Cellulomonas fimi: Celf_0993
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Entry
Celf_0993 CDS
T01490
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Celf_0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfi03021
]
Celf_0993
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_0993
Enzymes [BR:
cfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Celf_0993
Transcription machinery [BR:
cfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Celf_0993
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Celf_0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEE45130
UniProt:
F4H1W0
LinkDB
All DBs
Position
1093134..1096640
Genome browser
AA seq
1168 aa
AA seq
DB search
MAASRTPSAPTADAIANRTASRRISFAKIHEPLEVPDLLGLQTESFDWLLGNERWQARVA
AALEAGRQDVPETAGLEEIFEEISPIEDFGGSMSLSFREHRFEPPKYTAEECKEKDFTYA
APLFVTAEFVNYTTGEIKSQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERM
ADKTSDKDILTAKVIPSRGAWLEFEIDKRDNVGVRVDRKRKQNATVLLKALGMTEAEIRE
EFAAYPAVIETLEKDHVQTQDEALLDLYRKIRPGEPPTVEAGRALIENFYFNPKRYDLAK
VGRYKLNKKLGQDAPLADSVLTLADVVATIKYLASLHIDLPTLPGTRAGEAIEIRVETDD
IDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLASFGRINPFGFVETPYRKVVDGRVTDEVHYLTADDEDRHVIAQANAPLL
EDGTFEEDRVLVRVKGGEIEYVTGENIDYMDVSPRQMVSVATALIPFLEHDDANRALMGA
NMQRQAVPLVRSEAPLVGTGMERRAAVDAGDVIVATKPGVVTEVSADLIVTANDDATTST
YRVAKFRRSNQGTSYNQRVLVDTGARVEVGSVLADGPATDEGELALGRNLLVAFMSWEGH
NYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGI
IRIGAEVAAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIE
VRTFSREDGDELPAGVNELVRVYIAQRRKITDGDKLAGRHGNKGVISKILPVEDMPFLAD
GTPVDVVLNPLGVPGRMNVGQVLETHLGWVAKQGWDIELAEGDVSWREGVPAVAAKSPAG
NPVATPVFDGVPEETLTGLLGSTLPNRDGERTVQQDGKARLFDGRSGEPFPDPVAVGYMY
ILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELL
TIKSDDVPGRVKVYEAIVKGENIPDSGIPESFKVLLKEMQSLCLNVEVLSSDGVSIDMKE
NDDEVYRAAEELGIDLSRRPNASSIEEI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcctcgcgcaccccttctgcaccgaccgctgacgccatcgcgaaccgcaccgca
tcccgtcgcatctccttcgccaagatccacgagccgctcgaggtccccgacctgctcggt
ctgcagaccgagagcttcgactggctgctcggcaacgagcgctggcaggcccgcgtggcc
gccgccctcgaggccggccgccaggacgtccccgagacggccgggctggaggagatcttc
gaggagatctcgccgatcgaggacttcggcgggtccatgtccctctcgttccgcgagcac
cgcttcgagccgccgaagtacacggccgaggagtgcaaggagaaggacttcacgtacgcg
gcgccgctgttcgtcaccgccgagttcgtcaactacacgaccggtgagatcaagagccag
acggtcttcatgggcgacttcccgctcatgacggagcgcggcacgttcatcatcaacggc
accgagcgcgtcgtcgtctcgcagctcgtccggtcgcccggcgtgtacttcgagcgcatg
gccgacaagacgtccgacaaggacatcctcacggccaaggtcatcccgagccgtggcgcg
tggctcgagttcgagatcgacaagcgcgacaacgtcggcgtccgcgtcgaccgcaagcgc
aagcagaacgcgaccgtcctgctcaaggcgctgggcatgaccgaggcggagatccgcgag
gagttcgccgcgtacccggccgtcatcgagacgctcgagaaggaccacgtccagacgcag
gacgaggcgctgctcgacctctaccgcaagatccgcccgggcgagccgccgaccgtcgag
