Campylobacter fetus subsp. testudinum pet-3: CR44_01775
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Entry
CR44_01775 CDS
T03583
Name
(GenBank) UvrABC system subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cfp
Campylobacter fetus subsp. testudinum pet-3
Pathway
cfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CR44_01775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfp03400
]
CR44_01775
DNA repair and recombination proteins [BR:
cfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CR44_01775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CR44_01775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
nSTAND3
APS_kinase
AAA_33
AAA_21
AAA_25
DUF5420
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AJB44995
LinkDB
All DBs
Position
complement(323126..325957)
Genome browser
AA seq
943 aa
AA seq
DB search
MRETIKITGAKEHNLKNISLEIPKNRLVVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSS
YARQFLDRVGKPDVDHIEGLTPAIAIDQKSTSKNPRSTVGTITEIYDYLRLLYARIGVQH
CHKCGKIVSKMSASDIIDQILKLPNDAKITILAPIVREKKGSFTDELESLANKGYVRAMI
DGVMVRLDEEIELSKTKKHTIKVVIDRVVISPENSSRIASDVEKALHESFGEVEIDISNA
EELSLEKSFIHFSEHNACFDCKISFNALEPLSFSFNSPKGACPSCDGLGIRFSLDLNKII
DENLSVEGGAIKVMYGFNKSYFYKFTLAFCEQNGINIKTPYYELSDDEKRLILYGNAKNI
DFLWKRHKISKTFDGVLKIAYEILKDDKDFSDYMTEKQCEVCNAKRLKQESLAVKVAEKT
IGDIIDMSIENCTKFFSDSSNFIHLNDQQKMIASPILKEINERLFFLYDVGLGYLSLGRD
ARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTLKLIKTLRSLQEKGNTVIV
VEHDKKTIEAADFIVDIGPGAGIHGGEVVFAGTYKELLRSNTQTANYINGTNSINYYKGR
KQSDFLSISNVNLNNISNLNVKFPLRNLVGVTGVSGSGKSSLVLQTLLPTALEELNRAKK
VQKIKGVKIEGLEYLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRGLFASTKEAKLRGYK
IGRFSFNVKGGRCEKCSGEGEIKVEMHFLPDINVVCDICKGSRYNAQTLEIEYKGKNIAE
VLNMSVDEALTFFKAVPKIYAKLKTISDVGLGYVTLGQPATTLSGGEAQRIKLSKELSRS
DTGNTLYVLDEPTTGLHFADVDRLVKVLHHLVDLGNSVIVIEHNLDVIKNCDYLIDMGPE
GGAGGGKVISKGTPIEVAKKYKKTGSFTGEFLENELKDMGLLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaactataaaaataacaggtgcaaaagagcacaatcttaaaaatatcagctta
gaaataccaaaaaaccgccttgtagtattcacaggacttagcggtagcggaaaaagtacg
ctcgcttttgacacactttacgcagagggtcaaagacgctatatagagagcctttcttct
tacgcaaggcagtttttagatagagtgggaaaaccagacgtcgatcacatcgaaggtctt
actcctgctatcgcaatcgatcaaaaatcaacaagtaaaaatcctcgctcaactgtagga
actataactgaaatttatgattatctaagacttttatacgctagaatcggagttcaacac
tgccataaatgcggtaaaatcgtctcaaaaatgagcgcaagtgatatcatagatcaaatt
ttaaaactaccaaatgacgctaagataacaatactggctcctatcgtacgcgaaaaaaag
ggaagttttacagacgaactagagagtcttgctaacaaaggctacgtaagagctatgata
gatggcgtaatggtaaggctagatgaagagatagaacttagcaaaaccaaaaaacacact
ataaaagttgtgatagatagagtagtcataagcccagaaaactcttcaaggatagcaagt
gacgtcgaaaaagcactccacgagagttttggcgaagtagagatcgatataagcaacgct
gaagagttaagcttagaaaagagttttatacactttagcgaacataatgcttgttttgat
tgtaaaatatcatttaacgctcttgaacccttaagctttagcttcaactctccaaaaggc
gcttgtcctagctgcgacggacttgggatccgttttagcttagatctaaacaaaatcatc
gatgaaaatctcagcgtagaaggtggtgctataaaagtgatgtatggatttaataagagt
tatttttataaatttacacttgctttttgcgaacaaaacggtataaatattaaaactcct
tactatgaattaagcgatgatgaaaagaggcttatactttacggaaatgctaaaaatata
gattttttatggaaaagacataagataagtaaaacttttgatggcgtcttaaaaatcgcc
tatgaaattttaaaagacgataaagattttagcgattatatgactgaaaaacagtgtgaa
gtttgtaacgctaagcgcctaaaacaagagagtttagcagtcaaagtcgctgaaaaaacc
ataggcgatatcatagatatgagtatcgaaaactgcactaaattttttagcgatagttca
aatttcattcatctaaatgatcagcaaaagatgatcgcctcgcctatcttaaaagagata
aacgaaagactattttttctttatgatgtcggacttggatatctaagtcttggtagagac
gctagaactataagtggtggtgaagcccaaagaattcgtatcgcaagccagataggaagc
ggacttagtggcgtaatgtacgtgcttgatgagcctagcataggacttcacgaaagagac
actttaaaactcataaaaacattaagaagcttgcaagaaaaaggaaatacagtaatcgta
gtcgagcacgacaaaaaaaccatagaagcggctgattttatcgtagatatcggtcctgga
gcaggaattcatggcggagaagttgtatttgcaggaacttacaaagagcttttaagatca
aacactcaaacagcaaactatataaacggtacaaactccataaactactacaaaggtaga
aaacaaagtgactttctaagcataagtaacgtaaatttaaataacatttcaaatttaaac
gtcaaatttccgcttagaaatttagtaggagtaacaggagtaagcggtagtggaaaaagc
tcactcgtactccaaactctacttccaactgctcttgaagagttaaatagagccaaaaaa
gtacaaaagataaaaggcgtcaaaatagaaggcttggaatatctcgataaagttatctac
cttgatcaaagccctatcggtcgtacgccacgcagcaaccctgcaacctatactggagtt
atggatgagataagagggctttttgcctctacaaaagaagcaaaactcagaggatacaaa
ataggaagatttagtttcaacgtaaaaggcggtagatgcgaaaaatgtagcggagaagga
gagataaaagtagaaatgcactttttaccagatatcaacgtagtttgtgatatctgcaaa
ggctctcgctacaacgcccagactttagagatagagtataaaggcaaaaatatagccgaa
gttttaaatatgagcgtagatgaagcgcttacttttttcaaagctgtaccaaaaatttat
gcaaaactaaaaactataagcgatgtcggacttggatacgtgactttaggtcagccagca
accactctaagcggcggcgaagcacaacgcataaagctttcaaaagaactcagcagaagc
gatactggaaacactttgtacgtgcttgatgagccaactactggccttcattttgccgat
gtggatagactagtaaaagtcttgcatcatttagtagatcttgggaattctgtcatagtc
atagaacataaccttgatgttataaaaaactgcgactatctgatagatatgggacctgag
ggcggagctggaggcggaaaagtgatctctaaaggaactcctatcgaagtagctaaaaaa
tataaaaaaacaggctcatttactggagagtttttagaaaacgaactaaaagatatgggg
cttttgaagtaa
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