Canis lupus familiaris (dog): 612170
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Entry
612170 CDS
T01007
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
612170 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
612170 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
612170 (LSM7)
03041 Spliceosome [BR:
cfa03041
]
612170 (LSM7)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
612170 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
612170 (LSM7)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
612170 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
612170
NCBI-ProteinID:
NP_001274010
Ensembl:
ENSCAFG00000019409
VGNC:
42846
UniProt:
A0A8C0MVY2
A0A8I3NI64
LinkDB
All DBs
Position
20:56526078..56530718
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagagaagaagaaaaaagagagcatcttggacttgtcgaagtacatcgac
aagacgattcgggtgaagtttcagggaggccgcgaagccagcggcatcttgaaggggttc
gacccactcctcaatctcgtgcttgacggcaccgtggagtacatgagagaccccgacgac
cagtacaagctgacagaggacacccgccagctgggcctggtggtgtgcaggggcacatcc
gtggtgctcatctgccctcaggacggcatggaggccatccccaaccccttcatccagcag
caggacgcctag
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