Cellulomonas fimi: Celf_1166
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Entry
Celf_1166 CDS
T01490
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03420
Nucleotide excision repair
cfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Celf_1166
03430 Mismatch repair
Celf_1166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_1166
Enzymes [BR:
cfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Celf_1166
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Celf_1166
MMR (mismatch excision repair)
Other MMR factors
Celf_1166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEE45301
UniProt:
F4H380
LinkDB
All DBs
Position
1269899..1273399
Genome browser
AA seq
1166 aa
AA seq
DB search
MSLLPAARIAALVGQPPPTPEQERVVEAPLSPALVVAGAGSGKTETMAARVVWLLANGLV
APEQVLGLTFTRKAAAELAERVRRRLRRLARAAAQEGVELPGGAALAGTTGDVLGSLARP
TVATYNAYASSLVTDHALRLGLDPSARLLGEAAQWQLAHEVVEAWTGDVDTDAAVSTVVD
AVLSLCGALDEHLLTPAQAQSGIAEIVEAIAATPDGPGRRREPYRDVQALVRLLGERSRV
LDLVAEYRERKRAADAIDFGDQVALAARLARDVPEVAAGERDRFRVVLLDEYQDTSYAQL
TLLGALFGDGHPVTAVGDPHQSIYGWRGASAGGLESFPTSFPAVDADGRRRPADVHVLST
SWRNDRRILDAANVVAGPLRAAAARVEVPVLAARPGAGDGRVHAHVADTVEDEARAVAEF
VAARWRPASPGTERVTAAVLCRKRSQFPAVQRALRAAGLPVEVVGLGGLLATPEVVDLVA
ALQAAHDPSRGDALMRLLTGGRTRLGAADLHALGAWADELAGRAGRRAGRDTGVQADVVD
ERSIVDALDDLPRSGWRSRNGRELSDAGRARLAELARLLTALRSHTYLAVPELVAEAERL
LGLDIEVAARAGTTPGRARANLDAFRDVAVEFARTADHPTLGGFLTWLDAAEVRESGLDM
PVAEPDPDAVQVITIHAAKGLEWDVVAVAGLVDGILPATRTRGQDGPKDSAWLTGLGTLP
YPLRGDRHDLPVLAYAGAADHKDLDERRKQFLLDAGLHQVAEERRLAYVALTRARSDLLL
TAAWWGDSARPRELSSFLEELAEAGVVGSGSWVERPEQGVGNPRDELVLTAQWPADPFAV
DGGPGRRPAVEAAATLVRDALAAGADSSGQPGGSRWEDLADRLLAEQERVRRPERGVELP
AHLSASSLVRLHADPAEFARGLRRPVPREPSPQARRGTRFHAWVEGWYGAATLVDLDALP
GADDDSDLVDLEEAALRASFLRTPWADRSPLAIEVDVETSVDGYVLRSRIDAVFADDEAG
REAAPQPAGAGAGAAVRPVVVVDWKTGAPPSDPAARASRELQLAVYRLAWSRWTGTPLDL
VRAAFCYVGTGETVYPERLLAEPEITDLLRRATAASAQAPGDGPARGVGRTRSAPSNVDR
GGANPAVPGRATESQSRRAPAPPDRP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcccgccgcccgcatcgccgcgctcgtcggccagccgccgccgaccccc
gagcaggagcgcgtcgtcgaggcgccgttgtccccggcgctcgtcgtcgccggtgcggga
tccggcaagaccgagacgatggcggcgcgcgtggtctggctgctcgcgaacgggctggtc
gcgcccgagcaggtgctggggctgaccttcacccgcaaggccgcggcggagctcgccgag
cgcgtgcggcggcggcttcgccggctcgcccgggcggcggcgcaggagggcgtcgagctg
cccggcggtgccgcgctcgccgggaccacgggcgacgtgctcggcagcctcgcccggccg
acggtcgcgacgtacaacgcgtacgcgtcgtcgctcgtcaccgaccacgcgctgcggctc
ggcctcgacccgtccgcgcgcctgctcggcgaggcggcgcagtggcagctcgcgcacgag
gtcgtcgaggcgtggacgggcgacgtcgacaccgacgcggccgtctcgaccgtcgtcgac
gccgtgctgtcgctgtgcggcgcgctcgacgagcacctgctgacgcccgcgcaggcgcag
agcgggatcgccgagatcgtcgaggccatcgcggcgacgcccgacggaccgggccggcgc
cgggagccgtaccgtgacgtgcaggcgctcgtgcggctgctcggcgagcgctcgcgcgtg
ctcgacctcgtcgccgagtaccgcgagcgcaagcgcgcggcggacgcgatcgacttcggg
gaccaggtcgcgctggcggcccggctggcccgcgacgtgccggaggtcgcggccggtgag
