatcacacacatttatagctggaaaa
gaaccagagaaggaaggcgacgatgcatctgttcctatgtgggaattacgtgttgaagga
cgacttttagatgatatgcaacatcccacagttggagcaaatccccgtccagctccaaaa
cggaaattcagttcatttttcaaaagcctagttattgagctggataaagatatatatggc
ccagacaaccatctcgttgagtggcaccgtactccacaaaccaatgaaactgacggattt
caagtgaagcgccccggagatcgtcccgttaaatgcacaatccttcttctactcgattat
cagccaatgaagtttaaacttcatccgagacttgcaaaagttctcggaattgctgcagaa
actcgtccgagaattattgaagccctgtggcagtacatcaaaactcacaagcttcaagat
ccacaggatcgtgatacaatcaataatgatcttttcttggagcaatgttttggtgtgagc
aagatgagatttatggagattcctcaaagacttcatcaactcttgcaacagcctgatcct
ttagtcttgaatcatattattcagcggcctgatgatggtcaagataaaacttctgcttgt
tatgatattgatgtcgagctcgaggatccagtcaaacaacaaatggcaaatttcgttcac
aatcaaacaaatgcgaacgacattcaactacttgatcaaaaaatattcgacttggtagat
caaataaacgagatgaagctgcgtcgtgatttcttccttcgtttctcgaacgagcccagt
ggattcatcaagaaatgggttgtaagccagaattctgacttgaagactttaacagaatca
agtggtgatggagaatccgatcgttatgcgacaacgtacagtacaactgatacagatgaa
ggtgtatcacggtacatgtatcagaaaatccaacaaaaacgagccgagctggagcaaagt
ctcggaatccgcaacaattaa
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