Chitinophaga filiformis: MYF79_04955
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Entry
MYF79_04955 CDS
T08225
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MYF79_04955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_04955
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MYF79_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UPK70646
LinkDB
All DBs
Position
1186045..1186842
Genome browser
AA seq
265 aa
AA seq
DB search
MRAVWSGTIGFGLVNIPIKLYSAVQDSRLDLDMLDKKDHAHIKFKRVNEDTGKEVPWEQI
VKGYLYNDEYVILEDEDFQEAAPEKSKIITIESFVDQAEIDDIYFETPYYIEPDKAGVKA
YELLLKTLQKTGKAGLGRFVLRTSEHLVIIRPRDNYLMLQQLRFEQEIRSPEELSLPSDS
KISKRELDMAVQLVDSYTTEFDISQFKDTYHEELLKIIKAKASGKRRTVKKMKIVHTKSS
DLFDQLKASLGGNGRNGSSNKKRAS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtttggtcaggaacaatcggttttgggttggtgaatatacccatcaaattg
tacagcgcagtacaggacagcagactggacctggacatgctggataaaaaagatcacgcc
catattaagtttaaacgtgtgaatgaagacacgggaaaggaagtgccctgggaacagatc
gtgaaaggatacctgtacaacgatgaatatgttatcctggaagacgaagattttcaggag
gccgcgccagaaaaaagcaagatcatcacgattgaatcttttgtggatcaggcggagata
gatgacatttattttgagacgccttactatatagaaccggacaaagcgggcgtgaaagca
tatgaactcttgttaaaaactttgcagaaaacaggtaaggccggactggggcgttttgta
ctcagaacgagtgaacatctcgtcattatccgaccgcgtgataattacctgatgttgcaa
caattgaggtttgaacaggaaatacgttcgcccgaagaattatctcttccttccgatagc
aagatcagcaaacgagaactggatatggccgtgcaactggtagacagttatactactgaa
tttgacatcagccagtttaaagatacttatcatgaagaactgttgaagatcattaaagcc
aaggccagcggtaagcgtcgtactgtaaagaagatgaagatcgtacatacgaaaagttct
gacctgttcgaccagctgaaggccagtcttggcggtaacggccgcaacggcagcagtaat
aaaaaacgtgcatcatga
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