Camelus ferus (Wild Bactrian camel): 102520022
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Entry
102520022 CDS
T02979
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102520022 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfr00536
]
102520022 (COL13A1)
Glycosaminoglycan binding proteins [BR:
cfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102520022 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102520022
NCBI-ProteinID:
XP_032347432
UniProt:
A0A8B8TYS7
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Position
11:49989102..50147619
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AA seq
814 aa
AA seq
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MVAERARKATAAGARGPGELGAPGTVALAVAPAERCARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLEEKWKLHSRRRREAPKMSPGCHCP
PGPPGPAGRPGLPGDKGAIGMPGRVGGKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGEMGLAGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGLKGDPGI
QGYHGRKGERGMPGMPGKQGAKGAPGIAVAGMKGEPGTPGAKGEKGAAGPPGLLGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGDAGADGHAGPPGRQGDKGEPGAAGEQGPAG
PKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEVGLP
GPPGHDGEKGPRGKPGDVGPPGPQGPPGKAGPAGMKGEDGPTGSPGEKGEKGETGQPGPP
GLDGPTGEKGEPGGQGRPGATGLPGPIGLPGFTGEKGEPGEKGDPGVEVPGPPGPEGPPG
PPGLQGIPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPG
PAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGHRGFKGEKGEPGLPGLDGLDA
PCPLVWHHPPSPAWPVWASPRVWFMPAASPAALHTSAPSTRSPLPTSSPWRHQGSACPGW
SSGAPATSPSCMQSLPRCFLGFLLQLLQKPVTLM
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgcgcccgcaaagcgacagccgccggtgcccgcggacctggggagctg
ggcgcgcccgggacagtggcgctggcggtggcgccggcggagcgctgcgcgcggctgccg
agcccggggtcgtgcgggctgctggcgctggccctttgctcgctggcgcttagcctgctc
gcccactttcggaccgccgagctgcaggcccgggtgctgcgcctggaagcggagcgtggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggaggagaaatgg
aagctccactctcggaggcgccgggaggccccaaagatgtctccaggatgtcactgccca
ccaggacctcctggtcctgctggaagacctggcctcccgggggacaaaggtgccattggg
atgcctggacgtgtgggaggaaagggccaaccaggtgagaagggggccccaggagatgcc
gggatgtccatcatcggtccccgtggccccccaggccagccgggcactcgaggttttcct
ggatttccgggtcccattgggcttgacggcaaaccgggccaccccggaccaaagggggag
atgggcctggcgggtcccccaggacagccgggacctcaaggacaaaaaggagaaaagggt
cagtgtggagagtacccacatcggctgctgcctctcctcaattcagtgcggctggctcca
cccccagtcattaaaaggcggaccttccagggtgaacagggccaggctggcattcaaggc
ccaccagggccaccaggccctcctggaccgagtggacctctggggcacccaggactgcca
gggcctatggggccacctggcttacctgggcctcctggactgaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgccgggcaaacagggc
gcaaagggggctcctggaatcgctgtggctgggatgaagggcgagccggggaccccagga
gccaagggtgagaagggggctgccggtccccctgggcttctcggcctcctggggcagaag
ggagaaaaaggtgatgctggcaactccattggaggaggccgaggggagcccggtccccca
gggctccctgggcccccagggccaaagggggatgctggagctgatggccacgccggcccc
ccaggacggcaaggagacaagggggagcccggagcagctggagaacaaggacctgctggc
cccaagggctccaagggcgaaccggggaagggagagatggtggactacaacggaaacatc
aacgaggctctccaggagatccggacgctggccttgatgggaccccctggtcttcccggg
caaattggcccacctggagctccagggattccaggacagaagggggaggttggactgcca
ggccctccaggacatgatggggaaaagggacctcgaggcaaaccaggagatgtgggccct
cctggtccccagggccccccaggaaaggctgggcctgcaggaatgaagggagaagacgga
cccacagggagcccaggagagaagggggagaaaggggagacggggcagccaggcccaccg
ggtctagacggcccaactggggagaaaggagaaccaggtggccaagggagacccggagcg
accggattgcctggcccaatcgggctcccaggatttacaggagagaaaggagaacccggg
gagaaaggtgacccaggagtggaggttcctgggccaccaggaccagaggggcctcctgga
cctccagggctccaaggcattcctggaccaaagggtgaagcaggactagatggagcaaaa
ggagaaaagggtgtccagggagaaaaaggagaccgaggtcctttgggattacccggagct
tcaggtttggacggcaggcctgggccaccgggtactccaggaccaattggagttccaggc
ccagcgggaccaaagggagagaggggcagcaaaggcgaccccgggatgacaggaccaacg
ggagcagctgggcttcctggtttgcacggaccacccggggataaaggcaaccggggacat
cgaggttttaaaggagagaaaggggagccggggttaccagggctggacggactggatgcc
ccgtgcccattggtatggcatcaccctccctcgcctgcatggccagtttgggcttcccca
cgtgtgtggtttatgcctgctgcctctccagctgccctccacacttctgctccatccacc
cggtctccacttcccacctcttcaccctggagacaccaagggtcagcctgccctggctgg
tcctcaggggctcccgccacatccccctcttgcatgcaaagtttgccaagatgctttctc
ggcttcctcctacagctgcttcaaaagcccgtcactttaatgtga
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