Citrobacter farmeri: CI104_14570
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Entry
CI104_14570 CDS
T05012
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_14570
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Other transcription factors
Others
CI104_14570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_4
GAF
AAA_5
AAA_2
PAS_8
AAA_16
AAA_7
HTH_50
PAS_7
PAS_9
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AST80208
LinkDB
All DBs
Position
complement(2938627..2940528)
Genome browser
AA seq
633 aa
AA seq
DB search
MAIAAADVPEYIRASWLRCGKIMQREFWALPHRAQGLTFDSICRRKTAMLTLGQAALEDA
WEYMTPRKCALFILDESACVLSRCGDQETLQRLARLGFTEGTYCAESIIGSCALSLASML
GQPVKTLPDHHFKQALGAWSFSSTPIFDNHGRLSGSIALGCPADDASPADLSLTLAIARE
VGNSLLTDSLLAESNRHLNQLYGLLESMDDGVMTWNAQGSLQFINAQAARLLHLDVTAAH
GKNLSELLTLPSVLLRAIRHQRPLHHVETTFESQHQFVDTVITLKPIVEAQGTSFILLLH
PMEKMRQLMTSQLGKVSHTFAQMAQDDPQTQRIVHFGRQAARGSFPVLLCGEEGVGKELL
SQAIHNASERAEGPYIAVNCQLYADQVRDFIASTADDDREGRLSRLELAHGGTLYLEKIE
YLAPELQSALLQVIKQGVITRLDARRVVPVDVKVIAATTVDLARLVEQNRFSRQLYYALH
AFEIMIPPLRQRRNSIPSLVNHRLRRLEKRFSTRLAMDDDVLTPLIACDWPGNDFELNSV
IDNTALRSENGRIHLNHLPEYLFNEHRASESATDRFSASVAFSDIEKDAIIHAARVTGGR
IQEMASLLKIGRTTLWRKMKQYNINAAHFKLSS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgccgcagcggacgtcccggaatatattcgcgcctcatggctgcgttgcgga
aaaattatgcagcgcgagttctgggcgctgccgcaccgggcgcaggggctgacgtttgat
tctatttgtcggcgcaagacggcgatgctcacgctcgggcaggcggcgctggaggatgcg
tgggaatacatgacgccacgaaagtgtgcgctgtttattcttgatgaaagcgcttgtgtg
ctcagccgctgtggcgatcaggagacgctccagcggctggcgcgtctcggttttactgag
ggcacctattgcgcggaaagcatcattggcagctgtgcgctgtcgctggcttccatgctg
ggacagccggtaaaaacgctacccgatcaccattttaaacaggcgctcggggcgtggagc
tttagctcgacgcccattttcgacaaccacggacgcctgtctggatctatcgcgctgggc
tgtccggcagacgatgcctcaccggccgatctgtcattgacgctggcgatcgcgcgagag
gtagggaactcgctgctcactgacagcctgcttgccgaatcgaaccgccatctcaatcaa
ctgtatggtttgctggaaagtatggatgacggcgtgatgacctggaacgcgcagggaagt
ctgcaatttatcaatgcgcaggcggcgcggttactgcatcttgacgtgacggctgcccac
ggcaaaaacctcagtgaactcctgacgctgcccagcgttctgctgcgtgcgatccgccat
cagcgcccgcttcatcatgttgaaacgacgtttgaaagccagcaccagttcgtcgatacg
gtgattaccctcaagccgattgtcgaagcgcagggcaccagttttatcctgctgctgcat
ccaatggagaagatgcgtcagttgatgaccagccagttgggtaaagtgagtcataccttc
gcgcagatggcgcaggacgatccgcaaactcagcgtatcgtccattttggccgtcaggcg
gcgcggggcagtttcccggtattgttatgtggtgaagaaggggtcggcaaggagttgctc
agtcaggcaatccataacgccagcgaacgggcagagggcccctatattgcggtgaactgt
caactgtatgccgatcaggtgcgggattttatcgccagcacggcggatgacgacagagaa
gggcgattaagccgcctggaactggcgcacggcggcacgctgtatctggagaaaattgag
tatctggcacccgagctacagtcggcgttattacaagtgatcaaacaaggggtcatcacc
cgtcttgacgcgcgccgcgtggtgccagtcgacgtgaaggtgattgccgccacgacggtg
gatttggcgcggctggtggaacaaaaccgctttagccgccagctctattatgcattgcac
gcctttgaaattatgattccaccgctgcgacagcgacgtaacagtatcccttccctggtg
aatcaccgtttgcgtcgcctggaaaaacgcttttcgactcgtctggctatggatgatgat
gtactgaccccgctgattgcctgcgactggcccggtaatgatttcgagctcaacagtgtt
atcgacaatacggcactgagaagtgaaaacggacgtattcacctgaaccatctgccggaa
tatctctttaacgagcaccgggcctcagaatccgcgaccgatcgcttctctgccagcgtc
gcgttcagcgacattgagaaagatgccattattcatgcggcaagggtgaccggagggcgt
attcaggagatggccagcctgctgaaaattggccgtaccacgttatggcgaaaaatgaag
caatacaatattaacgcggcgcattttaagttgagctcctga
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