cgcgaccggttccgggtcgtgctgctcgacgagtaccaggacacgtcctacgcgcagctg
accctgctcggcgcgctgttcggcgacgggcaccccgtcacggccgtcggcgacccgcac
cagtcgatctacggctggcgcggcgcgagcgcgggcggcctcgagagcttcccgacgtcg
ttcccggcggtcgacgcggacggccgccgccggcccgccgacgtgcacgtgctgtcgacg
tcgtggcgcaacgaccgtcgcatcctcgacgccgcgaacgtcgtcgccgggccgttgcgc
gccgccgccgcgcgcgtcgaggtgccggtgctcgcggcccggcccggggcgggtgacgga
cgcgtgcacgcgcacgtcgcggacacggtcgaggacgaggcgcgcgcggtcgcggagttc
gtggctgcgcggtggcgtcccgcgtcgcccgggacggagcgcgtgaccgcggccgtgctg
tgccgcaagcgttcgcagttcccggcggtccagcgcgcgctgcgcgccgccgggctcccc
gtcgaggtcgtcgggctcggcgggctgctggcgacgcccgaggtcgtcgacctggtcgcc
gccctgcaggccgcgcacgacccgtcgcgcggggacgccctcatgcggctgctcaccggg
ggccgcacgcgcctgggcgcggccgacctgcacgcgctcggggcctgggccgacgagctc
gcggggcgtgccggtcgccgcgcggggagggacacgggtgtgcaggcggacgtggtcgac
gagcgcagcatcgtcgacgcgctcgacgacctgccccgctccgggtggcgcagccggaac
ggccgcgagctcagcgacgcgggccgcgcccgcctggccgagctcgcccggctgctgacg
gccctgcggtcgcacacctacctcgccgtccccgagctggtcgccgaggccgagcgcctg
ctgggactcgacatcgaggtcgcggcccgcgcgggcacgacccccggccgggcgcgggcc
aacctcgacgcgttccgcgacgtcgcggtcgagttcgcgcgcaccgcggaccacccgacc
ctcggcggcttcctcacgtggctcgacgcggcggaggtgcgcgagagcggcctcgacatg
cccgtcgccgagcccgacccggacgcggtgcaggtcatcacgatccatgccgccaagggg
ctcgagtgggacgtcgtcgcggtggccgggctcgtggacggcatcctgcccgcgacgcgc
acgcgcgggcaggacggcccgaaggactcggcgtggctcaccgggctcggcacgctgccg
tacccgctgcgcggtgaccgtcacgacctgcccgtcctagcgtacgccggcgcggcggac
cacaaggacctcgacgagcggcgcaagcagttcctcctcgacgcgggcctgcaccaggtg
gccgaggagcgtcgcctcgcctacgtcgcgctcacgcgcgcgcgcagcgacctgctgctc
accgcggcgtggtggggcgactcggccaggccgcgtgagctctcgtcgttcctcgaggag
ctcgccgaggcgggcgtcgtcgggtccgggtcgtgggtcgagcggcccgagcaaggcgtc
ggcaacccgcgcgacgagctcgtgctgaccgcgcagtggcccgccgacccgttcgcggtc
gacggcggcccgggtcggcgccccgccgtcgaggcggcggccacgctcgtgcgcgacgcc
ctcgcggcgggcgcggactcgagcgggcagcccggcgggtcgcggtgggaggacctggcg
gaccggctgctcgcggagcaggagcgggtgcggcgcccggagcgcggcgtcgagctgccc
gcgcacctgtccgcgtcgtcgctcgttcgcctgcacgccgacccggcggagttcgcgcgc
ggcctgcgccgcccggtcccgcgcgagccgtccccccaggcccggcgcggcacccgcttc
cacgcctgggtcgagggctggtacggggcggcgacgctcgtcgacctcgacgcgctgccg
ggggccgacgacgactcggacctggtcgacctggaggaggcggccctgcgcgcgtccttc
ctgcgcacgccgtgggcggaccgcagcccgctggcgatcgaggtggacgtcgagacgtcg
gtcgacggctacgtgctgcgctcgcggatcgacgccgtgttcgccgacgacgaggccggg
cgcgaggccgcgccgcagcccgccggagcgggcgccggcgcggccgtgcggcccgtcgtc
gtggtcgactggaagacgggcgcgccgccgtccgacccggcggcgcgcgcgtcccgcgag
ctgcagctcgccgtctaccggctcgcgtggtcgcgctggacgggcaccccgctggatctc
gtgcgcgccgcgttctgctacgtggggacgggggagaccgtgtacccggagcggctgctc
gcggagcccgagatcacggacctgctgcgccgcgcgacggccgcgtccgcgcaggcgccg
ggggacggaccggcccgtggcgtcgggcgcacccgctcggcgccgtccaacgtggaccgc
ggcggtgccaacccggccgtccccgggcgtgcgaccgagtcgcagtcccggcgtgcaccg
gcgccgccggaccgcccgtag
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