Clostridium formicaceticum: BJL90_15395
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Entry
BJL90_15395 CDS
T05005
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfm03032
]
BJL90_15395
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_15395
Enzymes [BR:
cfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJL90_15395
DNA replication proteins [BR:
cfm03032
]
Prokaryotic type
DNA Topoisomerases
BJL90_15395
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJL90_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Motif
Other DBs
NCBI-ProteinID:
AOY77110
UniProt:
A0A1D9FPI6
LinkDB
All DBs
Position
complement(3335199..3337385)
Genome browser
AA seq
728 aa
AA seq
DB search
MQSKLSHLNVIETLEKNYMPYSMSVIVSRALPEIDGLKPSHRKLLYTMFKMGLLKGSKTK
SANIVGQTMKLNPHGDGAIYETMVRLTRGNEALLHPLIDSKGNFGKNYSREMAYAAPRYT
EAKLEEVCEEFFKDIHKDTVDFVPNYDNTIEEPKLLPTTFPNILVNPNLGIAVGMASAIC
SFNLQEVCEATIAFLKNEEVDITQYLKAPDFSSGGQFIFNESELKAIYDTGKGSFHLRGR
YRYDKQNNCIEIYEIPYTTTIEAIIEKIIELVKSGRIKEINDIRDETDKEGLKITLDLKR
NTDADHLMNRLYKMTTLQDTFSCNFNILIHGNPMLLGVKQILKEWTIFRVDCIKRQLTFD
IHQKQQRLHLLNGLEKILLDIDRAVKIVKDTKKDKEVIPNLMKGFEVDKIQAEFIADIKL
RNFNQEYILNKTKDIKNLEKEIKSLDITLKNEGKINKVIIKELEEIAKKYGKPRKTEIIE
EKYIEVVKEELLIEDYNIKLFLTSENYLKKISLASLRSSSNGHKLKDDDFIIQEIDGSNK
SDLLMFSNKHVVYKIRCYELEDKKTSSLGDYLKNLLSLADDEKIIYMTATEDYKGHMLFF
YKNGKAAKISLESYQTKTNRKQLANAYANEAELVHIEYIKEDKELVAVSSIKKVLVFHTN
QISVKTTRNSVGVQVLKSKNSSTLSKVKALENTAFEDIDYYRGNIPAIGTFLRKEDHLEK
EEKNLSFI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctaaattaagccacttaaatgtaatagaaaccttagagaaaaactatatgcct
tattccatgagtgttattgtctcaagagcattgcctgaaattgatggattaaaaccatct
catcgcaaactgctctacaccatgtttaaaatggggctgctcaagggatctaaaacaaaa
tcagcaaacatcgttggacaaaccatgaagctcaatccccatggagatggcgccatctac
gaaaccatggtacgtctaacgagaggaaacgaagcgctattacatcctcttattgatagc
aaaggtaactttgggaaaaactattctagagaaatggcgtatgcagcaccacgatatacc
gaagctaaactagaagaagtttgtgaagaattttttaaggatattcataaggatacggta
gactttgtacccaactatgacaatacaatagaagaacctaagttactacctactaccttt
ccaaatattcttgtaaatcctaacttaggaattgctgtaggtatggcaagtgccatatgc
agttttaatttgcaagaagtatgtgaagcaacgattgcattcctaaagaatgaagaagta
gatattacccaatatttaaaagcccctgatttctcatcaggaggacagtttatctttaac
gaatcagagcttaaggccatctatgataccggcaagggtagttttcatttgaggggaaga
tatcggtatgataagcaaaataactgtatagaaatctacgaaatcccttacaccaccacc
atagaggcgattatagaaaaaattattgagctggttaaatcaggaagaattaaagaaatc
aatgatataagagatgaaactgataaagaaggtttaaaaatcaccctagacctaaaaaga
aataccgatgccgatcatttgatgaaccgattgtacaaaatgacaacattacaagataca
tttagctgtaactttaatatcttgattcatggtaatcctatgcttttaggcgtaaaacaa
atcctgaaggaatggacaatctttagagtggattgtataaaaagacaactaacctttgat
attcatcaaaagcaacaaaggctacatctgctaaatggcctggagaaaattctcttagat
atagatcgggcagtaaaaatcgttaaggacacaaaaaaagataaggaagttataccaaat
ttaatgaagggctttgaagtagacaagatccaagctgaatttattgcagatatcaagtta
agaaacttcaaccaagagtacattctaaataaaaccaaagatattaaaaacttagaaaag
gaaattaaaagtcttgatatcaccttaaaaaatgaaggcaaaatcaacaaagtcattatc
aaagaactagaagagatagcaaaaaaatatggaaaacctagaaaaacagaaatcattgaa
gaaaagtatatagaagtagttaaagaggagcttttaattgaggactataatataaagttg
tttttaaccagtgaaaactatcttaaaaagatatctttagcctccttaagaagcagtagt
aatggccataaattaaaagatgatgattttattattcaagaaattgatggcagcaataaa
tcagatctactaatgttctccaacaaacacgtagtttataaaataagatgctatgaacta
gaggataaaaagaccagcagcctaggtgattatttaaaaaatctactgagtttagctgat
gatgaaaaaatcatctatatgacagccaccgaagactacaaaggacatatgctgtttttt
tataaaaatggcaaggcagctaaaatttcgctggaaagctatcaaaccaaaaccaataga
aaacaattggcaaatgcttacgctaatgaagctgagttggtacatattgaatatattaaa
gaagataaagagttagtcgccgtaagcagtatcaagaaagttttggtttttcataccaat
caaatcagtgtaaaaaccaccagaaactccgttggggttcaagtactaaagtctaaaaat
agcagtaccttatcaaaagttaaggccttagaaaatactgcctttgaagatatcgactat
tatcgcggcaatatacctgccatcggtacctttctcagaaaagaagatcatttagagaaa
gaagaaaaaaacttaagttttatatag
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