Citrobacter farmeri: CI104_03145
Help
Entry
CI104_03145 CDS
T05012
Name
(GenBank) transcriptional regulator TdcA
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_03145
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CI104_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Longin
Stonustoxin_helical
HTH_28
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AST78149
LinkDB
All DBs
Position
617523..618461
Genome browser
AA seq
312 aa
AA seq
DB search
MNTFALPKTQQLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEAYFGVELVVRKNTG
VTLTHAGQVLLSWSESITREMKNMVNEMNSMTDNTVVDISFGFPSLIGFTFMSDMIQKFK
EVYPKSQVSMYEAQLSSFLPAIRDGRLDFAIGTLSDEMKLQDLHVEPLFESEFVLVANKS
RTCTGTTTLESLQNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA
DFLTVIPCDMAAPFGSNQFITLPVEESLPIARYAAIWSKNYRIKKAASVLVELAKEYSSY
KGCRRKQLIEIN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgttcgctctccctaaaacacagcagttggtggtctttcaggaagtaatcaga
agcggttctatcggttctgcggcaaaagaattagggttaactcaaccggctgttagtaaa
attattaacgatattgaagcttatttcggtgttgagttggtggttcgcaaaaataccggt
gtcaccttaacccatgccggacaggttttactctcctggtccgaatccatcacccgtgag
atgaagaacatggtgaatgagatgaacagcatgaccgacaacacggtggttgatatctca
ttcgggtttccttcgctgattggttttacctttatgtccgatatgatccagaagtttaaa
gaggtctacccaaaatcgcaggtctccatgtatgaggcgcaactctcctcatttctgccg
gcgatccgcgacgggcgactggacttcgcgattggtacgctcagcgacgaaatgaaattg
caggatctgcacgtcgagccgctctttgagtcggagttcgtgctggtggcgaataagtcc
cgaacatgcaccggcaccaccacgctggaatcgttgcagaacgaacagtgggtgttgcca
caaacgaatatgggctactacagcgaactcctcaccaccctgcaaagaaatggcatcagc
atcgaaaacatcgttaaaaccgactcggttgtgaccatttataatcttgttctcaatgct
gattttctgacagtgattccgtgcgatatggccgcaccatttggttcaaaccagtttatt
actctccctgtagaagaatcgttacccattgcgcgctatgccgcaatatggtcaaaaaac
tatcgtattaaaaaagccgcatctgttttggttgaattagccaaagagtattcatcttat
aaaggttgcagacgaaagcaattaattgaaatcaactaa
DBGET
integrated database retrieval system
