Cellulomonas flavigena: Cfla_1540
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Entry
Cfla_1540 CDS
T01230
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
cfl
Cellulomonas flavigena
Pathway
cfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cfla_1540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfl03400
]
Cfla_1540
Enzymes [BR:
cfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cfla_1540
DNA repair and recombination proteins [BR:
cfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cfla_1540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
PknG_rubred
Motif
Other DBs
NCBI-ProteinID:
ADG74438
UniProt:
D5UDA1
LinkDB
All DBs
Position
complement(1711077..1711895)
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AA seq
272 aa
AA seq
DB search
MPEGDVLRRTAAHLDRALAGRRLVRADLRWPTAATVDLVGRTVLGTRPYGKHLLTRFDDG
RTLHTHLRMDGTWRLVPSTDRRAAARSPEVRAVLASDGWTAVGYRLGMLDVVPTSTEGTL
LGHLGPDVLDGDFDTTPGVPWAGPPVLDLPVPGIDEALRRWAAQGPRPVAEVLLDQRVVV
GIGTIFMAESLFARGWWPWAPADRVTDAAEVLRAARALLRESVATGRPASAVYGREGRTC
TRCGARVARHDVGAPPTQRQAYWCPGCQVRGR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggtgacgtcctgcgccgcaccgccgcgcacctcgaccgcgccctcgcaggc
cgcaggctcgtgcgggcggacctccgctggccgaccgccgcgaccgtggacctcgtcggc
cgcacggtgctggggacccgcccctacggcaagcacctgctgacgcggttcgacgacggg
cgcacgctgcacacgcacctgcggatggacggcacgtggcggctcgtgcccagcacggac
cgccgggccgcggcacgctcgcccgaggtgcgcgcggtgctcgccagcgacgggtggacg
gcggtcggctaccgcctgggcatgctcgacgtcgtgcccacgagcaccgagggcacgctc
ctggggcacctcggccccgacgtgctggacggcgacttcgacaccacgcccggcgtgccg
tgggcgggaccgcccgtgctggacctgccggtcccggggatcgacgaggcgctgcgccgc
tgggccgcacaggggccgcggcccgtggcggaggtgctgctcgaccagcgcgtcgtcgtc
ggcatcgggacgatcttcatggccgagtcgctgttcgcgcgcgggtggtggccgtgggcg
ccggccgaccgggtcacggacgcggccgaggtgctgcgcgctgctcgcgcgctgctgcgg
gagtcggtggccaccgggcggccagcgtcggccgtctacggacgggagggacggacgtgc
acgcgctgcggtgcacgagtggcacgtcacgacgtcggggcaccgccgacgcagcggcag
gcgtactggtgccccgggtgtcaggtgcgcggccgatag
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