gccggccgcgcgctcatcgagaacttctacttcaaccccaagcgctacgacctggcgaag
gtcggccgctacaagctgaacaagaagctcggccaggacgcgcccctcgcggactcggtc
ctgacgctcgcggacgtcgtcgcgacgatcaagtacctcgcgtcgctgcacatcgacctg
cccacgctgcccggcacgcgggccggcgaggcgatcgagatccgcgtcgagacggacgac
atcgaccacttcggcaaccgccgcatccgtgcggtcggcgagctcatccagaaccaggtc
cgcacgggcctgtcccggatggagcgcgtcgtgcgcgagcgcatgacgacgcaggacgtc
gaggccatcacgccgcagacgctcatcaacatccgtcccgtcgtcgcctccatcaaggag
ttcttcgggacgagccagctgtcgcagttcatggaccagaacaacccgctcgcgggcctg
acgcacaagcggcgtctgtcggccctcggcccgggtggtctgtcccgcgaccgcgccggc
atggaggtccgcgacgtccacccgtcgcactacggccgcatgtgcccgatcgagacccct
gagggtccgaacatcggcctcatcggctcgctcgcgtcgttcgggcggatcaacccgttc
ggcttcgtcgagacgccctaccgcaaggtcgtcgacggccgcgtgaccgacgaggtgcac
tacctcacggccgacgacgaggaccgtcacgtcatcgcgcaggcgaacgcgccgctcctc
gaggacggcacgttcgaggaggaccgcgtcctcgtccgcgtcaagggcggcgagatcgag
tacgtcaccggcgagaacatcgactacatggacgtctccccgcgccagatggtgtcggtc
gcgacggccctgatcccgttcctcgagcacgacgacgcgaaccgtgccctcatgggcgcc
aacatgcagcgccaggccgtgccgctggtccgctccgaggcgccgctcgtcggcaccggc
atggagcgtcgtgcggcggtcgacgcgggcgacgtcatcgtcgcgacgaagccgggtgtc
gtcacggaggtgtcggcggacctcatcgtcaccgccaacgacgacgcgaccacgtcgacg
taccgcgtggcgaagttccgccgctcgaaccagggcacgtcctacaaccagcgcgtgctg
gtcgacaccggcgcgcgcgtcgaggtcggctcggtgctcgcggacggcccggcgacggac
gagggcgagctcgcgctcggccgcaacctgctcgtcgcgttcatgtcgtgggagggccac
aactacgaggacgcgatcatcctgtcgcagcgcctcgtgcaggacgacgtgctgtcctcg
atccacatcgaggagcacgaggtcgacgcgcgcgacaccaagctcggccccgaggagatc
acgcgggacatcccgaacgtctccgaggaggtcctcgcggacctcgacgagcgcggcatc
atccgcatcggcgccgaggtcgcggcgggcgacatcctcgtcggcaaggtcaccccgaag
ggcgagaccgagctgacccccgaggagcgtctgctccgcgcgatcttcggcgagaaggcg
cgcgaggtccgcgacacgtcgctcaaggtgccgcacggcgagtccggcacggtcatcgag
gtgcgcacgttcagccgcgaggacggcgacgagctgcccgccggcgtgaacgagctggtc
cgcgtgtacatcgcgcagcgccgcaagatcacggacggcgacaagctcgccggtcgtcac
ggcaacaagggcgtcatctcgaagatcctccccgtcgaggacatgccgttcctcgcggac
ggcacgccggtcgacgtcgtgctcaacccgctgggtgtgcccggtcgtatgaacgtcggg
caggtcctcgagacgcacctcgggtgggtcgcgaagcagggctgggacatcgagctggcc
gagggtgacgtgtcgtggcgcgagggcgtcccggcggtcgccgcgaagtcgccggccggc
aacccggtcgcgacgccggtgttcgacggcgtgccggaggagaccctcacgggtctgctc
ggctcgacgctgccgaaccgtgacggcgagcgcaccgtgcagcaggacggcaaggcgcgc
ctgttcgacggccgctccggcgagccgttcccggacccggtcgcggtcggctacatgtac
atcctcaagctgcaccacctggtcgacgacaagatccacgcccgctcgaccggcccgtac
tcgatgatcacgcagcagccgctgggtggtaaggcgcagttcggcggtcagcggttcggc
gagatggaggtgtgggccctcgaggcgtacggcgccgcctacacgctccaggagctcctc
accatcaagtccgacgacgtgccgggccgcgtgaaggtctacgaggccatcgtcaagggc
gagaacatccccgactcgggcatcccggagtccttcaaggtcctcctcaaggagatgcag
tcgctctgcctgaacgtcgaggtgctgtcgtccgacggcgtgtccatcgacatgaaggag
aacgacgacgaggtctaccgcgccgcggaggagctcggcatcgacctgtcgcgtcgcccc
aacgccagcagcatcgaagagatctga
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