Caenorhabditis elegans (nematode): CELE_ZK270.1
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Entry
CELE_ZK270.1 CDS
T00019
Symbol
ptr-23
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
SecD_SecF
Phage_fiber_2
Motif
Other DBs
NCBI-GeneID:
173362
NCBI-ProteinID:
NP_493603
WormBase:
WBGene00004237
Ensembl:
WBGene00004237
UniProt:
G5EE13
LinkDB
All DBs
Position
I:14909240..14913083
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AA seq
983 aa
AA seq
DB search
MDGSIARPRRQSLLIGQRSLDVYNEVDQGPRFVRWIIGKFRKWGFLIAKHAWLAILICLI
ISTLAIVKILLTKQANDITGYTPYGARAKDEYLEYQKFFSSSGLPIAAYLYIVAKDEGSM
SRPDYLDETIQVLNFALNNITMYDSISGKSETFNQFCQSFCQINEPVRQFYNGYQILSDG
EQNSRIKIQYPVSDMFGRQFSLQPNFFGVELFDQPDDAAKLLDSADGDPVIELNATKLVD
PVSRITNVKSVKMITLQFRAEHKPGWTEAQVKKWEMSLVDIFEKRYNSKRLKIYAYSQSY
VEEEMVRGGIIMIPYLVVGFAIMCLCSCVLVMIRALYMHQENGYKIILAIMACLTPLLAC
ATALALMFLCGVRFASILCVIPFLVLSIGVDSSYLMIHEWQRVTKHMRETPRKKDSVGHR
MSEVMAEVGPAILISCLTNMFADAVGSFTSSPEITLLCTGNMLSMWFAFIYQMTFYAGLM
SIVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTH
LMTTPLVFVSVCLVYIAYLAFSVYGITQLNINLTAQKLFALDSPLLELDDLRIKYQVPVY
SMATVFVNTPGKLENPARLKRLNEFVREMESINGTWGEGWGELGTKYFVRDYDVFQQSFG
SEDEDDEDFMDDDKPVTVHSDDKMTYREDELKYFLKWPEYDFWQGFVKLRNATNSTDPEA
EELDRFFFTTGYHGDNLTIWTQRGEMLRAWRQVVDKYPDFGASVFHEDGVYLDLIDNMPT
DTWQSILGTLVCMAMVCFVFLNNWFTVAIASLSVLSICAGILGFLSWWKVDLDPITMAAM
IISIGFSVDIPAHVSYHYYQASIQEGPMSPPSSRLANCLSSVAFPALQAALSTILCVCSL
LFVNLYMAEVFVKTMVLCVVLCNLHGLVFLPAILILLDSIRWACRPKGAAAQRPKQPKTN
SRQKQKNDKVQPEKSVVTDRPEI
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagcatcgctcgcccccgacgtcagtcgttgcttattggacaacgctcactt
gacgtttacaacgaggtggatcaaggacctcgatttgtccgatggattattggaaaattc
cgcaaatggggtttcctgatcgccaagcacgcctggcttgctatattaatctgccttatt
atctccacacttgccatagtgaaaattttactcaccaaacaagcaaatgatatcacagga
tatacaccttacggagcacgagcaaaagacgagtatctagagtatcagaagtttttctca
agctcaggattgcctatcgccgcctatctttatattgtggcaaaggatgaaggaagtatg
tcacgcccggattacttggatgaaaccattcaagttttgaatttcgctttgaacaatatc
acaatgtatgattcgatttctggaaagagtgagacattcaatcagttttgccagagtttc
tgccaaatcaatgaaccagttcggcagttttataatggttaccaaattttgagtgatggg
gaacaaaattcgagaattaagattcagtacccagtatctgatatgtttggaagacagttt
tctcttcagccaaacttttttggagttgaattgttcgatcaaccagatgacgcagctaaa
cttcttgactctgctgacggagatccagtcattgaactaaacgccactaaactcgtcgat
ccggtctccaggataacaaatgtaaagtcagtcaaaatgattacattgcaatttcgtgcc
gaacacaagcctggatggaccgaagcacaggtgaaaaaatgggaaatgagtttggtggac
atttttgaaaaacgatacaattccaaacgtttgaaaatttacgcttattctcaatcatac
gtggaagaggagatggttcgaggcggaattatcatgattccctacctcgttgtaggattt
gctataatgtgcctctgtagttgcgtgctcgttatgatacgtgctctgtacatgcatcaa
gagaatggatataaaatcattctcgcaattatggcatgtctgactcctcttttggcttgt
gccactgcactggctctcatgttcctgtgcggagttcggttcgcttcaattctctgtgtc
attccatttttggtcctttccattggtgtcgattcatcatatctcatgatccacgaatgg
cagcgggtcacgaagcacatgcgtgagactccaaggaagaaggacagtgtcggacatcgc
atgagcgaagtcatggccgaagttggtcccgcgattctcatttcctgtctgactaacatg
tttgccgatgctgttggctcattcacttcatcacctgaaattacgttgctttgtactgga
aacatgttgtcaatgtggtttgccttcatctatcaaatgacattttacgctggattgatg
tcgatagtcggtggatatgaattcggatcggacgaaattgacaaaaatcgaatggaaatc
aacattgcggaaaatcgtgtgaacattgctcggcatcacagaccccttacccgtcaaccc
tcaaaattccacgaagccactcaaccaattatcagtgattctctacaaaaatatacacat
ttgatgacgacaccgctggtttttgtgtcagtttgcctcgtttacattgcttatctagca
ttcagtgtctatggaatcacccagctgaatattaatctgactgctcagaagctgtttgcg
ctggattctcctttgctagagcttgatgatttgagaattaagtatcaagtacccgtgtat
tccatggctacggtttttgttaacactccaggaaaattggaaaatcctgcaagattgaaa
aggcttaacgaatttgtccgtgaaatggaatcaataaatggcacatggggagaaggttgg
ggtgaacttggaacaaaatacttcgttagagattatgacgtgttccagcaatcattcggg
agtgaagatgaagatgacgaagattttatggacgatgataagccagttacagtgcactcc
gacgataagatgacttatagagaggatgagctcaagtacttcctaaaatggcctgaatac
gatttttggcaaggattcgtcaagttacgaaatgcaacaaactcaacagatccagaagct
gaagaactggaccgtttcttcttcactaccggatatcacggagataatctgacaatttgg
acgcagcgtggagaaatgcttagagcttggagacaagtcgtggacaagtatcctgacttt
ggcgcgtcggtgttccacgaggatggtgtctatcttgatctcatcgacaatatgcctact
gacacgtggcaatcgattctcggaactctcgtttgcatggcaatggtgtgctttgttttc
ctgaacaattggtttactgtagctattgcctcactctccgttttgtcaatttgtgctgga
attctaggatttttgtcatggtggaaagtggatttagatccaatcacaatggctgcaatg
attatctccattgggttctctgtcgatattcccgctcacgtatcatatcattactatcaa
gcttcaatacaagaaggacccatgtctccgccatcatctcgtcttgcaaactgtctatct
tctgttgcattcccagcattgcaggcagcgttgtccacaattttgtgtgtctgcagtcta
ttatttgttaacctgtatatggcagaagtattcgtgaaaaccatggtgttatgtgtagta
ctgtgcaatcttcatggtctcgtgttcttacctgctatcttgattcttttggattctatt
cgatgggcttgtaggcctaagggtgctgctgcacaacgtccaaagcagccaaaaaccaat
tctcgccagaaacagaaaaacgacaaagttcagccggaaaagagtgtggtcactgatcga
ccggaaatctaa
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