Camponotus floridanus (Florida carpenter ant): 105252519
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Entry
105252519 CDS
T03919
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
cfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105252519
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105252519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105252519
04121 Ubiquitin system [BR:
cfo04121
]
105252519
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105252519
Enzymes [BR:
cfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105252519
Spliceosome [BR:
cfo03041
]
Complex B
Other components
Prp19 complex
105252519
Complex C
Prp19-CDC5 complex
105252519
Ubiquitin system [BR:
cfo04121
]
Ubiquitin ligases (E3)
U-box type E3
105252519
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
105252519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
eIF2A
U-box
Nup160
WD40_like
RMC1_N
Cytochrom_D1
Coatomer_WDAD
WDR54
PAS_11
Motif
Other DBs
NCBI-GeneID:
105252519
NCBI-ProteinID:
XP_011258220
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MYVCMHVCTYVCSTNHIKKMALSCAISNEVPEHPVVSPVSGSIFERRLVEKYVAENGVDP
INGKELTIEQLIDIKTTPIVKPKPPSATSIPAILKNLQDEWDAVMLHSFTLRQQLQTARQ
ELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQAATIPQPAVAVEAGGTAAQ
PMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLMPQDSIRSFQTLASHPGLHSASV
PGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDVVMT
ASPDTTIRVWNVGTSQTTLLLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLL
TKVAGQTGQPLTTAQFHPDGLIFGTGTADSQVKIWDLKEQSNVANFPGHTGPITAISFSE
NGYYLATAAEDSCVKLWDLRKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRIYLC
KQWQELKVLNDHTAAATGVRFGKHAQYIASTSMDRTLKLYGLS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtatgtatgcacgtatgtacatacgtatgtagtacaaatcatatcaagaaaatg
gcgctttcttgtgctatttctaatgaggtaccggagcatccagtagtatcccctgtttct
ggatcaatatttgaaaggcgtcttgttgaaaaatatgtagctgagaatggagtggatcct
attaatggcaaagaacttaccatcgaacagcttattgatatcaaaacaactccaattgtc
aaacctaaaccacctagcgcaacatccattccagcgatattaaagaacttacaagatgaa
tgggatgctgttatgttacattcatttacattgcgacaacaacttcaaactgcaagacaa
gaattgtctcatgcactttatcagcatgatgcagcttgtcgagtcattgctagattgaca
aaggaagttaccgctgctagagaagctctggccactctcaagccacaggctggaatcgtt
caagctgctacaatcccacaacctgctgtggcagtagaagctggtggcacagcagcccaa
ccaatggaacaggctggcatcactgaagatgtgattcagaaactacaggaacgagcgact
gtcctcactcaagagcgaaagcgacgtggacgttcagtgccagaagatttaatgcctcag
gatagtatccggtcattccaaactctcgcatcgcatcctggactgcattctgctagtgta
ccaggaatcttagcgctcgacattcatagcgcagataccagcaagattttaacgggtggc
gccgacaagaatgctactgttttcaacaaagacaccgaacaagtagtggcaattctcaaa
ggtcacacaaaaaaggttacacgcgttatctatcatccagaggaagatgtagtgatgacc
gcttcacccgatactacgattcgtgtatggaacgttggtaccagtcagacgactttatta
ctgaaggctcacgacgctccagtaaccggattatctctacatccgaccggtgattattta
ttgagctcgtctctggatcaacattgggccttctcggatatacgtaccggcagattatta
actaaagtggcaggacaaacgggacaaccgttgactacggcgcagtttcatcctgatggt
ctaattttcggtactggcacagcagattctcaagtgaaaatctgggacttgaaagaacaa
tctaacgttgcaaatttccctggtcatactggcccgatcacagcgattagtttctccgag
aatggatattatttggcaactgctgcggaggactcttgcgttaaactctgggatttacgc
aagctaaagaactttaagacgctgcaattggaggaatcttacgaagtaaaggacatttgc
ttcgaccaaagcggaacttatttagctgtagcagggacagacgtgaggatatatctttgt
aaacaatggcaagaattgaaagttttgaacgatcacacggcagcagctactggtgttcgt
tttggaaaacacgcgcaatacattgcatccaccagtatggacagaactctgaaactttat
ggcttgtcatag
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integrated database retrieval system
